RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 HLFQ16534 295 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 TBC1D9BQ66K14 1250 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 NRXN2Q9P2S2 1712 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 NUP98P52948 1817 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 A0A087WZG4 1122 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
DNMT1-215ENST00000588913 POLRMTO00411 1230 aaKnown RBP22.7■■□□□ 1.22
DNMT1-215ENST00000588913 HDGFL1Q5TGJ6 251 aa22.69■■□□□ 1.22
DNMT1-215ENST00000588913 BICDL1Q6ZP65 573 aa22.69■■□□□ 1.22
DNMT1-215ENST00000588913 ERBB4Q15303 1308 aa22.68■■□□□ 1.22
DNMT1-215ENST00000588913 HOXB7P09629 217 aa22.68■■□□□ 1.22
DNMT1-215ENST00000588913 N4BP2Q86UW6 1770 aaPredicted RBP22.67■■□□□ 1.22
DNMT1-215ENST00000588913 TCERG1O14776 1098 aaKnown RBP22.67■■□□□ 1.22
DNMT1-215ENST00000588913 CDCA7LQ96GN5 454 aa22.67■■□□□ 1.22
DNMT1-215ENST00000588913 C10orf71Q711Q0 1435 aa22.67■■□□□ 1.22
DNMT1-215ENST00000588913 CARMIL3Q8ND23 1372 aa22.66■■□□□ 1.22
DNMT1-215ENST00000588913 EXOSC9Q06265 439 aaKnown RBP22.66■■□□□ 1.22
DNMT1-215ENST00000588913 ZBTB3Q9H5J0 574 aa22.66■■□□□ 1.22
DNMT1-215ENST00000588913 DDX21Q9NR30 783 aaKnown RBP eCLIP22.66■■□□□ 1.22
DNMT1-215ENST00000588913 ANKRD31Q8N7Z5 1873 aa22.65■■□□□ 1.22
DNMT1-215ENST00000588913 XAGE3Q8WTP9 111 aa22.65■■□□□ 1.22
DNMT1-215ENST00000588913 PARP3Q9Y6F1 533 aa22.65■■□□□ 1.22
DNMT1-215ENST00000588913 COPS6Q7L5N1 327 aa22.64■■□□□ 1.22
DNMT1-215ENST00000588913 CCDC24Q8N4L8 307 aa22.64■■□□□ 1.22
DNMT1-215ENST00000588913 MAP3K15Q6ZN16 1313 aa22.64■■□□□ 1.21
DNMT1-215ENST00000588913 AIMP1Q12904 312 aaKnown RBP22.63■■□□□ 1.21
DNMT1-215ENST00000588913 TWISTNBQ3B726 338 aaPredicted RBP22.63■■□□□ 1.21
DNMT1-215ENST00000588913 PHAXQ9H814 394 aaKnown RBP22.63■■□□□ 1.21
DNMT1-215ENST00000588913 ZBED9Q6R2W3 1325 aa22.62■■□□□ 1.21
DNMT1-215ENST00000588913 PXDNLA1KZ92 1463 aa22.62■■□□□ 1.21
DNMT1-215ENST00000588913 SERPINB2P05120 415 aa22.62■■□□□ 1.21
DNMT1-215ENST00000588913 RBM19Q9Y4C8 960 aaKnown RBP22.62■■□□□ 1.21
DNMT1-215ENST00000588913 NPM2Q86SE8 214 aaKnown RBP22.61■■□□□ 1.21
DNMT1-215ENST00000588913 WWC3Q9ULE0 1092 aa22.61■■□□□ 1.21
DNMT1-215ENST00000588913 CD2APQ9Y5K6 639 aa22.61■■□□□ 1.21
DNMT1-215ENST00000588913 ANKRD36CQ5JPF3 1778 aa22.61■■□□□ 1.21
DNMT1-215ENST00000588913 VAMP4O75379 141 aa22.61■■□□□ 1.21
DNMT1-215ENST00000588913 ARFGEF2Q9Y6D5 1785 aa22.6■■□□□ 1.21
DNMT1-215ENST00000588913 DBF4Q9UBU7 674 aaPredicted RBP22.6■■□□□ 1.21
DNMT1-215ENST00000588913 UBN2Q6ZU65 1347 aa22.6■■□□□ 1.21
DNMT1-215ENST00000588913 BRCA1P38398 1863 aaKnown RBP22.59■■□□□ 1.21
DNMT1-215ENST00000588913 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
DNMT1-215ENST00000588913 SLFN5Q08AF3 891 aa22.59■■□□□ 1.21
DNMT1-215ENST00000588913 ERVV-1B6SEH8 477 aa22.58■■□□□ 1.21
DNMT1-215ENST00000588913 CLEC4GQ6UXB4 293 aa22.58■■□□□ 1.21
DNMT1-215ENST00000588913 KIF6Q6ZMV9 814 aa22.58■■□□□ 1.21
DNMT1-215ENST00000588913 COL11A2P13942 1736 aaPredicted RBP22.58■■□□□ 1.21
DNMT1-215ENST00000588913 GPTP24298 496 aa22.58■■□□□ 1.2
DNMT1-215ENST00000588913 PRR5LQ6MZQ0 368 aa22.58■■□□□ 1.2
DNMT1-215ENST00000588913 G2E3Q7L622 706 aa22.58■■□□□ 1.2
DNMT1-215ENST00000588913 ZNF428Q96B54 188 aa22.58■■□□□ 1.2
DNMT1-215ENST00000588913 PPP4R2Q9NY27 417 aa22.58■■□□□ 1.2
DNMT1-215ENST00000588913 NIP7Q9Y221 180 aaKnown RBP eCLIP22.58■■□□□ 1.2
DNMT1-215ENST00000588913 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
DNMT1-215ENST00000588913 FAM177BA6PVY3 158 aa22.57■■□□□ 1.2
DNMT1-215ENST00000588913 A0A0G2JLW4 131 aa22.56■■□□□ 1.2
DNMT1-215ENST00000588913 GIGYF2Q6Y7W6 1299 aaKnown RBP22.56■■□□□ 1.2
DNMT1-215ENST00000588913 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
DNMT1-215ENST00000588913 SETDB2Q96T68 719 aa22.56■■□□□ 1.2
DNMT1-215ENST00000588913 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
DNMT1-215ENST00000588913 TNRC6CQ9HCJ0 1690 aaKnown RBP22.56■■□□□ 1.2
DNMT1-215ENST00000588913 DPEP1P16444 411 aa22.55■■□□□ 1.2
DNMT1-215ENST00000588913 KCNA3P22001 575 aa22.55■■□□□ 1.2
DNMT1-215ENST00000588913 CHRNA5P30532 468 aa22.55■■□□□ 1.2
DNMT1-215ENST00000588913 ZNF34Q8IZ26 560 aa22.55■■□□□ 1.2
DNMT1-215ENST00000588913 YBX3P16989 372 aaKnown RBP eCLIP22.55■■□□□ 1.29e-7■■□□□ 11.9
DNMT1-215ENST00000588913 HYPKQ9NX55 129 aa22.55■■□□□ 1.2
DNMT1-215ENST00000588913 ZNF652Q9Y2D9 606 aa22.55■■□□□ 1.2
DNMT1-215ENST00000588913 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
DNMT1-215ENST00000588913 E9PSI1 815 aa22.53■■□□□ 1.2
DNMT1-215ENST00000588913 RGL2O15211 777 aa22.53■■□□□ 1.2
DNMT1-215ENST00000588913 DLEC1Q9Y238 1755 aa22.53■■□□□ 1.2
DNMT1-215ENST00000588913 SUSD4Q5VX71 490 aa22.53■■□□□ 1.2
DNMT1-215ENST00000588913 ABCC12Q96J65 1359 aa22.52■■□□□ 1.2
DNMT1-215ENST00000588913 ANKRD13DQ6ZTN6 518 aa22.51■■□□□ 1.19
DNMT1-215ENST00000588913 NUTM1Q86Y26 1132 aa22.51■■□□□ 1.19
DNMT1-215ENST00000588913 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
DNMT1-215ENST00000588913 NBPF5PQ86XG9 351 aaPredicted RBP22.5■■□□□ 1.19
DNMT1-215ENST00000588913 CNBD1Q8NA66 436 aa22.5■■□□□ 1.19
DNMT1-215ENST00000588913 ADCY9O60503 1353 aa22.5■■□□□ 1.19
DNMT1-215ENST00000588913 SLC4A2P04920 1241 aa22.5■■□□□ 1.19
DNMT1-215ENST00000588913 SYNE4Q8N205 404 aa22.5■■□□□ 1.19
DNMT1-215ENST00000588913 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
DNMT1-215ENST00000588913 NTSR2O95665 410 aa22.49■■□□□ 1.19
DNMT1-215ENST00000588913 TGFB2P61812 414 aa22.49■■□□□ 1.19
DNMT1-215ENST00000588913 TCIRG1Q13488 830 aa22.49■■□□□ 1.19
DNMT1-215ENST00000588913 CACNA1FO60840 1977 aa22.49■■□□□ 1.19
DNMT1-215ENST00000588913 ERFEQ4G0M1 354 aa22.48■■□□□ 1.19
DNMT1-215ENST00000588913 NLRP10Q86W26 655 aa22.48■■□□□ 1.19
DNMT1-215ENST00000588913 CACNA1SQ13698 1873 aa22.47■■□□□ 1.19
DNMT1-215ENST00000588913 ISCA1Q9BUE6 129 aa22.47■■□□□ 1.19
DNMT1-215ENST00000588913 C3orf67Q6ZVT6 689 aa22.46■■□□□ 1.19
DNMT1-215ENST00000588913 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
DNMT1-215ENST00000588913 LAMB2P55268 1798 aa22.46■■□□□ 1.19
DNMT1-215ENST00000588913 BRIP1Q9BX63 1249 aa22.45■■□□□ 1.19
DNMT1-215ENST00000588913 DDX60Q8IY21 1712 aaKnown RBP22.45■■□□□ 1.18
DNMT1-215ENST00000588913 FLIIQ13045 1269 aa22.45■■□□□ 1.18
DNMT1-215ENST00000588913 GPR162Q16538 588 aa22.45■■□□□ 1.18
DNMT1-215ENST00000588913 RIC3Q7Z5B4 369 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms