RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	GGCX	P38435	758 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	LBX1	P52954	281 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	COL23A1	Q86Y22	540 aa	Predicted RBP	10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	PHOX2B	Q99453	314 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	POGK	Q9P215	609 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	USP6	P35125	1406 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	VPS8	Q8N3P4	1428 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	PRR36	Q9H6K5	1346 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	KNDC1	Q76NI1	1749 aa		10.3	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	EIF3A	Q14152	1382 aa	Known RBP	10.29	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	KIF1B	O60333	1816 aa		10.29	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	RDH13	Q8NBN7	331 aa		10.29	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	C10orf71	Q711Q0	1435 aa		10.29	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	DDX11L8	A8MPP1	907 aa		10.28	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	GC	P02774	474 aa		10.28	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	ARHGAP27	Q6ZUM4	889 aa		10.28	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	MKRN1	Q9UHC7	482 aa	Known RBP	10.28	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	PLEKHG2	Q9H7P9	1386 aa		10.27	□□□□□ -0.76
ATP6V0A1-222	ENST00000589727	CIC	Q96RK0	1608 aa	Predicted RBP	10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	KCNQ4	P56696	695 aa		10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	MAP2K5	Q13163	448 aa		10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	C9orf131	Q5VYM1	1079 aa		10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	ABTB2	Q8N961	1025 aa		10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	PRKD2	Q9BZL6	878 aa		10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	QSER1	Q2KHR3	1735 aa		10.27	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	WDR17	Q8IZU2	1322 aa		10.26	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	AKAP12	Q02952	1782 aa		10.26	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	NHS	Q6T4R5	1651 aa		10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	TNRC18	O15417	2968 aa	Predicted RBP	10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	KCP	Q6ZWJ8	1503 aa		10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	TLL1	O43897	1013 aa		10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	NR1I2	O75469	434 aa		10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	SULF1	Q8IWU6	871 aa		10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	TMUB1	Q9BVT8	246 aa		10.25	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	PXDNL	A1KZ92	1463 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	IRF6	O14896	467 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	PUS10	Q3MIT2	529 aa	Known RBP	10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	NLRP13	Q86W25	1043 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	CARD10	Q9BWT7	1032 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	BCS1L	Q9Y276	419 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	ROCK1	Q13464	1354 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	PPL	O60437	1756 aa		10.24	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	WASL	O00401	505 aa	Predicted RBP	10.23	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	CSB-PGBD3	P0DP91	1061 aa		10.23	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	HSPA8	P11142	646 aa	Known RBP	10.22	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	PRPF38B	Q5VTL8	546 aa	Known RBP	10.22	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	SCUBE3	Q8IX30	993 aa		10.22	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727		V9GY48	417 aa	Predicted RBP	10.22	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.22	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	CUL9	Q8IWT3	2517 aa		10.21	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	RGL3	Q3MIN7	710 aa		10.21	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	FLAD1	Q8NFF5	587 aa		10.21	□□□□□ -0.77
ATP6V0A1-222	ENST00000589727	PIK3C2G	O75747	1445 aa		10.21	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	RNF223	E7ERA6	249 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	BTAF1	O14981	1849 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	ADH1B	P00325	375 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	GCGR	P47871	477 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	FUT2	Q10981	343 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	TRPM1	Q7Z4N2	1603 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	RNF181	Q9P0P0	153 aa		10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	CCNL1	Q9UK58	526 aa	Predicted RBP	10.2	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	CNTNAP1	P78357	1384 aa		10.19	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	S1PR4	O95977	384 aa		10.19	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	VEGFA	P15692	232 aa	Predicted RBP	10.19	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	NUDT16	Q96DE0	195 aa	Known RBP	10.19	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	C14orf93	Q9H972	538 aa	Known RBP	10.19	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	TUBGCP6	Q96RT7	1819 aa		10.19	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	CCDC7	Q96M83	1385 aa		10.18	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	ACE	P12821	1306 aa		10.18	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	ATP6V1A	P38606	617 aa		10.18	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	CCDC102A	Q96A19	550 aa		10.18	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	PPIP5K1	Q6PFW1	1433 aa		10.17	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	VEGFB	P49765	207 aa		10.17	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	MORN1	Q5T089	497 aa		10.17	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	CFAP70	Q5T0N1	1121 aa		10.17	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	SYTL4	Q96C24	671 aa	Predicted RBP	10.17	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727		A0A0G2JLW4	131 aa		10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	PPEF1	O14829	653 aa	Predicted RBP	10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	GFRA3	O60609	400 aa		10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	MDM2	Q00987	491 aa	Predicted RBP	10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	SPSB2	Q99619	263 aa		10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	SLC6A16	Q9GZN6	736 aa		10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	ABCC6	O95255	1503 aa		10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	WNK3	Q9BYP7	1800 aa		10.16	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	POLR3A	O14802	1390 aa	Predicted RBP	10.15	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	TGFB2	P61812	414 aa		10.15	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	LAPTM4A	Q15012	233 aa		10.15	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727		Q6ZNB5	142 aa		10.15	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	ANKLE1	Q8NAG6	615 aa		10.15	□□□□□ -0.78
ATP6V0A1-222	ENST00000589727	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.15	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	CD46	P15529	392 aa		10.14	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	MAP2K1	Q02750	393 aa	Predicted RBP	10.14	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	TRAK1	Q9UPV9	953 aa		10.14	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	KAT6B	Q8WYB5	2073 aa		10.14	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	IL2RB	P14784	551 aa		10.13	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	HMGB2	P26583	209 aa	Known RBP	10.13	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	SLC19A1	P41440	591 aa		10.13	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	GRIPAP1	Q4V328	841 aa		10.13	□□□□□ -0.79
ATP6V0A1-222	ENST00000589727	KRI1	Q8N9T8	703 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms