RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 KSR2Q6VAB6 950 aa15.52■□□□□ 0.08
DNMT1-218ENST00000589294 SMIM5Q71RC9 77 aa15.52■□□□□ 0.08
DNMT1-218ENST00000589294 SLC16A10Q8TF71 515 aa15.52■□□□□ 0.08
DNMT1-218ENST00000589294 NOB1Q9ULX3 412 aaKnown RBP15.52■□□□□ 0.08
DNMT1-218ENST00000589294 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
DNMT1-218ENST00000589294 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
DNMT1-218ENST00000589294 MSH5O43196 834 aa15.51■□□□□ 0.07
DNMT1-218ENST00000589294 CAMTA2O94983 1202 aa15.51■□□□□ 0.07
DNMT1-218ENST00000589294 FKBP5Q13451 457 aaPredicted RBP15.51■□□□□ 0.07
DNMT1-218ENST00000589294 UBR3Q6ZT12 1888 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 R3HDM1Q15032 1099 aaKnown RBP15.5■□□□□ 0.07
DNMT1-218ENST00000589294 USPL1Q5W0Q7 1092 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 GIGYF2Q6Y7W6 1299 aaKnown RBP15.5■□□□□ 0.07
DNMT1-218ENST00000589294 RIC3Q7Z5B4 369 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 NLGN1Q8N2Q7 840 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 ZNF652Q9Y2D9 606 aa15.5■□□□□ 0.07
DNMT1-218ENST00000589294 CENPBP07199 599 aaPredicted RBP15.49■□□□□ 0.07
DNMT1-218ENST00000589294 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
DNMT1-218ENST00000589294 API5Q9BZZ5 524 aaKnown RBP15.49■□□□□ 0.07
DNMT1-218ENST00000589294 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
DNMT1-218ENST00000589294 GYS1P13807 737 aa15.48■□□□□ 0.07
DNMT1-218ENST00000589294 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
DNMT1-218ENST00000589294 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.48■□□□□ 0.07
DNMT1-218ENST00000589294 SRP68Q9UHB9 627 aaKnown RBP15.48■□□□□ 0.07
DNMT1-218ENST00000589294 QSER1Q2KHR3 1735 aa15.48■□□□□ 0.07
DNMT1-218ENST00000589294 TRIM28Q13263 835 aaKnown RBP15.47■□□□□ 0.07
DNMT1-218ENST00000589294 TCIRG1Q13488 830 aa15.47■□□□□ 0.07
DNMT1-218ENST00000589294 HLFQ16534 295 aa15.47■□□□□ 0.07
DNMT1-218ENST00000589294 ATF7IPQ6VMQ6 1270 aa15.47■□□□□ 0.07
DNMT1-218ENST00000589294 DNAAF4Q8WXU2 420 aa15.47■□□□□ 0.07
DNMT1-218ENST00000589294 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-218ENST00000589294 METTL22Q9BUU2 404 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-218ENST00000589294 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
DNMT1-218ENST00000589294 MAP3K2Q9Y2U5 619 aa15.47■□□□□ 0.07
DNMT1-218ENST00000589294 MS4A1P11836 297 aa15.46■□□□□ 0.07
DNMT1-218ENST00000589294 NEXNQ0ZGT2 675 aa15.46■□□□□ 0.07
DNMT1-218ENST00000589294 ADCY9O60503 1353 aa15.46■□□□□ 0.07
DNMT1-218ENST00000589294 PSDA5PKW4 1024 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-218ENST00000589294 TM4SF1P30408 202 aa15.45■□□□□ 0.06
DNMT1-218ENST00000589294 FKBP8Q14318 412 aa15.45■□□□□ 0.06
DNMT1-218ENST00000589294 ZNF34Q8IZ26 560 aa15.45■□□□□ 0.06
DNMT1-218ENST00000589294 SETDB2Q96T68 719 aa15.45■□□□□ 0.06
DNMT1-218ENST00000589294 PDGFDQ9GZP0 370 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-218ENST00000589294 F6X3S4 739 aa15.44■□□□□ 0.06
DNMT1-218ENST00000589294 TRIM27P14373 513 aa15.44■□□□□ 0.06
DNMT1-218ENST00000589294 LINS1Q8NG48 757 aa15.44■□□□□ 0.06
DNMT1-218ENST00000589294 ISCA1Q9BUE6 129 aa15.44■□□□□ 0.06
DNMT1-218ENST00000589294 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
DNMT1-218ENST00000589294 TUBGCP6Q96RT7 1819 aa15.43■□□□□ 0.06
DNMT1-218ENST00000589294 CCT4P50991 539 aaKnown RBP15.43■□□□□ 0.06
DNMT1-218ENST00000589294 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
DNMT1-218ENST00000589294 TBC1D9BQ66K14 1250 aa15.43■□□□□ 0.06
DNMT1-218ENST00000589294 CCDC191Q8NCU4 936 aa15.43■□□□□ 0.06
DNMT1-218ENST00000589294 MYD88Q99836 296 aa15.43■□□□□ 0.06
DNMT1-218ENST00000589294 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
DNMT1-218ENST00000589294 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
DNMT1-218ENST00000589294 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
DNMT1-218ENST00000589294 NFIXQ14938 502 aa15.42■□□□□ 0.06
DNMT1-218ENST00000589294 BEND3Q5T5X7 828 aa15.42■□□□□ 0.06
DNMT1-218ENST00000589294 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
DNMT1-218ENST00000589294 DZIP1LQ8IYY4 767 aaKnown RBP15.42■□□□□ 0.06
DNMT1-218ENST00000589294 SRCIN1Q9C0H9 1055 aa15.42■□□□□ 0.06
DNMT1-218ENST00000589294 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
DNMT1-218ENST00000589294 C4AP0C0L4 1744 aa15.41■□□□□ 0.06
DNMT1-218ENST00000589294 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
DNMT1-218ENST00000589294 IGKV5-2P06315 115 aa15.41■□□□□ 0.06
DNMT1-218ENST00000589294 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
DNMT1-218ENST00000589294 PPP1R42Q7Z4L9 355 aa15.41■□□□□ 0.06
DNMT1-218ENST00000589294 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
DNMT1-218ENST00000589294 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
DNMT1-218ENST00000589294 ABCC4O15439 1325 aa15.41■□□□□ 0.06
DNMT1-218ENST00000589294 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
DNMT1-218ENST00000589294 NEURL1BA8MQ27 555 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 ATP5J2-PTCD1G3V325 749 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 PLIN1O60240 522 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 ZBTB7AO95365 584 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 GPTP24298 496 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 RRP1P56182 461 aaKnown RBP15.4■□□□□ 0.06
DNMT1-218ENST00000589294 TPTE2Q6XPS3 522 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
DNMT1-218ENST00000589294 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
DNMT1-218ENST00000589294 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
DNMT1-218ENST00000589294 NUP98P52948 1817 aa15.39■□□□□ 0.05
DNMT1-218ENST00000589294 MMP10P09238 476 aa15.39■□□□□ 0.05
DNMT1-218ENST00000589294 GCKRQ14397 625 aa15.39■□□□□ 0.05
DNMT1-218ENST00000589294 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
DNMT1-218ENST00000589294 CLUAP1Q96AJ1 413 aa15.39■□□□□ 0.05
DNMT1-218ENST00000589294 PARP3Q9Y6F1 533 aa15.39■□□□□ 0.05
DNMT1-218ENST00000589294 SCN7AQ01118 1682 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 CARMIL3Q8ND23 1372 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 POLRMTO00411 1230 aaKnown RBP15.38■□□□□ 0.05
DNMT1-218ENST00000589294 SERPINB2P05120 415 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 POLD1P28340 1107 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 CWF19L2Q2TBE0 894 aaKnown RBP15.38■□□□□ 0.05
DNMT1-218ENST00000589294 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 UTP14AQ9BVJ6 771 aaKnown RBP15.38■□□□□ 0.05
DNMT1-218ENST00000589294 SPON1Q9HCB6 807 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms