RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRKCSH-215ENST00000592435 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-215ENST00000592435 CHL1O00533 1208 aa12.71□□□□□ -0.37
PRKCSH-215ENST00000592435 HLFQ16534 295 aa12.71□□□□□ -0.37
PRKCSH-215ENST00000592435 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-215ENST00000592435 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.37
PRKCSH-215ENST00000592435 ZNF622Q969S3 477 aaKnown RBP eCLIP12.71□□□□□ -0.37
PRKCSH-215ENST00000592435 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.38
PRKCSH-215ENST00000592435 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.38
PRKCSH-215ENST00000592435 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
PRKCSH-215ENST00000592435 SRGNP10124 158 aa12.7□□□□□ -0.38
PRKCSH-215ENST00000592435 MYL6BP14649 208 aa12.7□□□□□ -0.38
PRKCSH-215ENST00000592435 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
PRKCSH-215ENST00000592435 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
PRKCSH-215ENST00000592435 KLRG2A4D1S0 409 aaPredicted RBP12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 PDIA6Q15084 440 aa12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 KIF6Q6ZMV9 814 aa12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 BCORQ6W2J9 1755 aa12.69□□□□□ -0.38
PRKCSH-215ENST00000592435 KIF3CO14782 793 aa12.68□□□□□ -0.38
PRKCSH-215ENST00000592435 EIF2S2P20042 333 aaKnown RBP12.68□□□□□ -0.38
PRKCSH-215ENST00000592435 LMNB1P20700 586 aa12.68□□□□□ -0.38
PRKCSH-215ENST00000592435 TTLL7Q6ZT98 887 aa12.68□□□□□ -0.38
PRKCSH-215ENST00000592435 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
PRKCSH-215ENST00000592435 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
PRKCSH-215ENST00000592435 LAMB4A4D0S4 1761 aa12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 NPR1P16066 1061 aa12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 GTF2E1P29083 439 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-215ENST00000592435 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 NFKBIEO00221 500 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 APAF1O14727 1248 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 C21orf2O43822 256 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 RASSF7Q02833 373 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
PRKCSH-215ENST00000592435 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 FAM177BA6PVY3 158 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 HOXB7P09629 217 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 PRELPP51888 382 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRKCSH-215ENST00000592435 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 TOMM70O94826 608 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 GPTP24298 496 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 CRY2Q49AN0 593 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 PARP10Q53GL7 1025 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 NMRK2Q9NPI5 230 aa12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
PRKCSH-215ENST00000592435 UBN2Q6ZU65 1347 aa12.63□□□□□ -0.39
PRKCSH-215ENST00000592435 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
PRKCSH-215ENST00000592435 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
PRKCSH-215ENST00000592435 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
PRKCSH-215ENST00000592435 IBTKQ9P2D0 1353 aaPredicted RBP12.63□□□□□ -0.39
PRKCSH-215ENST00000592435 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 ANXA1P04083 346 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 IFT57Q9NWB7 429 aa12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 DBF4Q9UBU7 674 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-215ENST00000592435 NTSR2O95665 410 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 HSPA6P17066 643 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 HOXA10P31260 410 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 GNAI1P63096 354 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 SLC10A5Q5PT55 438 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 SBF1O95248 1867 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
PRKCSH-215ENST00000592435 COL11A2P13942 1736 aaPredicted RBP12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 ANP32CO43423 234 aa12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms