RNA–Protein interactions for RNA: ENST00000591050.1

GCDH-215, Transcript of glutaryl-CoA dehydrogenase, human

TSL 3

Gene GCDH, Length 423 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCDH-215	ENST00000591050	APLP1	P51693	650 aa		11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	EXOSC9	Q06265	439 aa	Known RBP	11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	NEUROD2	Q15784	382 aa		11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	NFE2L2	Q16236	605 aa		11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	DNAJC5G	Q8N7S2	189 aa		11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	FRAT1	Q92837	279 aa	Predicted RBP	11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	TBC1D32	Q96NH3	1257 aa		11.67	□□□□□ -0.54
GCDH-215	ENST00000591050	HSP90AB1	P08238	724 aa	Known RBP	11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	TRIM27	P14373	513 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	IL13	P35225	146 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	RIPK4	P57078	832 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	BECN1	Q14457	450 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	NFKBIB	Q15653	356 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	SSH1	Q8WYL5	1049 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	ZBTB40	Q9NUA8	1239 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	DAXX	Q9UER7	740 aa	Predicted RBP	11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	PARP3	Q9Y6F1	533 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	UBR2	Q8IWV8	1755 aa		11.66	□□□□□ -0.54
GCDH-215	ENST00000591050	KCP	Q6ZWJ8	1503 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	PTCD1	O75127	700 aa	Known RBP	11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	CABP4	P57796	275 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	LMOD3	Q0VAK6	560 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	AEBP1	Q8IUX7	1158 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	SMC4	Q9NTJ3	1288 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	IFT57	Q9NWB7	429 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	SRP68	Q9UHB9	627 aa	Known RBP	11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	CACNA1S	Q13698	1873 aa		11.65	□□□□□ -0.54
GCDH-215	ENST00000591050	DICER1	Q9UPY3	1922 aa	Known RBP	11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	U2SURP	O15042	1029 aa	Known RBP	11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	CRKL	P46109	303 aa	Known RBP	11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	GNAI1	P63096	354 aa		11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	DDR1	Q08345	913 aa		11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	C9orf131	Q5VYM1	1079 aa		11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	FTSJ3	Q8IY81	847 aa	Known RBP	11.64	□□□□□ -0.55
GCDH-215	ENST00000591050	ANKRD31	Q8N7Z5	1873 aa		11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	USP42	Q9H9J4	1324 aa	Known RBP	11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	AMOT	Q4VCS5	1084 aa		11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	NFATC2IP	Q8NCF5	419 aa		11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	UPF2	Q9HAU5	1272 aa	Known RBP	11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	PIM2	Q9P1W9	311 aa		11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	TNN	Q9UQP3	1299 aa		11.63	□□□□□ -0.55
GCDH-215	ENST00000591050	DLG5	Q8TDM6	1919 aa		11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	HTRA3	P83110	453 aa		11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	RBM46	Q8TBY0	533 aa	Known RBP	11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	TSR2	Q969E8	191 aa	Known RBP	11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	LAS1L	Q9Y4W2	734 aa	Known RBP	11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	MRC1	P22897	1456 aa		11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	SIPA1L3	O60292	1781 aa	Predicted RBP	11.62	□□□□□ -0.55
GCDH-215	ENST00000591050	ABCC4	O15439	1325 aa		11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	COL11A2	P13942	1736 aa	Predicted RBP	11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	EIF5B	O60841	1220 aa	Known RBP	11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	VAMP4	O75379	141 aa		11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	CHRNA5	P30532	468 aa		11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	DALRD3	Q5D0E6	543 aa	Known RBP	11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	C1orf141	Q5JVX7	400 aa		11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	INTS5	Q6P9B9	1019 aa	Known RBP	11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	MRPL50	Q8N5N7	158 aa	Known RBP	11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	ANTXR1	Q9H6X2	564 aa		11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	NOB1	Q9ULX3	412 aa	Known RBP	11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	FER1L6	Q2WGJ9	1857 aa		11.61	□□□□□ -0.55
GCDH-215	ENST00000591050	SCN7A	Q01118	1682 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	POLRMT	O00411	1230 aa	Known RBP	11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	SEC24B	O95487	1268 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	PRKAR2B	P31323	418 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	NUCB1	Q02818	461 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	GSE1	Q14687	1217 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	SULT6B1	Q6IMI4	303 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	GCC1	Q96CN9	775 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	RNF181	Q9P0P0	153 aa		11.6	□□□□□ -0.55
GCDH-215	ENST00000591050	ZBTB7B	O15156	539 aa	Predicted RBP	11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	TM4SF1	P30408	202 aa		11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	TMEM57	Q8N5G2	664 aa		11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	CFAP44	Q96MT7	982 aa		11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	BCL2L13	Q9BXK5	485 aa		11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	SOS1	Q07889	1333 aa	Predicted RBP	11.59	□□□□□ -0.55
GCDH-215	ENST00000591050	RBM25	P49756	843 aa	Known RBP	11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	FSTL1	Q12841	308 aa		11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	USPL1	Q5W0Q7	1092 aa		11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	DNAJC10	Q8IXB1	793 aa		11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	KLRG1	Q96E93	195 aa		11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	RRAGC	Q9HB90	399 aa		11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	ARFGEF2	Q9Y6D5	1785 aa		11.58	□□□□□ -0.56
GCDH-215	ENST00000591050	RASSF7	Q02833	373 aa		11.57	□□□□□ -0.56
GCDH-215	ENST00000591050	JMY	Q8N9B5	988 aa		11.57	□□□□□ -0.56
GCDH-215	ENST00000591050	API5	Q9BZZ5	524 aa	Known RBP	11.57	□□□□□ -0.56
GCDH-215	ENST00000591050	LGR6	Q9HBX8	967 aa		11.57	□□□□□ -0.56
GCDH-215	ENST00000591050	COL15A1	P39059	1388 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	ZPR1	O75312	459 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	CYP19A1	P11511	503 aa	Predicted RBP	11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	PRELP	P51888	382 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	BMP2KL	Q5H9B9	411 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	AKAP4	Q5JQC9	854 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	ITPRIP	Q8IWB1	547 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	SNX21	Q969T3	373 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	SLC52A2	Q9HAB3	445 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	BCOR	Q6W2J9	1755 aa		11.56	□□□□□ -0.56
GCDH-215	ENST00000591050	CARMIL3	Q8ND23	1372 aa		11.55	□□□□□ -0.56

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