RNA–Protein interactions for RNA: ENST00000589605.5

RDH13-214, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-214ENST00000589605 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
RDH13-214ENST00000589605 PIP4K2AP48426 406 aaPredicted RBP16.48■□□□□ 0.23
RDH13-214ENST00000589605 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
RDH13-214ENST00000589605 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
RDH13-214ENST00000589605 PRPF40BQ6NWY9 871 aaKnown RBP16.47■□□□□ 0.23
RDH13-214ENST00000589605 CNKSR1Q969H4 720 aa16.47■□□□□ 0.23
RDH13-214ENST00000589605 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
RDH13-214ENST00000589605 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
RDH13-214ENST00000589605 SRGNP10124 158 aa16.46■□□□□ 0.23
RDH13-214ENST00000589605 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
RDH13-214ENST00000589605 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
RDH13-214ENST00000589605 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
RDH13-214ENST00000589605 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
RDH13-214ENST00000589605 HSPA1AP0DMV8 641 aaKnown RBP16.44■□□□□ 0.22
RDH13-214ENST00000589605 HSPA1BP0DMV9 641 aaKnown RBP16.44■□□□□ 0.22
RDH13-214ENST00000589605 MCM10Q7L590 875 aa16.44■□□□□ 0.22
RDH13-214ENST00000589605 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
RDH13-214ENST00000589605 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
RDH13-214ENST00000589605 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
RDH13-214ENST00000589605 SNRPA1P09661 255 aaKnown RBP16.43■□□□□ 0.22
RDH13-214ENST00000589605 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
RDH13-214ENST00000589605 TNS4Q8IZW8 715 aa16.43■□□□□ 0.22
RDH13-214ENST00000589605 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
RDH13-214ENST00000589605 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
RDH13-214ENST00000589605 POTEIP0CG38 1075 aa16.42■□□□□ 0.22
RDH13-214ENST00000589605 POTEJP0CG39 1038 aa16.42■□□□□ 0.22
RDH13-214ENST00000589605 U2AF1L5P0DN76 240 aaPredicted RBP16.42■□□□□ 0.22
RDH13-214ENST00000589605 U2AF1Q01081 240 aaKnown RBP eCLIP16.42■□□□□ 0.22
RDH13-214ENST00000589605 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
RDH13-214ENST00000589605 DCTN1Q14203 1278 aa16.41■□□□□ 0.22
RDH13-214ENST00000589605 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
RDH13-214ENST00000589605 PCNTO95613 3336 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 CAPN15O75808 1086 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 NPR1P16066 1061 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
RDH13-214ENST00000589605 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
RDH13-214ENST00000589605 SCN4AP35499 1836 aa16.4■□□□□ 0.22
RDH13-214ENST00000589605 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
RDH13-214ENST00000589605 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
RDH13-214ENST00000589605 IQCA1LA6NCM1 817 aa16.38■□□□□ 0.21
RDH13-214ENST00000589605 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
RDH13-214ENST00000589605 RGL2O15211 777 aa16.38■□□□□ 0.21
RDH13-214ENST00000589605 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
RDH13-214ENST00000589605 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
RDH13-214ENST00000589605 L3MBTL3Q96JM7 780 aaPredicted RBP16.38■□□□□ 0.21
RDH13-214ENST00000589605 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
RDH13-214ENST00000589605 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
RDH13-214ENST00000589605 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
RDH13-214ENST00000589605 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
RDH13-214ENST00000589605 ZNF277Q9NRM2 450 aaPredicted RBP16.37■□□□□ 0.21
RDH13-214ENST00000589605 HLFQ16534 295 aa16.36■□□□□ 0.21
RDH13-214ENST00000589605 LDHDQ86WU2 507 aa16.36■□□□□ 0.21
RDH13-214ENST00000589605 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
RDH13-214ENST00000589605 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
RDH13-214ENST00000589605 ADAMTSL1Q8N6G6 1762 aa16.36■□□□□ 0.21
RDH13-214ENST00000589605 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
RDH13-214ENST00000589605 PASKQ96RG2 1323 aa16.35■□□□□ 0.21
RDH13-214ENST00000589605 CNTNAP1P78357 1384 aa16.35■□□□□ 0.21
RDH13-214ENST00000589605 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
RDH13-214ENST00000589605 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
RDH13-214ENST00000589605 MIS18AQ9NYP9 233 aa16.34■□□□□ 0.21
RDH13-214ENST00000589605 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
RDH13-214ENST00000589605 NUP98P52948 1817 aa16.33■□□□□ 0.21
RDH13-214ENST00000589605 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
RDH13-214ENST00000589605 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
RDH13-214ENST00000589605 HACL1Q9UJ83 578 aa16.33■□□□□ 0.2
RDH13-214ENST00000589605 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
RDH13-214ENST00000589605 IARSP41252 1262 aaKnown RBP16.32■□□□□ 0.2
RDH13-214ENST00000589605 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
RDH13-214ENST00000589605 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
RDH13-214ENST00000589605 COL4A5P29400 1685 aa16.3■□□□□ 0.2
RDH13-214ENST00000589605 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
RDH13-214ENST00000589605 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
RDH13-214ENST00000589605 FZD9O00144 591 aa16.3■□□□□ 0.2
RDH13-214ENST00000589605 NEFMP07197 916 aa16.3■□□□□ 0.2
RDH13-214ENST00000589605 EPHX2P34913 555 aa16.3■□□□□ 0.2
RDH13-214ENST00000589605 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
RDH13-214ENST00000589605 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
RDH13-214ENST00000589605 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
RDH13-214ENST00000589605 ITGBL1O95965 494 aaPredicted RBP16.29■□□□□ 0.2
RDH13-214ENST00000589605 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
RDH13-214ENST00000589605 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
RDH13-214ENST00000589605 PSMD1Q99460 953 aa16.29■□□□□ 0.2
RDH13-214ENST00000589605 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
RDH13-214ENST00000589605 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
RDH13-214ENST00000589605 FOXN1O15353 648 aa16.28■□□□□ 0.2
RDH13-214ENST00000589605 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
RDH13-214ENST00000589605 GPC2Q8N158 579 aa16.28■□□□□ 0.2
RDH13-214ENST00000589605 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms