RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 MAPK8IP3Q9UPT6 1336 aa14.73□□□□□ -0.05
DDX39A-210ENST00000589675 EIF4A1P60842 406 aaKnown RBP14.73□□□□□ -0.05
DDX39A-210ENST00000589675 ST5P78524 1137 aa14.73□□□□□ -0.05
DDX39A-210ENST00000589675 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
DDX39A-210ENST00000589675 NUP98P52948 1817 aa14.72□□□□□ -0.05
DDX39A-210ENST00000589675 KLRG2A4D1S0 409 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-210ENST00000589675 SRGNP10124 158 aa14.72□□□□□ -0.05
DDX39A-210ENST00000589675 RASSF7Q02833 373 aa14.72□□□□□ -0.05
DDX39A-210ENST00000589675 CNKSR1Q969H4 720 aa14.72□□□□□ -0.05
DDX39A-210ENST00000589675 ZNF622Q969S3 477 aaKnown RBP eCLIP14.72□□□□□ -0.056e-12■□□□□ 10.2
DDX39A-210ENST00000589675 BABAM1Q9NWV8 329 aa14.72□□□□□ -0.05
DDX39A-210ENST00000589675 SLX4Q8IY92 1834 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 ERVV-1B6SEH8 477 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 NFKBIEO00221 500 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 NPHP1O15259 732 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 PRELPP51888 382 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 TPTE2Q6XPS3 522 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
DDX39A-210ENST00000589675 RBM46Q8TBY0 533 aaKnown RBP14.71□□□□□ -0.05
DDX39A-210ENST00000589675 MASTLQ96GX5 879 aa14.71□□□□□ -0.05
DDX39A-210ENST00000589675 MYBBP1AQ9BQG0 1328 aaKnown RBP14.7□□□□□ -0.06
DDX39A-210ENST00000589675 LTBP3Q9NS15 1303 aa14.7□□□□□ -0.06
DDX39A-210ENST00000589675 CACNA1SQ13698 1873 aa14.7□□□□□ -0.06
DDX39A-210ENST00000589675 DDX10Q13206 875 aaKnown RBP14.7□□□□□ -0.06
DDX39A-210ENST00000589675 CCDC24Q8N4L8 307 aa14.7□□□□□ -0.06
DDX39A-210ENST00000589675 NIP7Q9Y221 180 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDX39A-210ENST00000589675 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
DDX39A-210ENST00000589675 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
DDX39A-210ENST00000589675 GLTPD2A6NH11 291 aa14.69□□□□□ -0.06
DDX39A-210ENST00000589675 C21orf2O43822 256 aa14.69□□□□□ -0.06
DDX39A-210ENST00000589675 APLP1P51693 650 aa14.69□□□□□ -0.06
DDX39A-210ENST00000589675 SOGA3Q5TF21 947 aa14.69□□□□□ -0.06
DDX39A-210ENST00000589675 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
DDX39A-210ENST00000589675 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
DDX39A-210ENST00000589675 TMPOP42166 694 aaKnown RBP14.68□□□□□ -0.06
DDX39A-210ENST00000589675 RIPK4P57078 832 aa14.68□□□□□ -0.06
DDX39A-210ENST00000589675 LMOD3Q0VAK6 560 aa14.68□□□□□ -0.06
DDX39A-210ENST00000589675 FSTL1Q12841 308 aa14.68□□□□□ -0.06
DDX39A-210ENST00000589675 HLFQ16534 295 aa14.68□□□□□ -0.06
DDX39A-210ENST00000589675 RRAGCQ9HB90 399 aa14.68□□□□□ -0.06
DDX39A-210ENST00000589675 MAP3K15Q6ZN16 1313 aa14.67□□□□□ -0.06
DDX39A-210ENST00000589675 NPR1P16066 1061 aa14.67□□□□□ -0.06
DDX39A-210ENST00000589675 PRPF40BQ6NWY9 871 aaKnown RBP14.67□□□□□ -0.06
DDX39A-210ENST00000589675 C7orf43Q8WVR3 580 aa14.67□□□□□ -0.06
DDX39A-210ENST00000589675 NYXQ9GZU5 481 aa14.66□□□□□ -0.06
DDX39A-210ENST00000589675 TSPYL4Q9UJ04 414 aa14.66□□□□□ -0.06
DDX39A-210ENST00000589675 RRP7AQ9Y3A4 280 aaKnown RBP14.66□□□□□ -0.06
DDX39A-210ENST00000589675 IBTKQ9P2D0 1353 aaPredicted RBP14.65□□□□□ -0.06
DDX39A-210ENST00000589675 VEGFAP15692 232 aaPredicted RBP14.65□□□□□ -0.06
DDX39A-210ENST00000589675 DPY19L2Q6NUT2 758 aa14.65□□□□□ -0.06
DDX39A-210ENST00000589675 KIF6Q6ZMV9 814 aa14.65□□□□□ -0.06
DDX39A-210ENST00000589675 TAOK3Q9H2K8 898 aa14.65□□□□□ -0.06
DDX39A-210ENST00000589675 WDR90Q96KV7 1748 aa14.65□□□□□ -0.06
DDX39A-210ENST00000589675 TTLL7Q6ZT98 887 aa14.64□□□□□ -0.07
DDX39A-210ENST00000589675 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
DDX39A-210ENST00000589675 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
DDX39A-210ENST00000589675 RIC1Q4ADV7 1423 aa14.64□□□□□ -0.07
DDX39A-210ENST00000589675 MYL6BP14649 208 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 GTF2E1P29083 439 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-210ENST00000589675 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 PDIA6Q15084 440 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 CRY2Q49AN0 593 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 ERFEQ4G0M1 354 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 GIGYF2Q6Y7W6 1299 aaKnown RBP14.63□□□□□ -0.07
DDX39A-210ENST00000589675 LRP10Q7Z4F1 713 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 DNAJC5GQ8N7S2 189 aa14.63□□□□□ -0.07
DDX39A-210ENST00000589675 PCNTO95613 3336 aa14.62□□□□□ -0.07
DDX39A-210ENST00000589675 CHL1O00533 1208 aa14.62□□□□□ -0.07
DDX39A-210ENST00000589675 CCDC93Q567U6 631 aa14.62□□□□□ -0.07
DDX39A-210ENST00000589675 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
DDX39A-210ENST00000589675 SMC1BQ8NDV3 1235 aa14.62□□□□□ -0.07
DDX39A-210ENST00000589675 FAM177BA6PVY3 158 aa14.61□□□□□ -0.07
DDX39A-210ENST00000589675 POTECB2RU33 542 aa14.61□□□□□ -0.07
DDX39A-210ENST00000589675 WDR43Q15061 677 aaKnown RBP eCLIP14.61□□□□□ -0.07
DDX39A-210ENST00000589675 RTKN2Q8IZC4 609 aa14.61□□□□□ -0.07
DDX39A-210ENST00000589675 PRKRIP1Q9H875 184 aaPredicted RBP14.61□□□□□ -0.07
DDX39A-210ENST00000589675 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
DDX39A-210ENST00000589675 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
DDX39A-210ENST00000589675 UBN2Q6ZU65 1347 aa14.61□□□□□ -0.07
DDX39A-210ENST00000589675 HOXA10P31260 410 aaPredicted RBP14.6□□□□□ -0.07
DDX39A-210ENST00000589675 FKBP4Q02790 459 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDX39A-210ENST00000589675 PARP10Q53GL7 1025 aa14.6□□□□□ -0.07
DDX39A-210ENST00000589675 CCDC146Q8IYE0 955 aa14.6□□□□□ -0.07
DDX39A-210ENST00000589675 ZBTB3Q9H5J0 574 aa14.6□□□□□ -0.07
DDX39A-210ENST00000589675 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
DDX39A-210ENST00000589675 SUSD4Q5VX71 490 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 CC2D2BQ6DHV5 1058 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 PPP1R42Q7Z4L9 355 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 ANKRD36CQ5JPF3 1778 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 SCN4AP35499 1836 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 ABCC12Q96J65 1359 aa14.59□□□□□ -0.07
DDX39A-210ENST00000589675 NTSR2O95665 410 aa14.58□□□□□ -0.08
DDX39A-210ENST00000589675 HOXB7P09629 217 aa14.58□□□□□ -0.08
DDX39A-210ENST00000589675 GPTP24298 496 aa14.58□□□□□ -0.08
DDX39A-210ENST00000589675 NEUROD2Q15784 382 aa14.58□□□□□ -0.08
DDX39A-210ENST00000589675 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
DDX39A-210ENST00000589675 RNF123Q5XPI4 1314 aa14.58□□□□□ -0.08
DDX39A-210ENST00000589675 SNED1Q8TER0 1413 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms