RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
H3F3B-211ENST00000591893 NCKAP5LQ9HCH0 1330 aa21.1■□□□□ 0.97
H3F3B-211ENST00000591893 VPS53Q5VIR6 699 aa21.09■□□□□ 0.97
H3F3B-211ENST00000591893 CWC27Q6UX04 472 aaKnown RBP21.09■□□□□ 0.97
H3F3B-211ENST00000591893 CKAP2LQ8IYA6 745 aa21.09■□□□□ 0.97
H3F3B-211ENST00000591893 KIF18AQ8NI77 898 aa21.09■□□□□ 0.97
H3F3B-211ENST00000591893 TNMDQ9H2S6 317 aa21.09■□□□□ 0.97
H3F3B-211ENST00000591893 PDRG1Q9NUG6 133 aa21.09■□□□□ 0.97
H3F3B-211ENST00000591893 TPD52L1Q16890 204 aaPredicted RBP21.09■□□□□ 0.97
H3F3B-211ENST00000591893 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
H3F3B-211ENST00000591893 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.97
H3F3B-211ENST00000591893 ELP1O95163 1332 aa21.08■□□□□ 0.97
H3F3B-211ENST00000591893 RAB11FIP3O75154 756 aa21.08■□□□□ 0.97
H3F3B-211ENST00000591893 SSH3Q8TE77 659 aa21.08■□□□□ 0.97
H3F3B-211ENST00000591893 C3P01024 1663 aa21.08■□□□□ 0.96
H3F3B-211ENST00000591893 GTF2E1P29083 439 aaPredicted RBP21.08■□□□□ 0.96
H3F3B-211ENST00000591893 FOXO3O43524 673 aa21.07■□□□□ 0.96
H3F3B-211ENST00000591893 UBTFL1P0CB47 393 aaPredicted RBP21.07■□□□□ 0.96
H3F3B-211ENST00000591893 ST3GAL1Q11201 340 aa21.07■□□□□ 0.96
H3F3B-211ENST00000591893 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
H3F3B-211ENST00000591893 DACT1Q9NYF0 836 aa21.07■□□□□ 0.96
H3F3B-211ENST00000591893 SURF6O75683 361 aaKnown RBP21.07■□□□□ 0.96
H3F3B-211ENST00000591893 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
H3F3B-211ENST00000591893 TDRD7Q8NHU6 1098 aaKnown RBP21.07■□□□□ 0.96
H3F3B-211ENST00000591893 USP44Q9H0E7 712 aa21.07■□□□□ 0.96
H3F3B-211ENST00000591893 RHPN1Q8TCX5 695 aa21.06■□□□□ 0.96
H3F3B-211ENST00000591893 CACTINQ8WUQ7 758 aaKnown RBP21.06■□□□□ 0.96
H3F3B-211ENST00000591893 CCDC61Q9Y6R9 512 aa21.06■□□□□ 0.96
H3F3B-211ENST00000591893 ADCK5Q3MIX3 580 aa21.06■□□□□ 0.96
H3F3B-211ENST00000591893 CCDC30Q5VVM6 783 aa21.06■□□□□ 0.96
H3F3B-211ENST00000591893 LARP1BQ659C4 914 aaKnown RBP21.06■□□□□ 0.96
H3F3B-211ENST00000591893 CEP135Q66GS9 1140 aa21.06■□□□□ 0.96
H3F3B-211ENST00000591893 CYP46A1Q9Y6A2 500 aa21.06■□□□□ 0.96
H3F3B-211ENST00000591893 ME3Q16798 604 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 FERMT3Q86UX7 667 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 KRT222Q8N1A0 295 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 CLIP2Q9UDT6 1046 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 TERF2Q15554 542 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 ZNF592Q92610 1267 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 ZSWIM6Q9HCJ5 1215 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 TMEM51Q9NW97 253 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 CCDC171Q6TFL3 1326 aa21.05■□□□□ 0.96
H3F3B-211ENST00000591893 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 FAM173BQ6P4H8 233 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 CDC37L1Q7L3B6 337 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 GOLGA6L4A6NEF3 574 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 ZNF397Q8NF99 534 aaPredicted RBP21.04■□□□□ 0.96
H3F3B-211ENST00000591893 NECTIN2Q92692 538 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 DDX19AQ9NUU7 478 aaKnown RBP21.04■□□□□ 0.96
H3F3B-211ENST00000591893 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
H3F3B-211ENST00000591893 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
H3F3B-211ENST00000591893 PRPF40BQ6NWY9 871 aaKnown RBP21.03■□□□□ 0.96
H3F3B-211ENST00000591893 RBM43Q6ZSC3 357 aaKnown RBP21.03■□□□□ 0.96
H3F3B-211ENST00000591893 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
H3F3B-211ENST00000591893 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
H3F3B-211ENST00000591893 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
H3F3B-211ENST00000591893 PDIA4P13667 645 aaKnown RBP21.03■□□□□ 0.96
H3F3B-211ENST00000591893 CCDC144BQ3MJ40 725 aa21.03■□□□□ 0.96
H3F3B-211ENST00000591893 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
H3F3B-211ENST00000591893 KIF1BPQ96EK5 621 aa21.03■□□□□ 0.96
H3F3B-211ENST00000591893 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
H3F3B-211ENST00000591893 ZNF165P49910 485 aa21.02■□□□□ 0.96
H3F3B-211ENST00000591893 PTH1RQ03431 593 aa21.02■□□□□ 0.96
H3F3B-211ENST00000591893 SCAND2PQ9GZW5 306 aaPredicted RBP21.02■□□□□ 0.96
H3F3B-211ENST00000591893 CLSTN2Q9H4D0 955 aa21.02■□□□□ 0.96
H3F3B-211ENST00000591893 ITSN1Q15811 1721 aa21.02■□□□□ 0.96
H3F3B-211ENST00000591893 POLA2Q14181 598 aa21.02■□□□□ 0.95
H3F3B-211ENST00000591893 KMT5BQ4FZB7 885 aa21.02■□□□□ 0.95
H3F3B-211ENST00000591893 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.95
H3F3B-211ENST00000591893 BCL11BQ9C0K0 894 aaPredicted RBP21.02■□□□□ 0.95
H3F3B-211ENST00000591893 NPHP3Q7Z494 1330 aa21.01■□□□□ 0.95
H3F3B-211ENST00000591893 N4BP2Q86UW6 1770 aaPredicted RBP21.01■□□□□ 0.95
H3F3B-211ENST00000591893 DNAJC25Q9H1X3 360 aa21.01■□□□□ 0.95
H3F3B-211ENST00000591893 CCDC66A2RUB6 948 aa21.01■□□□□ 0.95
H3F3B-211ENST00000591893 PDCP20941 246 aa21.01■□□□□ 0.95
H3F3B-211ENST00000591893 CDC25BP30305 580 aa21.01■□□□□ 0.95
H3F3B-211ENST00000591893 SPATA32Q96LK8 384 aa21.01■□□□□ 0.95
H3F3B-211ENST00000591893 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
H3F3B-211ENST00000591893 ZNF215Q9UL58 517 aaPredicted RBP21■□□□□ 0.95
H3F3B-211ENST00000591893 TPCN1Q9ULQ1 816 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 CRYBG1Q9Y4K1 1723 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 LRRC8AQ8IWT6 810 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 DDX54Q8TDD1 881 aaKnown RBP21■□□□□ 0.95
H3F3B-211ENST00000591893 KCNB2Q92953 911 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 SLC26A8Q96RN1 970 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 CACNA1FO60840 1977 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 MAP3K19Q56UN5 1328 aa21■□□□□ 0.95
H3F3B-211ENST00000591893 TFIP11Q9UBB9 837 aaKnown RBP20.99■□□□□ 0.95
H3F3B-211ENST00000591893 PEAK1Q9H792 1746 aa20.99■□□□□ 0.95
H3F3B-211ENST00000591893 MAP3K5Q99683 1374 aa20.99■□□□□ 0.95
H3F3B-211ENST00000591893 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
H3F3B-211ENST00000591893 USP27XA6NNY8 438 aa20.98■□□□□ 0.95
H3F3B-211ENST00000591893 SRGAP3O43295 1099 aa20.98■□□□□ 0.95
H3F3B-211ENST00000591893 LEO1Q8WVC0 666 aaPredicted RBP20.98■□□□□ 0.95
H3F3B-211ENST00000591893 FAM53CQ9NYF3 392 aa20.98■□□□□ 0.95
H3F3B-211ENST00000591893 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms