RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 TAF1LQ8IZX4 1826 aa31.3■■■□□ 2.6
RFX1-205ENST00000589239 CCT4P50991 539 aaKnown RBP31.3■■■□□ 2.6
RFX1-205ENST00000589239 PLBD2Q8NHP8 589 aa31.3■■■□□ 2.6
RFX1-205ENST00000589239 ZBTB3Q9H5J0 574 aa31.3■■■□□ 2.6
RFX1-205ENST00000589239 RC3H1Q5TC82 1133 aaKnown RBP31.29■■■□□ 2.6
RFX1-205ENST00000589239 NPM2Q86SE8 214 aaKnown RBP31.29■■■□□ 2.6
RFX1-205ENST00000589239 PXDNLA1KZ92 1463 aa31.29■■■□□ 2.6
RFX1-205ENST00000589239 BEND3Q5T5X7 828 aa31.28■■■□□ 2.6
RFX1-205ENST00000589239 KIF6Q6ZMV9 814 aa31.27■■■□□ 2.6
RFX1-205ENST00000589239 C4BP0C0L5 1744 aa31.26■■■□□ 2.59
RFX1-205ENST00000589239 GNPATO15228 680 aa31.26■■■□□ 2.59
RFX1-205ENST00000589239 TBC1D2BQ9UPU7 963 aa31.26■■■□□ 2.59
RFX1-205ENST00000589239 ZBTB7BO15156 539 aaPredicted RBP31.25■■■□□ 2.59
RFX1-205ENST00000589239 SMIM5Q71RC9 77 aa31.25■■■□□ 2.59
RFX1-205ENST00000589239 SRCIN1Q9C0H9 1055 aa31.25■■■□□ 2.59
RFX1-205ENST00000589239 DZIP3Q86Y13 1208 aaKnown RBP31.25■■■□□ 2.59
RFX1-205ENST00000589239 METTL22Q9BUU2 404 aaPredicted RBP31.25■■■□□ 2.59
RFX1-205ENST00000589239 MYD88Q99836 296 aa31.24■■■□□ 2.59
RFX1-205ENST00000589239 COL15A1P39059 1388 aa31.24■■■□□ 2.59
RFX1-205ENST00000589239 ATP10DQ9P241 1426 aa31.24■■■□□ 2.59
RFX1-205ENST00000589239 ARFGEF2Q9Y6D5 1785 aa31.23■■■□□ 2.59
RFX1-205ENST00000589239 RPS6KA4O75676 772 aa31.23■■■□□ 2.59
RFX1-205ENST00000589239 EN1Q05925 392 aaPredicted RBP31.23■■■□□ 2.59
RFX1-205ENST00000589239 CWF19L2Q2TBE0 894 aaKnown RBP31.23■■■□□ 2.59
RFX1-205ENST00000589239 AMIGO3Q86WK7 504 aa31.23■■■□□ 2.59
RFX1-205ENST00000589239 AK7Q96M32 723 aa31.23■■■□□ 2.59
RFX1-205ENST00000589239 MAP3K15Q6ZN16 1313 aa31.23■■■□□ 2.59
RFX1-205ENST00000589239 NEXNQ0ZGT2 675 aa31.22■■■□□ 2.59
RFX1-205ENST00000589239 SF3B2Q13435 895 aaKnown RBP31.22■■■□□ 2.59
RFX1-205ENST00000589239 IGKV5-2P06315 115 aa31.21■■■□□ 2.59
RFX1-205ENST00000589239 NUP188Q5SRE5 1749 aa31.21■■■□□ 2.59
RFX1-205ENST00000589239 LINS1Q8NG48 757 aa31.21■■■□□ 2.59
RFX1-205ENST00000589239 ZBTB40Q9NUA8 1239 aa31.21■■■□□ 2.59
RFX1-205ENST00000589239 RTCBQ9Y3I0 505 aaKnown RBP31.21■■■□□ 2.59
RFX1-205ENST00000589239 MEIS3Q99687 375 aa31.21■■■□□ 2.59
RFX1-205ENST00000589239 EZH2Q15910 746 aaKnown RBP31.2■■■□□ 2.59
RFX1-205ENST00000589239 HLFQ16534 295 aa31.2■■■□□ 2.59
RFX1-205ENST00000589239 PPP4R2Q9NY27 417 aa31.2■■■□□ 2.59
RFX1-205ENST00000589239 N4BP2Q86UW6 1770 aaPredicted RBP31.2■■■□□ 2.59
RFX1-205ENST00000589239 CAMKK2Q96RR4 588 aa31.19■■■□□ 2.58
RFX1-205ENST00000589239 ATP5J2-PTCD1G3V325 749 aa31.19■■■□□ 2.58
RFX1-205ENST00000589239 RGPD3A6NKT7 1758 aaPredicted RBP31.19■■■□□ 2.58
RFX1-205ENST00000589239 RGPD4Q7Z3J3 1758 aa31.19■■■□□ 2.58
RFX1-205ENST00000589239 ALDH1L1O75891 902 aa31.17■■■□□ 2.58
RFX1-205ENST00000589239 DEFB132Q7Z7B7 95 aa31.17■■■□□ 2.58
RFX1-205ENST00000589239 NEURL1BA8MQ27 555 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 PHF14O94880 888 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 GIGYF2Q6Y7W6 1299 aaKnown RBP31.16■■■□□ 2.58
RFX1-205ENST00000589239 USP44Q9H0E7 712 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 CHMP4BQ9H444 224 aaKnown RBP31.16■■■□□ 2.58
RFX1-205ENST00000589239 ERVV-1B6SEH8 477 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 CAMTA2O94983 1202 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 BAG6P46379 1132 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 C1orf115Q9H7X2 142 aa31.16■■■□□ 2.58
RFX1-205ENST00000589239 A0A087WZG4 1122 aa31.15■■■□□ 2.58
RFX1-205ENST00000589239 AAMPQ13685 434 aa31.15■■■□□ 2.58
RFX1-205ENST00000589239 TCIRG1Q13488 830 aa31.15■■■□□ 2.58
RFX1-205ENST00000589239 B4GALNT3Q6L9W6 998 aa31.15■■■□□ 2.58
RFX1-205ENST00000589239 HMGB2P26583 209 aaKnown RBP31.14■■■□□ 2.58
RFX1-205ENST00000589239 ARHGEF1Q92888 912 aaKnown RBP31.13■■■□□ 2.57
RFX1-205ENST00000589239 ZNF827Q17R98 1081 aa31.13■■■□□ 2.57
RFX1-205ENST00000589239 PCDHB15Q9Y5E8 787 aa31.13■■■□□ 2.57
RFX1-205ENST00000589239 TRAPPC3LQ5T215 181 aa31.12■■■□□ 2.57
RFX1-205ENST00000589239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.12■■■□□ 2.57
RFX1-205ENST00000589239 NBPF7P0C2Y1 421 aaPredicted RBP31.12■■■□□ 2.57
RFX1-205ENST00000589239 GCKRQ14397 625 aa31.12■■■□□ 2.57
RFX1-205ENST00000589239 CCDC136Q96JN2 1154 aa31.12■■■□□ 2.57
RFX1-205ENST00000589239 ISCA1Q9BUE6 129 aa31.11■■■□□ 2.57
RFX1-205ENST00000589239 C9orf78Q9NZ63 289 aaPredicted RBP31.11■■■□□ 2.57
RFX1-205ENST00000589239 AKT1S1Q96B36 256 aa31.1■■■□□ 2.57
RFX1-205ENST00000589239 UBR3Q6ZT12 1888 aa31.1■■■□□ 2.57
RFX1-205ENST00000589239 GNAI3P08754 354 aa31.1■■■□□ 2.57
RFX1-205ENST00000589239 CCDC125Q86Z20 511 aa31.1■■■□□ 2.57
RFX1-205ENST00000589239 SRP68Q9UHB9 627 aaKnown RBP31.1■■■□□ 2.57
RFX1-205ENST00000589239 GPTP24298 496 aa31.09■■■□□ 2.57
RFX1-205ENST00000589239 HSP90AB3PQ58FF7 597 aa31.09■■■□□ 2.57
RFX1-205ENST00000589239 NARFQ9UHQ1 456 aa31.09■■■□□ 2.57
RFX1-205ENST00000589239 GRM8O00222 908 aa31.09■■■□□ 2.57
RFX1-205ENST00000589239 TFCP2L1Q9NZI6 479 aa31.09■■■□□ 2.57
RFX1-205ENST00000589239 NUP98P52948 1817 aa31.08■■■□□ 2.57
RFX1-205ENST00000589239 UBTFL1P0CB47 393 aaPredicted RBP31.08■■■□□ 2.57
RFX1-205ENST00000589239 RFC4P35249 363 aa31.08■■■□□ 2.57
RFX1-205ENST00000589239 USPL1Q5W0Q7 1092 aa31.08■■■□□ 2.57
RFX1-205ENST00000589239 ADRA2BP18089 450 aa31.07■■■□□ 2.56
RFX1-205ENST00000589239 SSFA2P28290 1259 aa31.07■■■□□ 2.56
RFX1-205ENST00000589239 CCDC191Q8NCU4 936 aa31.07■■■□□ 2.56
RFX1-205ENST00000589239 CWC25Q9NXE8 425 aaPredicted RBP31.07■■■□□ 2.56
RFX1-205ENST00000589239 AFDNP55196 1824 aaKnown RBP31.07■■■□□ 2.56
RFX1-205ENST00000589239 ZPR1O75312 459 aa31.07■■■□□ 2.56
RFX1-205ENST00000589239 IBTKQ9P2D0 1353 aaPredicted RBP31.06■■■□□ 2.56
RFX1-205ENST00000589239 TRIM28Q13263 835 aaKnown RBP31.06■■■□□ 2.56
RFX1-205ENST00000589239 BCL2L12Q9HB09 334 aa31.06■■■□□ 2.56
RFX1-205ENST00000589239 ZNF652Q9Y2D9 606 aa31.06■■■□□ 2.56
RFX1-205ENST00000589239 BCORQ6W2J9 1755 aa31.05■■■□□ 2.56
RFX1-205ENST00000589239 GNAI2P04899 355 aa31.05■■■□□ 2.56
RFX1-205ENST00000589239 JARID2Q92833 1246 aaPredicted RBP31.05■■■□□ 2.56
RFX1-205ENST00000589239 C4AP0C0L4 1744 aa31.05■■■□□ 2.56
RFX1-205ENST00000589239 USP42Q9H9J4 1324 aaKnown RBP31.04■■■□□ 2.56
RFX1-205ENST00000589239 ZNF34Q8IZ26 560 aa31.04■■■□□ 2.56
RFX1-205ENST00000589239 LRRFIP2Q9Y608 721 aaKnown RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms