RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
RANBP3-229ENST00000592771 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
RANBP3-229ENST00000592771 TNS2Q63HR2 1409 aa17.46■□□□□ 0.39
RANBP3-229ENST00000592771 AOX1Q06278 1338 aa17.46■□□□□ 0.39
RANBP3-229ENST00000592771 ERBB4Q15303 1308 aa17.46■□□□□ 0.39
RANBP3-229ENST00000592771 COL16A1Q07092 1604 aaPredicted RBP17.46■□□□□ 0.38
RANBP3-229ENST00000592771 GOLGA6L22H0YM25 854 aa17.45■□□□□ 0.38
RANBP3-229ENST00000592771 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
RANBP3-229ENST00000592771 XAGE3Q8WTP9 111 aa17.45■□□□□ 0.38
RANBP3-229ENST00000592771 MX1P20591 662 aa17.45■□□□□ 0.38
RANBP3-229ENST00000592771 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
RANBP3-229ENST00000592771 DISP2A7MBM2 1401 aa17.44■□□□□ 0.38
RANBP3-229ENST00000592771 GRM8O00222 908 aa17.44■□□□□ 0.38
RANBP3-229ENST00000592771 IGKV5-2P06315 115 aa17.44■□□□□ 0.38
RANBP3-229ENST00000592771 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
RANBP3-229ENST00000592771 GRPEL1Q9HAV7 217 aa17.44■□□□□ 0.38
RANBP3-229ENST00000592771 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
RANBP3-229ENST00000592771 ARFGEF2Q9Y6D5 1785 aa17.44■□□□□ 0.38
RANBP3-229ENST00000592771 PLCH1Q4KWH8 1693 aa17.43■□□□□ 0.38
RANBP3-229ENST00000592771 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
RANBP3-229ENST00000592771 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
RANBP3-229ENST00000592771 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
RANBP3-229ENST00000592771 METTL22Q9BUU2 404 aaPredicted RBP17.43■□□□□ 0.38
RANBP3-229ENST00000592771 MYL6BP14649 208 aa17.43■□□□□ 0.38
RANBP3-229ENST00000592771 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
RANBP3-229ENST00000592771 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
RANBP3-229ENST00000592771 RHPN1Q8TCX5 695 aa17.42■□□□□ 0.38
RANBP3-229ENST00000592771 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
RANBP3-229ENST00000592771 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
RANBP3-229ENST00000592771 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
RANBP3-229ENST00000592771 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
RANBP3-229ENST00000592771 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
RANBP3-229ENST00000592771 NUCB2P80303 420 aa17.41■□□□□ 0.38
RANBP3-229ENST00000592771 CWC22Q9HCG8 908 aaKnown RBP17.41■□□□□ 0.38
RANBP3-229ENST00000592771 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
RANBP3-229ENST00000592771 CD2BP2O95400 341 aaKnown RBP17.41■□□□□ 0.38
RANBP3-229ENST00000592771 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
RANBP3-229ENST00000592771 ANKRD13DQ6ZTN6 518 aa17.41■□□□□ 0.38
RANBP3-229ENST00000592771 REC8O95072 547 aa17.4■□□□□ 0.38
RANBP3-229ENST00000592771 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
RANBP3-229ENST00000592771 SUCLG2Q96I99 432 aa17.4■□□□□ 0.38
RANBP3-229ENST00000592771 COL15A1P39059 1388 aa17.4■□□□□ 0.38
RANBP3-229ENST00000592771 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
RANBP3-229ENST00000592771 AFDNP55196 1824 aaKnown RBP17.39■□□□□ 0.38
RANBP3-229ENST00000592771 GCKRQ14397 625 aa17.39■□□□□ 0.37
RANBP3-229ENST00000592771 NUP188Q5SRE5 1749 aa17.39■□□□□ 0.37
RANBP3-229ENST00000592771 USP42Q9H9J4 1324 aaKnown RBP17.39■□□□□ 0.37
RANBP3-229ENST00000592771 CLCN1P35523 988 aa17.39■□□□□ 0.37
RANBP3-229ENST00000592771 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.37
RANBP3-229ENST00000592771 RRAGDQ9NQL2 400 aaPredicted RBP17.39■□□□□ 0.37
RANBP3-229ENST00000592771 LRP6O75581 1613 aa17.38■□□□□ 0.37
RANBP3-229ENST00000592771 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
RANBP3-229ENST00000592771 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
RANBP3-229ENST00000592771 TSHZ3Q63HK5 1081 aa17.38■□□□□ 0.37
RANBP3-229ENST00000592771 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
RANBP3-229ENST00000592771 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
RANBP3-229ENST00000592771 ST18O60284 1047 aa17.37■□□□□ 0.37
RANBP3-229ENST00000592771 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
RANBP3-229ENST00000592771 MYD88Q99836 296 aa17.37■□□□□ 0.37
RANBP3-229ENST00000592771 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
RANBP3-229ENST00000592771 ITGB4P16144 1822 aa17.37■□□□□ 0.37
RANBP3-229ENST00000592771 HSPA1LP34931 641 aa17.37■□□□□ 0.37
RANBP3-229ENST00000592771 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
RANBP3-229ENST00000592771 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
RANBP3-229ENST00000592771 ERC2O15083 957 aa17.36■□□□□ 0.37
RANBP3-229ENST00000592771 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
RANBP3-229ENST00000592771 ERC1Q8IUD2 1116 aa17.36■□□□□ 0.37
RANBP3-229ENST00000592771 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
RANBP3-229ENST00000592771 PANK2Q9BZ23 570 aa17.36■□□□□ 0.37
RANBP3-229ENST00000592771 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
RANBP3-229ENST00000592771 NUTM2BA6NNL0 878 aaPredicted RBP17.35■□□□□ 0.37
RANBP3-229ENST00000592771 NUTM2EB1AL46 878 aaPredicted RBP17.35■□□□□ 0.37
RANBP3-229ENST00000592771 BAG4O95429 457 aaKnown RBP17.35■□□□□ 0.37
RANBP3-229ENST00000592771 CYP2E1P05181 493 aaPredicted RBP17.35■□□□□ 0.37
RANBP3-229ENST00000592771 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
RANBP3-229ENST00000592771 NUTM2AQ8IVF1 878 aaPredicted RBP17.35■□□□□ 0.37
RANBP3-229ENST00000592771 TMOD3Q9NYL9 352 aa17.35■□□□□ 0.37
RANBP3-229ENST00000592771 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
RANBP3-229ENST00000592771 SSFA2P28290 1259 aa17.34■□□□□ 0.37
RANBP3-229ENST00000592771 TTC41PQ6P2S7 1318 aa17.33■□□□□ 0.36
RANBP3-229ENST00000592771 CHMLP26374 656 aa17.33■□□□□ 0.36
RANBP3-229ENST00000592771 CASP7P55210 303 aa17.33■□□□□ 0.36
RANBP3-229ENST00000592771 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
RANBP3-229ENST00000592771 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
RANBP3-229ENST00000592771 PA2G4Q9UQ80 394 aaKnown RBP17.33■□□□□ 0.36
RANBP3-229ENST00000592771 TJP1Q07157 1748 aa17.32■□□□□ 0.36
RANBP3-229ENST00000592771 PTCD1O75127 700 aaKnown RBP17.32■□□□□ 0.36
RANBP3-229ENST00000592771 MCM2P49736 904 aa17.32■□□□□ 0.36
RANBP3-229ENST00000592771 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
RANBP3-229ENST00000592771 RABL6Q3YEC7 729 aaPredicted RBP17.32■□□□□ 0.36
RANBP3-229ENST00000592771 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
RANBP3-229ENST00000592771 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
RANBP3-229ENST00000592771 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
RANBP3-229ENST00000592771 A1BGP04217 495 aa17.31■□□□□ 0.36
RANBP3-229ENST00000592771 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
RANBP3-229ENST00000592771 PIGBQ92521 554 aa17.31■□□□□ 0.36
RANBP3-229ENST00000592771 ADAMTS2O95450 1211 aa17.31■□□□□ 0.36
RANBP3-229ENST00000592771 BCL9O00512 1426 aa17.3■□□□□ 0.36
RANBP3-229ENST00000592771 JCADQ9P266 1359 aa17.3■□□□□ 0.36
RANBP3-229ENST00000592771 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms