RNA–Protein interactions for RNA: ENST00000591085.1

BECN1-217, Transcript of beclin 1, humanhuman

TSL 4

Gene BECN1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-217ENST00000591085 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
BECN1-217ENST00000591085 CACNA1SQ13698 1873 aa12.43□□□□□ -0.42
BECN1-217ENST00000591085 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
BECN1-217ENST00000591085 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
BECN1-217ENST00000591085 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
BECN1-217ENST00000591085 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
BECN1-217ENST00000591085 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
BECN1-217ENST00000591085 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
BECN1-217ENST00000591085 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
BECN1-217ENST00000591085 BTBD11A6QL63 1104 aa12.42□□□□□ -0.42
BECN1-217ENST00000591085 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
BECN1-217ENST00000591085 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
BECN1-217ENST00000591085 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
BECN1-217ENST00000591085 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
BECN1-217ENST00000591085 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
BECN1-217ENST00000591085 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
BECN1-217ENST00000591085 ST5P78524 1137 aa12.41□□□□□ -0.42
BECN1-217ENST00000591085 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
BECN1-217ENST00000591085 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
BECN1-217ENST00000591085 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
BECN1-217ENST00000591085 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
BECN1-217ENST00000591085 NBPF26B4DH59 902 aa12.4□□□□□ -0.42
BECN1-217ENST00000591085 RGL2O15211 777 aa12.4□□□□□ -0.42
BECN1-217ENST00000591085 NBPF10Q6P3W6 841 aaKnown RBP12.4□□□□□ -0.42
BECN1-217ENST00000591085 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
BECN1-217ENST00000591085 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
BECN1-217ENST00000591085 SCN4AP35499 1836 aa12.39□□□□□ -0.43
BECN1-217ENST00000591085 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
BECN1-217ENST00000591085 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
BECN1-217ENST00000591085 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
BECN1-217ENST00000591085 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
BECN1-217ENST00000591085 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 NPHP1O15259 732 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 CAPN15O75808 1086 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 NPR1P16066 1061 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 MCM10Q7L590 875 aa12.38□□□□□ -0.43
BECN1-217ENST00000591085 TAF1DQ9H5J8 278 aaPredicted RBP12.38□□□□□ -0.43
BECN1-217ENST00000591085 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
BECN1-217ENST00000591085 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
BECN1-217ENST00000591085 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
BECN1-217ENST00000591085 FKBP4Q02790 459 aaKnown RBP eCLIP12.37□□□□□ -0.43
BECN1-217ENST00000591085 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
BECN1-217ENST00000591085 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
BECN1-217ENST00000591085 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
BECN1-217ENST00000591085 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
BECN1-217ENST00000591085 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
BECN1-217ENST00000591085 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
BECN1-217ENST00000591085 TPTE2Q6XPS3 522 aa12.36□□□□□ -0.43
BECN1-217ENST00000591085 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
BECN1-217ENST00000591085 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
BECN1-217ENST00000591085 NIP7Q9Y221 180 aaKnown RBP eCLIP12.36□□□□□ -0.43
BECN1-217ENST00000591085 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
BECN1-217ENST00000591085 U2AF1L5P0DN76 240 aaPredicted RBP12.35□□□□□ -0.43
BECN1-217ENST00000591085 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
BECN1-217ENST00000591085 U2AF1Q01081 240 aaKnown RBP eCLIP12.35□□□□□ -0.43
BECN1-217ENST00000591085 HLFQ16534 295 aa12.35□□□□□ -0.43
BECN1-217ENST00000591085 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
BECN1-217ENST00000591085 FZD9O00144 591 aa12.34□□□□□ -0.43
BECN1-217ENST00000591085 FOXN1O15353 648 aa12.34□□□□□ -0.43
BECN1-217ENST00000591085 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
BECN1-217ENST00000591085 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
BECN1-217ENST00000591085 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
BECN1-217ENST00000591085 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
BECN1-217ENST00000591085 COL4A5P29400 1685 aa12.34□□□□□ -0.43
BECN1-217ENST00000591085 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
BECN1-217ENST00000591085 TMEM88BA6NKF7 163 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 EPHX2P34913 555 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
BECN1-217ENST00000591085 VEGFBP49765 207 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
BECN1-217ENST00000591085 PSMD1Q99460 953 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 KDM3BQ7LBC6 1761 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
BECN1-217ENST00000591085 RIC1Q4ADV7 1423 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 GPC2Q8N158 579 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 NUP98P52948 1817 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
BECN1-217ENST00000591085 RASSF10A6NK89 507 aa12.3□□□□□ -0.44
BECN1-217ENST00000591085 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
BECN1-217ENST00000591085 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
BECN1-217ENST00000591085 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
BECN1-217ENST00000591085 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
BECN1-217ENST00000591085 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
BECN1-217ENST00000591085 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
BECN1-217ENST00000591085 UBN2Q6ZU65 1347 aa12.3□□□□□ -0.44
BECN1-217ENST00000591085 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
BECN1-217ENST00000591085 EIF4A1P60842 406 aaKnown RBP12.29□□□□□ -0.44
BECN1-217ENST00000591085 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
BECN1-217ENST00000591085 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
BECN1-217ENST00000591085 SLC51AQ86UW1 340 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms