RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.56■■□□□ 1.04
SCAMP4-211ENST00000588907 RFC4P35249 363 aa21.56■■□□□ 1.04
SCAMP4-211ENST00000588907 AIMP1Q12904 312 aaKnown RBP21.56■■□□□ 1.04
SCAMP4-211ENST00000588907 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
SCAMP4-211ENST00000588907 HSP90AB3PQ58FF7 597 aa21.55■■□□□ 1.04
SCAMP4-211ENST00000588907 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
SCAMP4-211ENST00000588907 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
SCAMP4-211ENST00000588907 SCN7AQ01118 1682 aa21.55■■□□□ 1.04
SCAMP4-211ENST00000588907 BCORQ6W2J9 1755 aa21.55■■□□□ 1.04
SCAMP4-211ENST00000588907 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
SCAMP4-211ENST00000588907 ZPR1O75312 459 aa21.54■■□□□ 1.04
SCAMP4-211ENST00000588907 TRIM27P14373 513 aa21.54■■□□□ 1.04
SCAMP4-211ENST00000588907 PDE3AQ14432 1141 aa21.54■■□□□ 1.04
SCAMP4-211ENST00000588907 CLEC4GQ6UXB4 293 aa21.54■■□□□ 1.04
SCAMP4-211ENST00000588907 ARXQ96QS3 562 aa21.54■■□□□ 1.04
SCAMP4-211ENST00000588907 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
SCAMP4-211ENST00000588907 ARFGEF2Q9Y6D5 1785 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 TUBGCP6Q96RT7 1819 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 PI4KAP2A4QPH2 592 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 NEXNQ0ZGT2 675 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 TTLL7Q6ZT98 887 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 PI4KAP1Q8N8J0 262 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 DNAAF4Q8WXU2 420 aa21.53■■□□□ 1.04
SCAMP4-211ENST00000588907 ADCY9O60503 1353 aa21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 PHF14O94880 888 aa21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 ARHGEF1Q92888 912 aaKnown RBP21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 MAP3K2Q9Y2U5 619 aa21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 SUPT16HQ9Y5B9 1047 aaKnown RBP21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 ATP10DQ9P241 1426 aa21.52■■□□□ 1.04
SCAMP4-211ENST00000588907 ABCC4O15439 1325 aa21.52■■□□□ 1.03
SCAMP4-211ENST00000588907 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.03
SCAMP4-211ENST00000588907 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
SCAMP4-211ENST00000588907 IBTKQ9P2D0 1353 aaPredicted RBP21.51■■□□□ 1.03
SCAMP4-211ENST00000588907 GIGYF2Q6Y7W6 1299 aaKnown RBP21.51■■□□□ 1.03
SCAMP4-211ENST00000588907 DZIP1LQ8IYY4 767 aaKnown RBP21.51■■□□□ 1.03
SCAMP4-211ENST00000588907 TBC1D2BQ9UPU7 963 aa21.51■■□□□ 1.03
SCAMP4-211ENST00000588907 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
SCAMP4-211ENST00000588907 CCT4P50991 539 aaKnown RBP21.5■■□□□ 1.03
SCAMP4-211ENST00000588907 METTL22Q9BUU2 404 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-211ENST00000588907 ZBTB3Q9H5J0 574 aa21.5■■□□□ 1.03
SCAMP4-211ENST00000588907 PNPLA7Q6ZV29 1317 aa21.5■■□□□ 1.03
SCAMP4-211ENST00000588907 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
SCAMP4-211ENST00000588907 LINS1Q8NG48 757 aa21.48■■□□□ 1.03
SCAMP4-211ENST00000588907 NUP98P52948 1817 aa21.48■■□□□ 1.03
SCAMP4-211ENST00000588907 TCIRG1Q13488 830 aa21.47■■□□□ 1.03
SCAMP4-211ENST00000588907 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
SCAMP4-211ENST00000588907 AMIGO3Q86WK7 504 aa21.47■■□□□ 1.03
SCAMP4-211ENST00000588907 CHMP4BQ9H444 224 aaKnown RBP21.47■■□□□ 1.03
SCAMP4-211ENST00000588907 F6X3S4 739 aa21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 PLIN1O60240 522 aa21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 ALDH1L1O75891 902 aa21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 TRIM28Q13263 835 aaKnown RBP21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 USPL1Q5W0Q7 1092 aa21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 INTS3Q68E01 1043 aaKnown RBP21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 COL23A1Q86Y22 540 aaPredicted RBP21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 SLC16A10Q8TF71 515 aa21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 SRCIN1Q9C0H9 1055 aa21.46■■□□□ 1.03
SCAMP4-211ENST00000588907 MSH5O43196 834 aa21.45■■□□□ 1.02
SCAMP4-211ENST00000588907 SOCS7O14512 581 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 PARP10Q53GL7 1025 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 BEND3Q5T5X7 828 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 NLGN1Q8N2Q7 840 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 CCDC191Q8NCU4 936 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 CLUAP1Q96AJ1 413 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 MYD88Q99836 296 aa21.44■■□□□ 1.02
SCAMP4-211ENST00000588907 GYS1P13807 737 aa21.43■■□□□ 1.02
SCAMP4-211ENST00000588907 HLFQ16534 295 aa21.43■■□□□ 1.02
SCAMP4-211ENST00000588907 ISCA1Q9BUE6 129 aa21.43■■□□□ 1.02
SCAMP4-211ENST00000588907 SRP68Q9UHB9 627 aaKnown RBP21.43■■□□□ 1.02
SCAMP4-211ENST00000588907 NEFLP07196 543 aa21.42■■□□□ 1.02
SCAMP4-211ENST00000588907 ZNF34Q8IZ26 560 aa21.42■■□□□ 1.02
SCAMP4-211ENST00000588907 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
SCAMP4-211ENST00000588907 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
SCAMP4-211ENST00000588907 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 NEURL1BA8MQ27 555 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 TMEM57Q8N5G2 664 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 PANK1Q8TE04 598 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 HDAC5Q9UQL6 1122 aa21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
SCAMP4-211ENST00000588907 CARMIL3Q8ND23 1372 aa21.4■■□□□ 1.02
SCAMP4-211ENST00000588907 RLBP1P12271 317 aa21.4■■□□□ 1.02
SCAMP4-211ENST00000588907 AAMPQ13685 434 aa21.4■■□□□ 1.02
SCAMP4-211ENST00000588907 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
SCAMP4-211ENST00000588907 COL24A1Q17RW2 1714 aa21.39■■□□□ 1.01
SCAMP4-211ENST00000588907 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
SCAMP4-211ENST00000588907 PPP1R42Q7Z4L9 355 aa21.39■■□□□ 1.01
SCAMP4-211ENST00000588907 NYXQ9GZU5 481 aa21.39■■□□□ 1.01
SCAMP4-211ENST00000588907 CASZ1Q86V15 1759 aa21.38■■□□□ 1.01
SCAMP4-211ENST00000588907 HSP90B1P14625 803 aaKnown RBP21.38■■□□□ 1.01
SCAMP4-211ENST00000588907 FKBP8Q14318 412 aa21.38■■□□□ 1.01
SCAMP4-211ENST00000588907 GCKRQ14397 625 aa21.38■■□□□ 1.01
SCAMP4-211ENST00000588907 NLRP10Q86W26 655 aa21.38■■□□□ 1.01
SCAMP4-211ENST00000588907 TNNQ9UQP3 1299 aa21.38■■□□□ 1.01
SCAMP4-211ENST00000588907 ATP5J2-PTCD1G3V325 749 aa21.37■■□□□ 1.01
SCAMP4-211ENST00000588907 GNAI3P08754 354 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms