RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 HLFQ16534 295 aa23.44■■□□□ 1.34
CROCCP3-205ENST00000591316 RIC3Q7Z5B4 369 aa23.44■■□□□ 1.34
CROCCP3-205ENST00000591316 CAMTA2O94983 1202 aa23.43■■□□□ 1.34
CROCCP3-205ENST00000591316 FRAT1Q92837 279 aaPredicted RBP23.43■■□□□ 1.34
CROCCP3-205ENST00000591316 NOB1Q9ULX3 412 aaKnown RBP23.43■■□□□ 1.34
CROCCP3-205ENST00000591316 MAP3K15Q6ZN16 1313 aa23.42■■□□□ 1.34
CROCCP3-205ENST00000591316 USP42Q9H9J4 1324 aaKnown RBP23.42■■□□□ 1.34
CROCCP3-205ENST00000591316 DDX58O95786 925 aaKnown RBP23.42■■□□□ 1.34
CROCCP3-205ENST00000591316 MSL1Q68DK7 614 aa23.42■■□□□ 1.34
CROCCP3-205ENST00000591316 ZBTB7AO95365 584 aa23.41■■□□□ 1.34
CROCCP3-205ENST00000591316 PI4KAP2A4QPH2 592 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 GYS1P13807 737 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 FKBP8Q14318 412 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 BICDL1Q6ZP65 573 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 PI4KAP1Q8N8J0 262 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 PLBD2Q8NHP8 589 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 BCL2L12Q9HB09 334 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 ERVV-1B6SEH8 477 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 ATF5Q9Y2D1 282 aaPredicted RBP23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 MAP3K2Q9Y2U5 619 aa23.4■■□□□ 1.34
CROCCP3-205ENST00000591316 TUBGCP6Q96RT7 1819 aa23.39■■□□□ 1.34
CROCCP3-205ENST00000591316 F6X3S4 739 aa23.39■■□□□ 1.33
CROCCP3-205ENST00000591316 KSR2Q6VAB6 950 aa23.39■■□□□ 1.33
CROCCP3-205ENST00000591316 ZNF652Q9Y2D9 606 aa23.38■■□□□ 1.33
CROCCP3-205ENST00000591316 BRPF1P55201 1214 aaPredicted RBP23.37■■□□□ 1.33
CROCCP3-205ENST00000591316 NLGN1Q8N2Q7 840 aa23.37■■□□□ 1.33
CROCCP3-205ENST00000591316 SLC16A10Q8TF71 515 aa23.37■■□□□ 1.33
CROCCP3-205ENST00000591316 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
CROCCP3-205ENST00000591316 GIGYF2Q6Y7W6 1299 aaKnown RBP23.36■■□□□ 1.33
CROCCP3-205ENST00000591316 GPTP24298 496 aa23.35■■□□□ 1.33
CROCCP3-205ENST00000591316 SLC4A10Q6U841 1118 aa23.35■■□□□ 1.33
CROCCP3-205ENST00000591316 CLEC4GQ6UXB4 293 aa23.35■■□□□ 1.33
CROCCP3-205ENST00000591316 ATP5J2-PTCD1G3V325 749 aa23.35■■□□□ 1.33
CROCCP3-205ENST00000591316 MYD88Q99836 296 aa23.35■■□□□ 1.33
CROCCP3-205ENST00000591316 PTPRCP08575 1304 aa23.35■■□□□ 1.33
CROCCP3-205ENST00000591316 FAM177BA6PVY3 158 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 IPO8O15397 1037 aaKnown RBP23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 PLIN1O60240 522 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 TCIRG1Q13488 830 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 DNAAF4Q8WXU2 420 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 MTFR1LQ9H019 292 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 NIP7Q9Y221 180 aaKnown RBP eCLIP23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 KIF16BQ96L93 1317 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 ADCY9O60503 1353 aa23.34■■□□□ 1.33
CROCCP3-205ENST00000591316 NFIXQ14938 502 aa23.33■■□□□ 1.33
CROCCP3-205ENST00000591316 SETDB2Q96T68 719 aa23.33■■□□□ 1.33
CROCCP3-205ENST00000591316 METTL22Q9BUU2 404 aaPredicted RBP23.33■■□□□ 1.33
CROCCP3-205ENST00000591316 C4AP0C0L4 1744 aa23.32■■□□□ 1.32
CROCCP3-205ENST00000591316 HSP90AB3PQ58FF7 597 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 ZKSCAN2Q63HK3 967 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 CLUAP1Q96AJ1 413 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 TNNQ9UQP3 1299 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 MMP10P09238 476 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 TM4SF1P30408 202 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 NEXNQ0ZGT2 675 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 API5Q9BZZ5 524 aaKnown RBP23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 QSER1Q2KHR3 1735 aa23.31■■□□□ 1.32
CROCCP3-205ENST00000591316 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
CROCCP3-205ENST00000591316 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
CROCCP3-205ENST00000591316 ZNF34Q8IZ26 560 aa23.3■■□□□ 1.32
CROCCP3-205ENST00000591316 TRIM27P14373 513 aa23.29■■□□□ 1.32
CROCCP3-205ENST00000591316 CWF19L2Q2TBE0 894 aaKnown RBP23.29■■□□□ 1.32
CROCCP3-205ENST00000591316 PARP3Q9Y6F1 533 aa23.28■■□□□ 1.32
CROCCP3-205ENST00000591316 RGL2O15211 777 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 UBN2Q6ZU65 1347 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 NPHP1O15259 732 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 SERPINB2P05120 415 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 IGKV5-2P06315 115 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 POLD1P28340 1107 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 DDR1Q08345 913 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 SUSD4Q5VX71 490 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 SPON1Q9HCB6 807 aa23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
CROCCP3-205ENST00000591316 BEND3Q5T5X7 828 aa23.26■■□□□ 1.31
CROCCP3-205ENST00000591316 NLRP10Q86W26 655 aa23.26■■□□□ 1.31
CROCCP3-205ENST00000591316 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.26■■□□□ 1.31
CROCCP3-205ENST00000591316 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 RTL5Q5HYW3 569 aaPredicted RBP23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 NBPF5PQ86XG9 351 aaPredicted RBP23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 FTSJ3Q8IY81 847 aaKnown RBP23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 CCDC24Q8N4L8 307 aa23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
CROCCP3-205ENST00000591316 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 NUP98P52948 1817 aa23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 NEURL1BA8MQ27 555 aa23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 CENPBP07199 599 aaPredicted RBP23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 GTF2E1P29083 439 aaPredicted RBP23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 PARP10Q53GL7 1025 aa23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 SRCIN1Q9C0H9 1055 aa23.24■■□□□ 1.31
CROCCP3-205ENST00000591316 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 CWC25Q9NXE8 425 aaPredicted RBP23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 TRMT112Q9UI30 125 aaKnown RBP23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 ATP10DQ9P241 1426 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 PTGER2P43116 358 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 TRIM28Q13263 835 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms