RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
APOC1-209ENST00000592885 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
APOC1-209ENST00000592885 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
APOC1-209ENST00000592885 CCDC88AQ3V6T2 1871 aa17.54■□□□□ 0.4
APOC1-209ENST00000592885 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
APOC1-209ENST00000592885 RBM46Q8TBY0 533 aaKnown RBP17.53■□□□□ 0.4
APOC1-209ENST00000592885 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
APOC1-209ENST00000592885 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
APOC1-209ENST00000592885 NFKBIEO00221 500 aa17.52■□□□□ 0.4
APOC1-209ENST00000592885 SOGA3Q5TF21 947 aa17.52■□□□□ 0.4
APOC1-209ENST00000592885 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.4
APOC1-209ENST00000592885 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
APOC1-209ENST00000592885 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.4
APOC1-209ENST00000592885 ERBB4Q15303 1308 aa17.51■□□□□ 0.39
APOC1-209ENST00000592885 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
APOC1-209ENST00000592885 SRGNP10124 158 aa17.51■□□□□ 0.39
APOC1-209ENST00000592885 APLP1P51693 650 aa17.51■□□□□ 0.39
APOC1-209ENST00000592885 EIF4A1P60842 406 aaKnown RBP17.51■□□□□ 0.39
APOC1-209ENST00000592885 MASTLQ96GX5 879 aa17.51■□□□□ 0.39
APOC1-209ENST00000592885 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
APOC1-209ENST00000592885 NUP98P52948 1817 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 FSTL1Q12841 308 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 TPTE2Q6XPS3 522 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 NIP7Q9Y221 180 aaKnown RBP eCLIP17.5■□□□□ 0.39
APOC1-209ENST00000592885 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
APOC1-209ENST00000592885 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
APOC1-209ENST00000592885 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
APOC1-209ENST00000592885 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
APOC1-209ENST00000592885 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
APOC1-209ENST00000592885 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
APOC1-209ENST00000592885 GLTPD2A6NH11 291 aa17.48■□□□□ 0.39
APOC1-209ENST00000592885 C21orf2O43822 256 aa17.48■□□□□ 0.39
APOC1-209ENST00000592885 PRELPP51888 382 aa17.48■□□□□ 0.39
APOC1-209ENST00000592885 PRPF40BQ6NWY9 871 aaKnown RBP17.48■□□□□ 0.39
APOC1-209ENST00000592885 NPR1P16066 1061 aa17.47■□□□□ 0.39
APOC1-209ENST00000592885 KIF6Q6ZMV9 814 aa17.47■□□□□ 0.39
APOC1-209ENST00000592885 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
APOC1-209ENST00000592885 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
APOC1-209ENST00000592885 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
APOC1-209ENST00000592885 RIPK4P57078 832 aa17.46■□□□□ 0.39
APOC1-209ENST00000592885 NYXQ9GZU5 481 aa17.46■□□□□ 0.39
APOC1-209ENST00000592885 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
APOC1-209ENST00000592885 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
APOC1-209ENST00000592885 CEP350Q5VT06 3117 aa17.45■□□□□ 0.38
APOC1-209ENST00000592885 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
APOC1-209ENST00000592885 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
APOC1-209ENST00000592885 HLFQ16534 295 aa17.45■□□□□ 0.38
APOC1-209ENST00000592885 VEGFAP15692 232 aaPredicted RBP17.44■□□□□ 0.38
APOC1-209ENST00000592885 CCDC93Q567U6 631 aa17.44■□□□□ 0.38
APOC1-209ENST00000592885 DPY19L2Q6NUT2 758 aa17.44■□□□□ 0.38
APOC1-209ENST00000592885 SMC1BQ8NDV3 1235 aa17.44■□□□□ 0.38
APOC1-209ENST00000592885 ERFEQ4G0M1 354 aa17.43■□□□□ 0.38
APOC1-209ENST00000592885 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
APOC1-209ENST00000592885 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
APOC1-209ENST00000592885 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
APOC1-209ENST00000592885 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
APOC1-209ENST00000592885 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
APOC1-209ENST00000592885 C7orf43Q8WVR3 580 aa17.42■□□□□ 0.38
APOC1-209ENST00000592885 MYL6BP14649 208 aa17.41■□□□□ 0.38
APOC1-209ENST00000592885 ALDH1B1P30837 517 aa17.41■□□□□ 0.38
APOC1-209ENST00000592885 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
APOC1-209ENST00000592885 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
APOC1-209ENST00000592885 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
APOC1-209ENST00000592885 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
APOC1-209ENST00000592885 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
APOC1-209ENST00000592885 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
APOC1-209ENST00000592885 FAM177BA6PVY3 158 aa17.39■□□□□ 0.37
APOC1-209ENST00000592885 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
APOC1-209ENST00000592885 PARP10Q53GL7 1025 aa17.39■□□□□ 0.37
APOC1-209ENST00000592885 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
APOC1-209ENST00000592885 ZBTB3Q9H5J0 574 aa17.39■□□□□ 0.37
APOC1-209ENST00000592885 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
APOC1-209ENST00000592885 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
APOC1-209ENST00000592885 SCN4AP35499 1836 aa17.38■□□□□ 0.37
APOC1-209ENST00000592885 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
APOC1-209ENST00000592885 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
APOC1-209ENST00000592885 SNED1Q8TER0 1413 aa17.38■□□□□ 0.37
APOC1-209ENST00000592885 PDIA6Q15084 440 aa17.37■□□□□ 0.37
APOC1-209ENST00000592885 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
APOC1-209ENST00000592885 PPP1R42Q7Z4L9 355 aa17.37■□□□□ 0.37
APOC1-209ENST00000592885 DNAJC5GQ8N7S2 189 aa17.37■□□□□ 0.37
APOC1-209ENST00000592885 POTECB2RU33 542 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 CHL1O00533 1208 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 NTSR2O95665 410 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 HOXB7P09629 217 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 GPTP24298 496 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
APOC1-209ENST00000592885 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
APOC1-209ENST00000592885 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
APOC1-209ENST00000592885 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
APOC1-209ENST00000592885 HSP90AB3PQ58FF7 597 aa17.35■□□□□ 0.37
APOC1-209ENST00000592885 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
APOC1-209ENST00000592885 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
APOC1-209ENST00000592885 PSMD1Q99460 953 aa17.35■□□□□ 0.37
APOC1-209ENST00000592885 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms