RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 NLGN1Q8N2Q7 840 aa11.88□□□□□ -0.51
ZNF440-206ENST00000588954 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
ZNF440-206ENST00000588954 CHPF2Q9P2E5 772 aa11.88□□□□□ -0.51
ZNF440-206ENST00000588954 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
ZNF440-206ENST00000588954 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
ZNF440-206ENST00000588954 VAMP4O75379 141 aa11.87□□□□□ -0.51
ZNF440-206ENST00000588954 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
ZNF440-206ENST00000588954 TRMT2AQ8IZ69 625 aaKnown RBP11.87□□□□□ -0.51
ZNF440-206ENST00000588954 ZNF652Q9Y2D9 606 aa11.87□□□□□ -0.51
ZNF440-206ENST00000588954 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
ZNF440-206ENST00000588954 PDIA6Q15084 440 aa11.86□□□□□ -0.51
ZNF440-206ENST00000588954 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
ZNF440-206ENST00000588954 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
ZNF440-206ENST00000588954 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 ERVV-1B6SEH8 477 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 ANXA1P04083 346 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
ZNF440-206ENST00000588954 GYS1P13807 737 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 AIMP1Q12904 312 aaKnown RBP11.85□□□□□ -0.51
ZNF440-206ENST00000588954 PROSER3Q2NL68 480 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
ZNF440-206ENST00000588954 YTHDC1Q96MU7 727 aaKnown RBP11.85□□□□□ -0.51
ZNF440-206ENST00000588954 PPP1R1BQ9UD71 204 aaPredicted RBP11.85□□□□□ -0.51
ZNF440-206ENST00000588954 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
ZNF440-206ENST00000588954 TCERG1O14776 1098 aaKnown RBP11.84□□□□□ -0.51
ZNF440-206ENST00000588954 RGL2O15211 777 aa11.84□□□□□ -0.51
ZNF440-206ENST00000588954 CAMTA2O94983 1202 aa11.84□□□□□ -0.51
ZNF440-206ENST00000588954 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
ZNF440-206ENST00000588954 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
ZNF440-206ENST00000588954 TTLL7Q6ZT98 887 aa11.83□□□□□ -0.52
ZNF440-206ENST00000588954 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
ZNF440-206ENST00000588954 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
ZNF440-206ENST00000588954 MMP10P09238 476 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 SETDB2Q96T68 719 aa11.82□□□□□ -0.52
ZNF440-206ENST00000588954 NPHP1O15259 732 aa11.81□□□□□ -0.52
ZNF440-206ENST00000588954 PTGER2P43116 358 aa11.81□□□□□ -0.52
ZNF440-206ENST00000588954 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
ZNF440-206ENST00000588954 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
ZNF440-206ENST00000588954 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
ZNF440-206ENST00000588954 PHAXQ9H814 394 aaKnown RBP11.81□□□□□ -0.52
ZNF440-206ENST00000588954 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
ZNF440-206ENST00000588954 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 TM4SF1P30408 202 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 FLIIQ13045 1269 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
ZNF440-206ENST00000588954 NFIXQ14938 502 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 HLFQ16534 295 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 TBC1D9BQ66K14 1250 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 SMC4Q9NTJ3 1288 aa11.8□□□□□ -0.52
ZNF440-206ENST00000588954 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
ZNF440-206ENST00000588954 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
ZNF440-206ENST00000588954 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
ZNF440-206ENST00000588954 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
ZNF440-206ENST00000588954 SERPINB2P05120 415 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 GTF2E1P29083 439 aaPredicted RBP11.78□□□□□ -0.52
ZNF440-206ENST00000588954 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 PARP10Q53GL7 1025 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 G2E3Q7L622 706 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
ZNF440-206ENST00000588954 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 NYXQ9GZU5 481 aa11.78□□□□□ -0.52
ZNF440-206ENST00000588954 GPTP24298 496 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.53
ZNF440-206ENST00000588954 DDR1Q08345 913 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 ZNF34Q8IZ26 560 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 MRPL50Q8N5N7 158 aaKnown RBP11.77□□□□□ -0.53
ZNF440-206ENST00000588954 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 ATP10DQ9P241 1426 aa11.77□□□□□ -0.53
ZNF440-206ENST00000588954 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 LRP5O75197 1615 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 ST5P78524 1137 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 MYD88Q99836 296 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
ZNF440-206ENST00000588954 PTPRCP08575 1304 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
ZNF440-206ENST00000588954 IPO8O15397 1037 aaKnown RBP11.75□□□□□ -0.53
ZNF440-206ENST00000588954 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
ZNF440-206ENST00000588954 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms