RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 CAMKK2Q96RR4 588 aa8.01□□□□□ -1.13
LINC01539-202ENST00000589293 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
LINC01539-202ENST00000589293 SPON1Q9HCB6 807 aa8.01□□□□□ -1.13
LINC01539-202ENST00000589293 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
LINC01539-202ENST00000589293 CENPJQ9HC77 1338 aaPredicted RBP8.01□□□□□ -1.13
LINC01539-202ENST00000589293 POLR3AO14802 1390 aaPredicted RBP8□□□□□ -1.13
LINC01539-202ENST00000589293 THSD7AQ9UPZ6 1657 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 C6orf229H3BNL8 230 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 ZPR1O75312 459 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 GCP02774 474 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 CSB-PGBD3P0DP91 1061 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 TOM1L2Q6ZVM7 507 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
LINC01539-202ENST00000589293 NKX2-3Q8TAU0 364 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 SALL2Q9Y467 1007 aaPredicted RBP8□□□□□ -1.13
LINC01539-202ENST00000589293 PPIP5K1Q6PFW1 1433 aa8□□□□□ -1.13
LINC01539-202ENST00000589293 BRD4O60885 1362 aaPredicted RBP7.99□□□□□ -1.13
LINC01539-202ENST00000589293 CPDO75976 1380 aa7.99□□□□□ -1.13
LINC01539-202ENST00000589293 NR1I2O75469 434 aa7.99□□□□□ -1.13
LINC01539-202ENST00000589293 ITGBL1O95965 494 aaPredicted RBP7.99□□□□□ -1.13
LINC01539-202ENST00000589293 YY1P25490 414 aa7.99□□□□□ -1.13
LINC01539-202ENST00000589293 DDB1Q16531 1140 aa7.99□□□□□ -1.13
LINC01539-202ENST00000589293 ARHGEF28Q8N1W1 1705 aaKnown RBP7.99□□□□□ -1.13
LINC01539-202ENST00000589293 PRDM9Q9NQV7 894 aa7.99□□□□□ -1.13
LINC01539-202ENST00000589293 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
LINC01539-202ENST00000589293 OVOS2A0A0G2JMS6 1433 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 OVOS2A0A0J9YW53 1432 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 OVOS2Q6IE36 1432 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 CDCA7Q9BWT1 371 aaPredicted RBP7.98□□□□□ -1.13
LINC01539-202ENST00000589293 IL21Q9HBE4 155 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 USP19O94966 1318 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 EVC2Q86UK5 1308 aa7.98□□□□□ -1.13
LINC01539-202ENST00000589293 TNS1Q9HBL0 1735 aaKnown RBP7.98□□□□□ -1.13
LINC01539-202ENST00000589293 CRB1P82279 1406 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
LINC01539-202ENST00000589293 KCNQ2O43526 872 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 KCNH5Q8NCM2 988 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 PRR7Q8TB68 274 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
LINC01539-202ENST00000589293 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 CABP1Q9NZU7 370 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 CRYBG1Q9Y4K1 1723 aa7.97□□□□□ -1.13
LINC01539-202ENST00000589293 FMNL1O95466 1100 aaPredicted RBP7.96□□□□□ -1.14
LINC01539-202ENST00000589293 CTDSPL2Q05D32 466 aa7.96□□□□□ -1.14
LINC01539-202ENST00000589293 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
LINC01539-202ENST00000589293 Q3C1V9 767 aa7.96□□□□□ -1.14
LINC01539-202ENST00000589293 SPSB2Q99619 263 aa7.96□□□□□ -1.14
LINC01539-202ENST00000589293 NRKQ7Z2Y5 1582 aa7.96□□□□□ -1.14
LINC01539-202ENST00000589293 AATKQ6ZMQ8 1374 aa7.96□□□□□ -1.14
LINC01539-202ENST00000589293 CAMTA1Q9Y6Y1 1673 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 KIAA1210Q9ULL0 1709 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 COL5A2P05997 1499 aaPredicted RBP7.95□□□□□ -1.14
LINC01539-202ENST00000589293 EXOC5O00471 708 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 ADH1BP00325 375 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 MCM6Q14566 821 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 HMX1Q9NP08 348 aaPredicted RBP7.95□□□□□ -1.14
LINC01539-202ENST00000589293 STK32BQ9NY57 414 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 TOPAZ1Q8N9V7 1692 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 NINLQ9Y2I6 1382 aa7.95□□□□□ -1.14
LINC01539-202ENST00000589293 SPDYE5A6NIY4 337 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 PLSCR1O15162 318 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 USP17L8P0C7I0 530 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 MSS51Q4VC12 460 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 MTMR14Q8NCE2 650 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 LRRN4Q8WUT4 740 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 WDR17Q8IZU2 1322 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 USP6P35125 1406 aa7.94□□□□□ -1.14
LINC01539-202ENST00000589293 AP1G2O75843 785 aa7.93□□□□□ -1.14
LINC01539-202ENST00000589293 TIMELESSQ9UNS1 1208 aa7.93□□□□□ -1.14
LINC01539-202ENST00000589293 TTC21AQ8NDW8 1320 aa7.93□□□□□ -1.14
LINC01539-202ENST00000589293 ROCK2O75116 1388 aaKnown RBP7.93□□□□□ -1.14
LINC01539-202ENST00000589293 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
LINC01539-202ENST00000589293 GPR37L1O60883 481 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 DXOO77932 396 aaKnown RBP7.92□□□□□ -1.14
LINC01539-202ENST00000589293 MMP16P51512 607 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 TMEM259Q4ZIN3 620 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 CARD10Q9BWT7 1032 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 RREB1Q92766 1687 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 QRICH2Q9H0J4 1663 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 NUP188Q5SRE5 1749 aa7.92□□□□□ -1.14
LINC01539-202ENST00000589293 ZBTB7AO95365 584 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 S1PR4O95977 384 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 JUNDP17535 347 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 NEUROD1Q13562 356 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 DESI1Q6ICB0 168 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 HDGFL2Q7Z4V5 671 aaPredicted RBP7.91□□□□□ -1.14
LINC01539-202ENST00000589293 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 EPS8L1Q8TE68 723 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 NLRP2Q9NX02 1062 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 TTC21BQ7Z4L5 1316 aa7.91□□□□□ -1.14
LINC01539-202ENST00000589293 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
LINC01539-202ENST00000589293 CPSF1Q10570 1443 aaKnown RBP7.91□□□□□ -1.14
LINC01539-202ENST00000589293 KCNC4Q03721 635 aa7.9□□□□□ -1.14
LINC01539-202ENST00000589293 TXNRD1Q16881 649 aa7.9□□□□□ -1.14
LINC01539-202ENST00000589293 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms