RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 LMNB1P20700 586 aa10□□□□□ -0.81
NPC1-208ENST00000590301 EIF4A1P60842 406 aaKnown RBP10□□□□□ -0.81
NPC1-208ENST00000590301 DDX10Q13206 875 aaKnown RBP10□□□□□ -0.81
NPC1-208ENST00000590301 SOGA3Q5TF21 947 aa10□□□□□ -0.81
NPC1-208ENST00000590301 STYK1Q6J9G0 422 aa10□□□□□ -0.81
NPC1-208ENST00000590301 NBPF10Q6P3W6 841 aaKnown RBP10□□□□□ -0.81
NPC1-208ENST00000590301 NBPF5PQ86XG9 351 aaPredicted RBP10□□□□□ -0.81
NPC1-208ENST00000590301 NBPF15Q8N660 670 aa10□□□□□ -0.81
NPC1-208ENST00000590301 CNKSR1Q969H4 720 aa10□□□□□ -0.81
NPC1-208ENST00000590301 SIPA1L3O60292 1781 aaPredicted RBP9.99□□□□□ -0.81
NPC1-208ENST00000590301 ERVV-1B6SEH8 477 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 TOMM70O94826 608 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 HSPA6P17066 643 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 DSG3P32926 999 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 TPTE2Q6XPS3 522 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
NPC1-208ENST00000590301 KLRG2A4D1S0 409 aaPredicted RBP9.98□□□□□ -0.81
NPC1-208ENST00000590301 SRGNP10124 158 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 RIPK4P57078 832 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 WDR43Q15061 677 aaKnown RBP eCLIP9.98□□□□□ -0.81
NPC1-208ENST00000590301 KIF6Q6ZMV9 814 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 ZNF622Q969S3 477 aaKnown RBP eCLIP9.98□□□□□ -0.81
NPC1-208ENST00000590301 MASTLQ96GX5 879 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 TSPYL4Q9UJ04 414 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
NPC1-208ENST00000590301 SCN7AQ01118 1682 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 LTBP3Q9NS15 1303 aa9.98□□□□□ -0.81
NPC1-208ENST00000590301 NPR1P16066 1061 aa9.97□□□□□ -0.81
NPC1-208ENST00000590301 TMPOP42166 694 aaKnown RBP9.97□□□□□ -0.81
NPC1-208ENST00000590301 PIP4K2AP48426 406 aaPredicted RBP9.97□□□□□ -0.81
NPC1-208ENST00000590301 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
NPC1-208ENST00000590301 C16orf71Q8IYS4 520 aaPredicted RBP9.97□□□□□ -0.81
NPC1-208ENST00000590301 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
NPC1-208ENST00000590301 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
NPC1-208ENST00000590301 NYXQ9GZU5 481 aa9.97□□□□□ -0.81
NPC1-208ENST00000590301 NFKBIEO00221 500 aa9.96□□□□□ -0.82
NPC1-208ENST00000590301 RASSF7Q02833 373 aa9.96□□□□□ -0.82
NPC1-208ENST00000590301 FSTL1Q12841 308 aa9.96□□□□□ -0.82
NPC1-208ENST00000590301 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.82
NPC1-208ENST00000590301 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
NPC1-208ENST00000590301 NMRK2Q9NPI5 230 aa9.96□□□□□ -0.82
NPC1-208ENST00000590301 ZNF219Q9P2Y4 722 aaPredicted RBP9.96□□□□□ -0.82
NPC1-208ENST00000590301 MAP3K15Q6ZN16 1313 aa9.96□□□□□ -0.82
NPC1-208ENST00000590301 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.82
NPC1-208ENST00000590301 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.82
NPC1-208ENST00000590301 GLTPD2A6NH11 291 aa9.95□□□□□ -0.82
NPC1-208ENST00000590301 C21orf2O43822 256 aa9.95□□□□□ -0.82
NPC1-208ENST00000590301 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
NPC1-208ENST00000590301 APLP1P51693 650 aa9.95□□□□□ -0.82
NPC1-208ENST00000590301 TAOK3Q9H2K8 898 aa9.95□□□□□ -0.82
NPC1-208ENST00000590301 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
NPC1-208ENST00000590301 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 MYL6BP14649 208 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 ALDH1B1P30837 517 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 HLFQ16534 295 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 CCDC93Q567U6 631 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 PRKRIP1Q9H875 184 aaPredicted RBP9.94□□□□□ -0.82
NPC1-208ENST00000590301 CEP350Q5VT06 3117 aa9.94□□□□□ -0.82
NPC1-208ENST00000590301 RNF123Q5XPI4 1314 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 CHL1O00533 1208 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 ABCB7O75027 752 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 HOXB7P09629 217 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 VEGFAP15692 232 aaPredicted RBP9.93□□□□□ -0.82
NPC1-208ENST00000590301 ZEB1P37275 1124 aaPredicted RBP9.93□□□□□ -0.82
NPC1-208ENST00000590301 CRY2Q49AN0 593 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 GIGYF2Q6Y7W6 1299 aaKnown RBP9.93□□□□□ -0.82
NPC1-208ENST00000590301 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 BRCA1P38398 1863 aaKnown RBP9.93□□□□□ -0.82
NPC1-208ENST00000590301 ARFGEF1Q9Y6D6 1849 aa9.93□□□□□ -0.82
NPC1-208ENST00000590301 PRELPP51888 382 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 CALD1Q05682 793 aaKnown RBP9.92□□□□□ -0.82
NPC1-208ENST00000590301 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 HSP90AB3PQ58FF7 597 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 CC2D2BQ6DHV5 1058 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 TTLL7Q6ZT98 887 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 PPP1R42Q7Z4L9 355 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 ZNF34Q8IZ26 560 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 RTKN2Q8IZC4 609 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 SMC1BQ8NDV3 1235 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 RRAGCQ9HB90 399 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 ADAMTS8Q9UP79 889 aa9.92□□□□□ -0.82
NPC1-208ENST00000590301 HOXA10P31260 410 aaPredicted RBP9.91□□□□□ -0.82
NPC1-208ENST00000590301 FKBP4Q02790 459 aaKnown RBP eCLIP9.91□□□□□ -0.82
NPC1-208ENST00000590301 PDIA6Q15084 440 aa9.91□□□□□ -0.82
NPC1-208ENST00000590301 LRP10Q7Z4F1 713 aa9.91□□□□□ -0.82
NPC1-208ENST00000590301 CCDC146Q8IYE0 955 aa9.91□□□□□ -0.82
NPC1-208ENST00000590301 TRIM35Q9UPQ4 493 aa9.91□□□□□ -0.82
NPC1-208ENST00000590301 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
NPC1-208ENST00000590301 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
NPC1-208ENST00000590301 FAM177BA6PVY3 158 aa9.9□□□□□ -0.82
NPC1-208ENST00000590301 EIF2S2P20042 333 aaKnown RBP9.9□□□□□ -0.82
NPC1-208ENST00000590301 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms