RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PDZRN3Q9UPQ7 1066 aa13.71□□□□□ -0.21
TPM4-209ENST00000588483 ADCY9O60503 1353 aa13.71□□□□□ -0.22
TPM4-209ENST00000588483 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
TPM4-209ENST00000588483 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
TPM4-209ENST00000588483 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
TPM4-209ENST00000588483 GNAI1P63096 354 aa13.69□□□□□ -0.22
TPM4-209ENST00000588483 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
TPM4-209ENST00000588483 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
TPM4-209ENST00000588483 COL11A2P13942 1736 aaPredicted RBP13.69□□□□□ -0.22
TPM4-209ENST00000588483 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
TPM4-209ENST00000588483 CHRNA5P30532 468 aa13.68□□□□□ -0.22
TPM4-209ENST00000588483 HLFQ16534 295 aa13.68□□□□□ -0.22
TPM4-209ENST00000588483 CNBD1Q8NA66 436 aa13.68□□□□□ -0.22
TPM4-209ENST00000588483 ZNF784Q8NCA9 323 aaPredicted RBP13.68□□□□□ -0.22
TPM4-209ENST00000588483 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
TPM4-209ENST00000588483 RIC1Q4ADV7 1423 aa13.67□□□□□ -0.22
TPM4-209ENST00000588483 KLRG2A4D1S0 409 aaPredicted RBP13.67□□□□□ -0.22
TPM4-209ENST00000588483 PDE6BP35913 854 aa13.67□□□□□ -0.22
TPM4-209ENST00000588483 KRT24Q2M2I5 525 aa13.67□□□□□ -0.22
TPM4-209ENST00000588483 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
TPM4-209ENST00000588483 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
TPM4-209ENST00000588483 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
TPM4-209ENST00000588483 DDX21Q9NR30 783 aaKnown RBP eCLIP13.67□□□□□ -0.22
TPM4-209ENST00000588483 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
TPM4-209ENST00000588483 ARFGEF2Q9Y6D5 1785 aa13.67□□□□□ -0.22
TPM4-209ENST00000588483 MYL6BP14649 208 aa13.66□□□□□ -0.22
TPM4-209ENST00000588483 ST5P78524 1137 aa13.66□□□□□ -0.22
TPM4-209ENST00000588483 PROSER3Q2NL68 480 aa13.66□□□□□ -0.22
TPM4-209ENST00000588483 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
TPM4-209ENST00000588483 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
TPM4-209ENST00000588483 LAS1LQ9Y4W2 734 aaKnown RBP13.66□□□□□ -0.22
TPM4-209ENST00000588483 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
TPM4-209ENST00000588483 IL16Q14005 1332 aa13.65□□□□□ -0.22
TPM4-209ENST00000588483 H0YIN7 160 aa13.65□□□□□ -0.22
TPM4-209ENST00000588483 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
TPM4-209ENST00000588483 TPTE2Q6XPS3 522 aa13.65□□□□□ -0.22
TPM4-209ENST00000588483 NBPF5PQ86XG9 351 aaPredicted RBP13.65□□□□□ -0.22
TPM4-209ENST00000588483 C2CD5Q86YS7 1000 aa13.65□□□□□ -0.22
TPM4-209ENST00000588483 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
TPM4-209ENST00000588483 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
TPM4-209ENST00000588483 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
TPM4-209ENST00000588483 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
TPM4-209ENST00000588483 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
TPM4-209ENST00000588483 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
TPM4-209ENST00000588483 NYXQ9GZU5 481 aa13.64□□□□□ -0.23
TPM4-209ENST00000588483 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
TPM4-209ENST00000588483 SBF1O95248 1867 aa13.63□□□□□ -0.23
TPM4-209ENST00000588483 SRGNP10124 158 aa13.63□□□□□ -0.23
TPM4-209ENST00000588483 STYK1Q6J9G0 422 aa13.63□□□□□ -0.23
TPM4-209ENST00000588483 ZBTB3Q9H5J0 574 aa13.63□□□□□ -0.23
TPM4-209ENST00000588483 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
TPM4-209ENST00000588483 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
TPM4-209ENST00000588483 ANXA1P04083 346 aa13.62□□□□□ -0.23
TPM4-209ENST00000588483 PARP10Q53GL7 1025 aa13.62□□□□□ -0.23
TPM4-209ENST00000588483 COPS6Q7L5N1 327 aa13.62□□□□□ -0.23
TPM4-209ENST00000588483 XAGE3Q8WTP9 111 aa13.62□□□□□ -0.23
TPM4-209ENST00000588483 CHMP4AQ9BY43 222 aa13.62□□□□□ -0.23
TPM4-209ENST00000588483 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
TPM4-209ENST00000588483 RNF123Q5XPI4 1314 aa13.62□□□□□ -0.23
TPM4-209ENST00000588483 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 HSP90AB3PQ58FF7 597 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 CNKSR1Q969H4 720 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 MASTLQ96GX5 879 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
TPM4-209ENST00000588483 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
TPM4-209ENST00000588483 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
TPM4-209ENST00000588483 NPHP1O15259 732 aa13.6□□□□□ -0.23
TPM4-209ENST00000588483 NTSR2O95665 410 aa13.6□□□□□ -0.23
TPM4-209ENST00000588483 ARHGAP27Q6ZUM4 889 aa13.6□□□□□ -0.23
TPM4-209ENST00000588483 NECTIN2Q92692 538 aa13.6□□□□□ -0.23
TPM4-209ENST00000588483 NPR1P16066 1061 aa13.59□□□□□ -0.23
TPM4-209ENST00000588483 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
TPM4-209ENST00000588483 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
TPM4-209ENST00000588483 PPP1R42Q7Z4L9 355 aa13.59□□□□□ -0.23
TPM4-209ENST00000588483 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
TPM4-209ENST00000588483 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
TPM4-209ENST00000588483 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
TPM4-209ENST00000588483 GPTP24298 496 aa13.58□□□□□ -0.24
TPM4-209ENST00000588483 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
TPM4-209ENST00000588483 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.24
TPM4-209ENST00000588483 CACNA1SQ13698 1873 aa13.58□□□□□ -0.24
TPM4-209ENST00000588483 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.24
TPM4-209ENST00000588483 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
TPM4-209ENST00000588483 NFKBIEO00221 500 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 AIMP1Q12904 312 aaKnown RBP13.57□□□□□ -0.24
TPM4-209ENST00000588483 ERFEQ4G0M1 354 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
TPM4-209ENST00000588483 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 NLRP10Q86W26 655 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 NUTM1Q86Y26 1132 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 FAM9BQ8IZU0 186 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
TPM4-209ENST00000588483 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
TPM4-209ENST00000588483 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms