RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
MBD1-217ENST00000588937 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 ST18O60284 1047 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 CHMLP26374 656 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
MBD1-217ENST00000588937 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
MBD1-217ENST00000588937 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
MBD1-217ENST00000588937 IL2RBP14784 551 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
MBD1-217ENST00000588937 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
MBD1-217ENST00000588937 ANKRD13DQ6ZTN6 518 aa18.64■□□□□ 0.57
MBD1-217ENST00000588937 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
MBD1-217ENST00000588937 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
MBD1-217ENST00000588937 NEURL1BA8MQ27 555 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 CD2BP2O95400 341 aaKnown RBP18.63■□□□□ 0.57
MBD1-217ENST00000588937 IGKV5-2P06315 115 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 CNTROBQ8N137 903 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 SUCLG2Q96I99 432 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 MCM4P33991 863 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 EVA1CP58658 441 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 PI4K2BQ8TCG2 481 aa18.63■□□□□ 0.57
MBD1-217ENST00000588937 JCADQ9P266 1359 aa18.62■□□□□ 0.57
MBD1-217ENST00000588937 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
MBD1-217ENST00000588937 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
MBD1-217ENST00000588937 ANAPC15P60006 121 aa18.62■□□□□ 0.57
MBD1-217ENST00000588937 GCKRQ14397 625 aa18.62■□□□□ 0.57
MBD1-217ENST00000588937 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
MBD1-217ENST00000588937 MYD88Q99836 296 aa18.62■□□□□ 0.57
MBD1-217ENST00000588937 NRAPQ86VF7 1730 aa18.61■□□□□ 0.57
MBD1-217ENST00000588937 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
MBD1-217ENST00000588937 BICC1Q9H694 974 aaKnown RBP18.61■□□□□ 0.57
MBD1-217ENST00000588937 BTG4Q9NY30 223 aa18.61■□□□□ 0.57
MBD1-217ENST00000588937 UBR2Q8IWV8 1755 aa18.61■□□□□ 0.57
MBD1-217ENST00000588937 GLI3P10071 1580 aa18.6■□□□□ 0.57
MBD1-217ENST00000588937 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
MBD1-217ENST00000588937 IFIT2P09913 472 aaKnown RBP18.6■□□□□ 0.57
MBD1-217ENST00000588937 PAPPAQ13219 1627 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
MBD1-217ENST00000588937 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 COL15A1P39059 1388 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 MCM2P49736 904 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 KAZALD1Q96I82 304 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 GBP4Q96PP9 640 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 ANO2Q9NQ90 1003 aa18.59■□□□□ 0.57
MBD1-217ENST00000588937 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.57
MBD1-217ENST00000588937 FBXO41Q8TF61 875 aa18.58■□□□□ 0.57
MBD1-217ENST00000588937 STRN4Q9NRL3 753 aa18.58■□□□□ 0.57
MBD1-217ENST00000588937 ECHDC1Q9NTX5 307 aa18.58■□□□□ 0.57
MBD1-217ENST00000588937 SHANK3Q9BYB0 1731 aa18.58■□□□□ 0.57
MBD1-217ENST00000588937 SLIT2O94813 1529 aa18.58■□□□□ 0.57
MBD1-217ENST00000588937 PTMSP20962 102 aa18.58■□□□□ 0.56
MBD1-217ENST00000588937 IL17RAQ96F46 866 aa18.57■□□□□ 0.56
MBD1-217ENST00000588937 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
MBD1-217ENST00000588937 PA2G4Q9UQ80 394 aaKnown RBP18.57■□□□□ 0.56
MBD1-217ENST00000588937 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
MBD1-217ENST00000588937 WNK3Q9BYP7 1800 aa18.56■□□□□ 0.56
MBD1-217ENST00000588937 SPATA31A6Q5VVP1 1343 aa18.56■□□□□ 0.56
MBD1-217ENST00000588937 DDX54Q8TDD1 881 aaKnown RBP18.55■□□□□ 0.56
MBD1-217ENST00000588937 RUFY2Q8WXA3 655 aa18.55■□□□□ 0.56
MBD1-217ENST00000588937 KCPQ6ZWJ8 1503 aa18.55■□□□□ 0.56
MBD1-217ENST00000588937 AACSQ86V21 672 aa18.55■□□□□ 0.56
MBD1-217ENST00000588937 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
MBD1-217ENST00000588937 SGSM2O43147 1006 aa18.54■□□□□ 0.56
MBD1-217ENST00000588937 NUCB2P80303 420 aa18.54■□□□□ 0.56
MBD1-217ENST00000588937 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
MBD1-217ENST00000588937 SASH1O94885 1247 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 MAP4K4O95819 1239 aaPredicted RBP18.53■□□□□ 0.56
MBD1-217ENST00000588937 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
MBD1-217ENST00000588937 TNS2Q63HR2 1409 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 HSPA1LP34931 641 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 NEK4P51957 841 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 KIAA1211Q6ZU35 1233 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
MBD1-217ENST00000588937 HIP1O00291 1037 aa18.52■□□□□ 0.55
MBD1-217ENST00000588937 HSPA4P34932 840 aa18.52■□□□□ 0.55
MBD1-217ENST00000588937 PIP4K2AP48426 406 aaPredicted RBP18.52■□□□□ 0.55
MBD1-217ENST00000588937 RABL6Q3YEC7 729 aaPredicted RBP18.52■□□□□ 0.55
MBD1-217ENST00000588937 DIAPH3Q9NSV4 1193 aa18.52■□□□□ 0.55
MBD1-217ENST00000588937 A0A087WZG4 1122 aa18.51■□□□□ 0.55
MBD1-217ENST00000588937 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
MBD1-217ENST00000588937 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
MBD1-217ENST00000588937 RAD50Q92878 1312 aa18.51■□□□□ 0.55
MBD1-217ENST00000588937 NUP188Q5SRE5 1749 aa18.51■□□□□ 0.55
MBD1-217ENST00000588937 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
MBD1-217ENST00000588937 NBPF14Q5TI25 921 aa18.5■□□□□ 0.55
MBD1-217ENST00000588937 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
MBD1-217ENST00000588937 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
MBD1-217ENST00000588937 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
MBD1-217ENST00000588937 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
MBD1-217ENST00000588937 TEX13AQ9BXU3 409 aaPredicted RBP18.5■□□□□ 0.55
MBD1-217ENST00000588937 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.5■□□□□ 0.55
MBD1-217ENST00000588937 TRAK2O60296 914 aa18.5■□□□□ 0.55
MBD1-217ENST00000588937 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms