RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
CLPTM1-211ENST00000589347 NPHP1O15259 732 aa13.9□□□□□ -0.18
CLPTM1-211ENST00000589347 A1BGP04217 495 aa13.9□□□□□ -0.18
CLPTM1-211ENST00000589347 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
CLPTM1-211ENST00000589347 NFIXQ14938 502 aa13.9□□□□□ -0.18
CLPTM1-211ENST00000589347 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
CLPTM1-211ENST00000589347 SERPINB2P05120 415 aa13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
CLPTM1-211ENST00000589347 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 DICER1Q9UPY3 1922 aaKnown RBP13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
CLPTM1-211ENST00000589347 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 RGL2O15211 777 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 ST5P78524 1137 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 TBC1D9BQ66K14 1250 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 MIS18AQ9NYP9 233 aa13.87□□□□□ -0.19
CLPTM1-211ENST00000589347 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
CLPTM1-211ENST00000589347 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
CLPTM1-211ENST00000589347 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
CLPTM1-211ENST00000589347 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
CLPTM1-211ENST00000589347 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
CLPTM1-211ENST00000589347 PRDM10Q9NQV6 1147 aa13.86□□□□□ -0.19
CLPTM1-211ENST00000589347 FER1L6Q2WGJ9 1857 aa13.85□□□□□ -0.19
CLPTM1-211ENST00000589347 FOXN1O15353 648 aa13.85□□□□□ -0.19
CLPTM1-211ENST00000589347 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
CLPTM1-211ENST00000589347 RASSF7Q02833 373 aa13.85□□□□□ -0.19
CLPTM1-211ENST00000589347 CNBD1Q8NA66 436 aa13.85□□□□□ -0.19
CLPTM1-211ENST00000589347 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
CLPTM1-211ENST00000589347 ANP32CO43423 234 aa13.84□□□□□ -0.19
CLPTM1-211ENST00000589347 CHRNA5P30532 468 aa13.84□□□□□ -0.19
CLPTM1-211ENST00000589347 PDE6BP35913 854 aa13.84□□□□□ -0.19
CLPTM1-211ENST00000589347 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
CLPTM1-211ENST00000589347 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
CLPTM1-211ENST00000589347 POTECB2RU33 542 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 H0YIN7 160 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 LMNB1P20700 586 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 C2CD5Q86YS7 1000 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 CACNA1FO60840 1977 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 CNTNAP1P78357 1384 aa13.83□□□□□ -0.2
CLPTM1-211ENST00000589347 NBPF26B4DH59 902 aa13.82□□□□□ -0.2
CLPTM1-211ENST00000589347 NBPF10Q6P3W6 841 aaKnown RBP13.82□□□□□ -0.2
CLPTM1-211ENST00000589347 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
CLPTM1-211ENST00000589347 NBPF15Q8N660 670 aa13.82□□□□□ -0.2
CLPTM1-211ENST00000589347 SLX4Q8IY92 1834 aa13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 MYL6BP14649 208 aa13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 NIP7Q9Y221 180 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 LAS1LQ9Y4W2 734 aaKnown RBP13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
CLPTM1-211ENST00000589347 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
CLPTM1-211ENST00000589347 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
CLPTM1-211ENST00000589347 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
CLPTM1-211ENST00000589347 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
CLPTM1-211ENST00000589347 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
CLPTM1-211ENST00000589347 IBTKQ9P2D0 1353 aaPredicted RBP13.8□□□□□ -0.2
CLPTM1-211ENST00000589347 LAMB2P55268 1798 aa13.79□□□□□ -0.2
CLPTM1-211ENST00000589347 HOXB7P09629 217 aa13.79□□□□□ -0.2
CLPTM1-211ENST00000589347 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
CLPTM1-211ENST00000589347 ZNF622Q969S3 477 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLPTM1-211ENST00000589347 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
CLPTM1-211ENST00000589347 NFKBIEO00221 500 aa13.78□□□□□ -0.2
CLPTM1-211ENST00000589347 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-211ENST00000589347 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-211ENST00000589347 TPTE2Q6XPS3 522 aa13.78□□□□□ -0.2
CLPTM1-211ENST00000589347 CNKSR1Q969H4 720 aa13.78□□□□□ -0.2
CLPTM1-211ENST00000589347 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
CLPTM1-211ENST00000589347 TNRC18O15417 2968 aaPredicted RBP13.77□□□□□ -0.2
CLPTM1-211ENST00000589347 CHL1O00533 1208 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 GNAI1P63096 354 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 RIC1Q4ADV7 1423 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 STYK1Q6J9G0 422 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 MASTLQ96GX5 879 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 MRS2Q9HD23 443 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
CLPTM1-211ENST00000589347 PASKQ96RG2 1323 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 APAF1O14727 1248 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 ZBTB3Q9H5J0 574 aa13.76□□□□□ -0.21
CLPTM1-211ENST00000589347 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
CLPTM1-211ENST00000589347 HLFQ16534 295 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms