RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 PDIA6Q15084 440 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 NECTIN2Q92692 538 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
PTPN2-208ENST00000589216 HLFQ16534 295 aa12.9□□□□□ -0.34
PTPN2-208ENST00000589216 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
PTPN2-208ENST00000589216 ERBB4Q15303 1308 aa12.89□□□□□ -0.35
PTPN2-208ENST00000589216 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
PTPN2-208ENST00000589216 TGFB2P61812 414 aa12.89□□□□□ -0.35
PTPN2-208ENST00000589216 PRR5LQ6MZQ0 368 aa12.89□□□□□ -0.35
PTPN2-208ENST00000589216 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
PTPN2-208ENST00000589216 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
PTPN2-208ENST00000589216 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
PTPN2-208ENST00000589216 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
PTPN2-208ENST00000589216 LAMB2P55268 1798 aa12.88□□□□□ -0.35
PTPN2-208ENST00000589216 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
PTPN2-208ENST00000589216 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
PTPN2-208ENST00000589216 ADCY9O60503 1353 aa12.87□□□□□ -0.35
PTPN2-208ENST00000589216 WWC1Q8IX03 1113 aa12.87□□□□□ -0.35
PTPN2-208ENST00000589216 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
PTPN2-208ENST00000589216 TSR2Q969E8 191 aaKnown RBP12.87□□□□□ -0.35
PTPN2-208ENST00000589216 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
PTPN2-208ENST00000589216 BCS1LQ9Y276 419 aa12.87□□□□□ -0.35
PTPN2-208ENST00000589216 SLX4Q8IY92 1834 aa12.86□□□□□ -0.35
PTPN2-208ENST00000589216 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
PTPN2-208ENST00000589216 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
PTPN2-208ENST00000589216 SETDB2Q96T68 719 aa12.86□□□□□ -0.35
PTPN2-208ENST00000589216 SBF1O95248 1867 aa12.86□□□□□ -0.35
PTPN2-208ENST00000589216 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 GNAI1P63096 354 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTPN2-208ENST00000589216 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
PTPN2-208ENST00000589216 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-208ENST00000589216 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
PTPN2-208ENST00000589216 ERVV-1B6SEH8 477 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 RGL2O15211 777 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 HOXB7P09629 217 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 GPTP24298 496 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 NBPF5PQ86XG9 351 aaPredicted RBP12.84□□□□□ -0.35
PTPN2-208ENST00000589216 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 TSPYL6Q8N831 410 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 XAGE3Q8WTP9 111 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
PTPN2-208ENST00000589216 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
PTPN2-208ENST00000589216 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
PTPN2-208ENST00000589216 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
PTPN2-208ENST00000589216 AIMP1Q12904 312 aaKnown RBP12.83□□□□□ -0.36
PTPN2-208ENST00000589216 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
PTPN2-208ENST00000589216 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPN2-208ENST00000589216 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
PTPN2-208ENST00000589216 FANCIQ9NVI1 1328 aa12.83□□□□□ -0.36
PTPN2-208ENST00000589216 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
PTPN2-208ENST00000589216 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
PTPN2-208ENST00000589216 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
PTPN2-208ENST00000589216 COPS6Q7L5N1 327 aa12.82□□□□□ -0.36
PTPN2-208ENST00000589216 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
PTPN2-208ENST00000589216 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
PTPN2-208ENST00000589216 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
PTPN2-208ENST00000589216 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
PTPN2-208ENST00000589216 NTSR2O95665 410 aa12.81□□□□□ -0.36
PTPN2-208ENST00000589216 ST5P78524 1137 aa12.81□□□□□ -0.36
PTPN2-208ENST00000589216 ZNF34Q8IZ26 560 aa12.81□□□□□ -0.36
PTPN2-208ENST00000589216 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
PTPN2-208ENST00000589216 IL16Q14005 1332 aa12.81□□□□□ -0.36
PTPN2-208ENST00000589216 COL4A1P02462 1669 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 NPHP1O15259 732 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 RASSF7Q02833 373 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 ERFEQ4G0M1 354 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 TAF1P21675 1872 aa12.8□□□□□ -0.36
PTPN2-208ENST00000589216 H0YIN7 160 aa12.79□□□□□ -0.36
PTPN2-208ENST00000589216 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
PTPN2-208ENST00000589216 SRGNP10124 158 aa12.79□□□□□ -0.36
PTPN2-208ENST00000589216 PDE6BP35913 854 aa12.79□□□□□ -0.36
PTPN2-208ENST00000589216 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
PTPN2-208ENST00000589216 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
PTPN2-208ENST00000589216 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
PTPN2-208ENST00000589216 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
PTPN2-208ENST00000589216 PRELPP51888 382 aa12.78□□□□□ -0.36
PTPN2-208ENST00000589216 ARHGAP27Q6ZUM4 889 aa12.78□□□□□ -0.36
PTPN2-208ENST00000589216 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
PTPN2-208ENST00000589216 ZNF622Q969S3 477 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPN2-208ENST00000589216 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
PTPN2-208ENST00000589216 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
PTPN2-208ENST00000589216 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
PTPN2-208ENST00000589216 NFKBIEO00221 500 aa12.77□□□□□ -0.37
PTPN2-208ENST00000589216 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
PTPN2-208ENST00000589216 TPTE2Q6XPS3 522 aa12.77□□□□□ -0.37
PTPN2-208ENST00000589216 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms