RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RGL2O15211 777 aa29.13■■■□□ 2.25
MBD3-208ENST00000590830 PRR5LQ6MZQ0 368 aa29.13■■■□□ 2.25
MBD3-208ENST00000590830 BCORQ6W2J9 1755 aa29.13■■■□□ 2.25
MBD3-208ENST00000590830 CCDC27Q2M243 656 aa29.12■■■□□ 2.25
MBD3-208ENST00000590830 ZNF652Q9Y2D9 606 aa29.12■■■□□ 2.25
MBD3-208ENST00000590830 GNAI1P63096 354 aa29.11■■■□□ 2.25
MBD3-208ENST00000590830 CALD1Q05682 793 aaKnown RBP29.11■■■□□ 2.25
MBD3-208ENST00000590830 WWC1Q8IX03 1113 aa29.11■■■□□ 2.25
MBD3-208ENST00000590830 BCS1LQ9Y276 419 aa29.11■■■□□ 2.25
MBD3-208ENST00000590830 MAP3K15Q6ZN16 1313 aa29.11■■■□□ 2.25
MBD3-208ENST00000590830 ERVV-1B6SEH8 477 aa29.1■■■□□ 2.25
MBD3-208ENST00000590830 FAM9BQ8IZU0 186 aa29.1■■■□□ 2.25
MBD3-208ENST00000590830 PIM2Q9P1W9 311 aa29.1■■■□□ 2.25
MBD3-208ENST00000590830 DUSP27Q5VZP5 1158 aa29.09■■■□□ 2.25
MBD3-208ENST00000590830 NIP7Q9Y221 180 aaKnown RBP eCLIP29.09■■■□□ 2.25
MBD3-208ENST00000590830 NCBP3Q53F19 620 aaKnown RBP29.08■■■□□ 2.25
MBD3-208ENST00000590830 ZBTB3Q9H5J0 574 aa29.08■■■□□ 2.25
MBD3-208ENST00000590830 HOXB7P09629 217 aa29.07■■■□□ 2.24
MBD3-208ENST00000590830 KIF6Q6ZMV9 814 aa29.07■■■□□ 2.24
MBD3-208ENST00000590830 BRIP1Q9BX63 1249 aa29.07■■■□□ 2.24
MBD3-208ENST00000590830 C2CD5Q86YS7 1000 aa29.06■■■□□ 2.24
MBD3-208ENST00000590830 CNBD1Q8NA66 436 aa29.06■■■□□ 2.24
MBD3-208ENST00000590830 DDX21Q9NR30 783 aaKnown RBP eCLIP29.06■■■□□ 2.24
MBD3-208ENST00000590830 DALRD3Q5D0E6 543 aaKnown RBP29.05■■■□□ 2.24
MBD3-208ENST00000590830 HDGFL1Q5TGJ6 251 aa29.05■■■□□ 2.24
MBD3-208ENST00000590830 C8orf58Q8NAV2 365 aa29.05■■■□□ 2.24
MBD3-208ENST00000590830 CHPF2Q9P2E5 772 aa29.05■■■□□ 2.24
MBD3-208ENST00000590830 SALL2Q9Y467 1007 aaPredicted RBP29.05■■■□□ 2.24
MBD3-208ENST00000590830 ELL2O00472 640 aaPredicted RBP29.04■■■□□ 2.24
MBD3-208ENST00000590830 COPS6Q7L5N1 327 aa29.04■■■□□ 2.24
MBD3-208ENST00000590830 NBPF5PQ86XG9 351 aaPredicted RBP29.04■■■□□ 2.24
MBD3-208ENST00000590830 CHD4Q14839 1912 aa29.03■■■□□ 2.24
MBD3-208ENST00000590830 FAM177BA6PVY3 158 aa29.03■■■□□ 2.24
MBD3-208ENST00000590830 XAGE3Q8WTP9 111 aa29.03■■■□□ 2.24
MBD3-208ENST00000590830 BRCA1P38398 1863 aaKnown RBP29.02■■■□□ 2.24
MBD3-208ENST00000590830 H0YIN7 160 aa29.02■■■□□ 2.24
MBD3-208ENST00000590830 GIGYF2Q6Y7W6 1299 aaKnown RBP29.02■■■□□ 2.24
MBD3-208ENST00000590830 TSR2Q969E8 191 aaKnown RBP29.02■■■□□ 2.24
MBD3-208ENST00000590830 PDE6BP35913 854 aa29.01■■■□□ 2.23
MBD3-208ENST00000590830 AIMP1Q12904 312 aaKnown RBP29.01■■■□□ 2.23
MBD3-208ENST00000590830 ZNF34Q8IZ26 560 aa29.01■■■□□ 2.23
MBD3-208ENST00000590830 GPTP24298 496 aa29■■■□□ 2.23
MBD3-208ENST00000590830 ST5P78524 1137 aa29■■■□□ 2.23
MBD3-208ENST00000590830 TPTE2Q6XPS3 522 aa29■■■□□ 2.23
MBD3-208ENST00000590830 TSPYL6Q8N831 410 aa29■■■□□ 2.23
MBD3-208ENST00000590830 ZNF784Q8NCA9 323 aaPredicted RBP29■■■□□ 2.23
MBD3-208ENST00000590830 ATP10DQ9P241 1426 aa29■■■□□ 2.23
MBD3-208ENST00000590830 ANKRD31Q8N7Z5 1873 aa29■■■□□ 2.23
MBD3-208ENST00000590830 UBN2Q6ZU65 1347 aa28.99■■■□□ 2.23
MBD3-208ENST00000590830 NPHP1O15259 732 aa28.99■■■□□ 2.23
MBD3-208ENST00000590830 ARHGAP27Q6ZUM4 889 aa28.99■■■□□ 2.23
MBD3-208ENST00000590830 IL16Q14005 1332 aa28.98■■■□□ 2.23
MBD3-208ENST00000590830 DBF4Q9UBU7 674 aaPredicted RBP28.98■■■□□ 2.23
MBD3-208ENST00000590830 SUSD4Q5VX71 490 aa28.97■■■□□ 2.23
MBD3-208ENST00000590830 WDR63Q8IWG1 891 aa28.96■■■□□ 2.23
MBD3-208ENST00000590830 TTLL6Q8N841 843 aa28.96■■■□□ 2.23
MBD3-208ENST00000590830 PDZRN3Q9UPQ7 1066 aa28.96■■■□□ 2.23
MBD3-208ENST00000590830 NUP98P52948 1817 aa28.96■■■□□ 2.23
MBD3-208ENST00000590830 KLRG2A4D1S0 409 aaPredicted RBP28.95■■■□□ 2.22
MBD3-208ENST00000590830 NUTM1Q86Y26 1132 aa28.95■■■□□ 2.22
MBD3-208ENST00000590830 ZNF622Q969S3 477 aaKnown RBP eCLIP28.95■■■□□ 2.22
MBD3-208ENST00000590830 SRGNP10124 158 aa28.94■■■□□ 2.22
MBD3-208ENST00000590830 HYPKQ9NX55 129 aa28.94■■■□□ 2.22
MBD3-208ENST00000590830 ERFEQ4G0M1 354 aa28.93■■■□□ 2.22
MBD3-208ENST00000590830 SPINK5Q9NQ38 1064 aaPredicted RBP28.93■■■□□ 2.22
MBD3-208ENST00000590830 NYXQ9GZU5 481 aa28.92■■■□□ 2.22
MBD3-208ENST00000590830 ABCC12Q96J65 1359 aa28.91■■■□□ 2.22
MBD3-208ENST00000590830 DLEC1Q9Y238 1755 aa28.91■■■□□ 2.22
MBD3-208ENST00000590830 NTSR2O95665 410 aa28.91■■■□□ 2.22
MBD3-208ENST00000590830 GTF2E1P29083 439 aaPredicted RBP28.91■■■□□ 2.22
MBD3-208ENST00000590830 PHAXQ9H814 394 aaKnown RBP28.91■■■□□ 2.22
MBD3-208ENST00000590830 ARFGEF1Q9Y6D6 1849 aa28.9■■■□□ 2.22
MBD3-208ENST00000590830 COL11A2P13942 1736 aaPredicted RBP28.9■■■□□ 2.22
MBD3-208ENST00000590830 TCIRG1Q13488 830 aa28.9■■■□□ 2.22
MBD3-208ENST00000590830 STYK1Q6J9G0 422 aa28.9■■■□□ 2.22
MBD3-208ENST00000590830 ANKRD13DQ6ZTN6 518 aa28.9■■■□□ 2.22
MBD3-208ENST00000590830 PLBD2Q8NHP8 589 aa28.9■■■□□ 2.22
MBD3-208ENST00000590830 PARP10Q53GL7 1025 aa28.89■■■□□ 2.22
MBD3-208ENST00000590830 MASTLQ96GX5 879 aa28.89■■■□□ 2.22
MBD3-208ENST00000590830 FANCIQ9NVI1 1328 aa28.89■■■□□ 2.21
MBD3-208ENST00000590830 ADCY9O60503 1353 aa28.88■■■□□ 2.21
MBD3-208ENST00000590830 CCER2I3L3R5 266 aa28.88■■■□□ 2.21
MBD3-208ENST00000590830 IBTKQ9P2D0 1353 aaPredicted RBP28.88■■■□□ 2.21
MBD3-208ENST00000590830 HSP90AB3PQ58FF7 597 aa28.87■■■□□ 2.21
MBD3-208ENST00000590830 CCDC30Q5VVM6 783 aa28.87■■■□□ 2.21
MBD3-208ENST00000590830 NLRP10Q86W26 655 aa28.87■■■□□ 2.21
MBD3-208ENST00000590830 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
MBD3-208ENST00000590830 TWISTNBQ3B726 338 aaPredicted RBP28.86■■■□□ 2.21
MBD3-208ENST00000590830 PPP1R42Q7Z4L9 355 aa28.86■■■□□ 2.21
MBD3-208ENST00000590830 CNKSR1Q969H4 720 aa28.86■■■□□ 2.21
MBD3-208ENST00000590830 ZNF219Q9P2Y4 722 aaPredicted RBP28.86■■■□□ 2.21
MBD3-208ENST00000590830 C21orf2O43822 256 aa28.85■■■□□ 2.21
MBD3-208ENST00000590830 NPR1P16066 1061 aa28.85■■■□□ 2.21
MBD3-208ENST00000590830 UTP14AQ9BVJ6 771 aaKnown RBP28.85■■■□□ 2.21
MBD3-208ENST00000590830 ZNF521Q96K83 1311 aa28.85■■■□□ 2.21
MBD3-208ENST00000590830 PRELPP51888 382 aa28.84■■■□□ 2.21
MBD3-208ENST00000590830 CRY2Q49AN0 593 aa28.84■■■□□ 2.21
MBD3-208ENST00000590830 PRPF40BQ6NWY9 871 aaKnown RBP28.84■■■□□ 2.21
MBD3-208ENST00000590830 C3orf67Q6ZVT6 689 aa28.84■■■□□ 2.21
MBD3-208ENST00000590830 SYNE4Q8N205 404 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms