RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CHL1O00533 1208 aa25.54■■□□□ 1.68
TPM4-208ENST00000588410 APAF1O14727 1248 aa25.54■■□□□ 1.68
TPM4-208ENST00000588410 TTLL6Q8N841 843 aa25.54■■□□□ 1.68
TPM4-208ENST00000588410 KDM3BQ7LBC6 1761 aa25.54■■□□□ 1.68
TPM4-208ENST00000588410 ERVV-1B6SEH8 477 aa25.52■■□□□ 1.68
TPM4-208ENST00000588410 HLFQ16534 295 aa25.52■■□□□ 1.68
TPM4-208ENST00000588410 ZNF622Q969S3 477 aaKnown RBP eCLIP25.52■■□□□ 1.684e-10■■■□□ 14.6
TPM4-208ENST00000588410 TPTE2Q6XPS3 522 aa25.51■■□□□ 1.67
TPM4-208ENST00000588410 ZNF526Q8TF50 670 aaPredicted RBP25.51■■□□□ 1.67
TPM4-208ENST00000588410 GPBP1L1Q9HC44 474 aaPredicted RBP25.51■■□□□ 1.67
TPM4-208ENST00000588410 ADCY9O60503 1353 aa25.51■■□□□ 1.67
TPM4-208ENST00000588410 NRXN2Q9P2S2 1712 aa25.51■■□□□ 1.67
TPM4-208ENST00000588410 FAM177BA6PVY3 158 aa25.5■■□□□ 1.67
TPM4-208ENST00000588410 MAP3K15Q6ZN16 1313 aa25.5■■□□□ 1.67
TPM4-208ENST00000588410 TTLL7Q6ZT98 887 aa25.5■■□□□ 1.67
TPM4-208ENST00000588410 GTF2E1P29083 439 aaPredicted RBP25.49■■□□□ 1.67
TPM4-208ENST00000588410 CALD1Q05682 793 aaKnown RBP25.49■■□□□ 1.67
TPM4-208ENST00000588410 CCDC184Q52MB2 194 aa25.49■■□□□ 1.67
TPM4-208ENST00000588410 ZBTB3Q9H5J0 574 aa25.49■■□□□ 1.67
TPM4-208ENST00000588410 NECTIN2Q92692 538 aa25.48■■□□□ 1.67
TPM4-208ENST00000588410 CFAP44Q96MT7 982 aa25.48■■□□□ 1.67
TPM4-208ENST00000588410 LAMB4A4D0S4 1761 aa25.47■■□□□ 1.67
TPM4-208ENST00000588410 C9orf131Q5VYM1 1079 aa25.47■■□□□ 1.67
TPM4-208ENST00000588410 MRS2Q9HD23 443 aa25.47■■□□□ 1.67
TPM4-208ENST00000588410 AFDNP55196 1824 aaKnown RBP25.46■■□□□ 1.67
TPM4-208ENST00000588410 PDIA6Q15084 440 aa25.45■■□□□ 1.66
TPM4-208ENST00000588410 KRT24Q2M2I5 525 aa25.45■■□□□ 1.66
TPM4-208ENST00000588410 NYXQ9GZU5 481 aa25.45■■□□□ 1.66
TPM4-208ENST00000588410 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
TPM4-208ENST00000588410 STYK1Q6J9G0 422 aa25.44■■□□□ 1.66
TPM4-208ENST00000588410 CNKSR1Q969H4 720 aa25.44■■□□□ 1.66
TPM4-208ENST00000588410 MASTLQ96GX5 879 aa25.44■■□□□ 1.66
TPM4-208ENST00000588410 RNF181Q9P0P0 153 aa25.44■■□□□ 1.66
TPM4-208ENST00000588410 ANXA1P04083 346 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 SRGNP10124 158 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 C1QTNF8P60827 252 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 GNAI1P63096 354 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 PROSER3Q2NL68 480 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 MBIPQ9NS73 344 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 IFT57Q9NWB7 429 aa25.43■■□□□ 1.66
TPM4-208ENST00000588410 HOXB7P09629 217 aa25.42■■□□□ 1.66
TPM4-208ENST00000588410 GPTP24298 496 aa25.42■■□□□ 1.66
TPM4-208ENST00000588410 HDGFL1Q5TGJ6 251 aa25.42■■□□□ 1.66
TPM4-208ENST00000588410 GIGYF2Q6Y7W6 1299 aaKnown RBP25.42■■□□□ 1.66
TPM4-208ENST00000588410 ZNF219Q9P2Y4 722 aaPredicted RBP25.42■■□□□ 1.66
TPM4-208ENST00000588410 AIMP1Q12904 312 aaKnown RBP25.41■■□□□ 1.66
TPM4-208ENST00000588410 DDX21Q9NR30 783 aaKnown RBP eCLIP25.41■■□□□ 1.664e-7■■□□□ 12.4
TPM4-208ENST00000588410 C21orf2O43822 256 aa25.4■■□□□ 1.66
TPM4-208ENST00000588410 RASSF7Q02833 373 aa25.4■■□□□ 1.66
TPM4-208ENST00000588410 COPS6Q7L5N1 327 aa25.4■■□□□ 1.66
TPM4-208ENST00000588410 LRP10Q7Z4F1 713 aa25.4■■□□□ 1.66
TPM4-208ENST00000588410 XAGE3Q8WTP9 111 aa25.4■■□□□ 1.66
TPM4-208ENST00000588410 BRCA1P38398 1863 aaKnown RBP25.4■■□□□ 1.66
TPM4-208ENST00000588410 ZNF853P0CG23 659 aa25.39■■□□□ 1.66
TPM4-208ENST00000588410 NPR1P16066 1061 aa25.39■■□□□ 1.66
TPM4-208ENST00000588410 DUSP27Q5VZP5 1158 aa25.39■■□□□ 1.66
TPM4-208ENST00000588410 ZNF34Q8IZ26 560 aa25.39■■□□□ 1.66
TPM4-208ENST00000588410 PRPF40BQ6NWY9 871 aaKnown RBP25.38■■□□□ 1.65
TPM4-208ENST00000588410 NUTM1Q86Y26 1132 aa25.38■■□□□ 1.65
TPM4-208ENST00000588410 CHPF2Q9P2E5 772 aa25.38■■□□□ 1.65
TPM4-208ENST00000588410 KLRG2A4D1S0 409 aaPredicted RBP25.37■■□□□ 1.65
TPM4-208ENST00000588410 LMNB1P20700 586 aa25.37■■□□□ 1.65
TPM4-208ENST00000588410 PARP10Q53GL7 1025 aa25.37■■□□□ 1.65
TPM4-208ENST00000588410 SUSD4Q5VX71 490 aa25.37■■□□□ 1.65
TPM4-208ENST00000588410 PPP1R42Q7Z4L9 355 aa25.37■■□□□ 1.65
TPM4-208ENST00000588410 DBF4Q9UBU7 674 aaPredicted RBP25.37■■□□□ 1.65
TPM4-208ENST00000588410 UBN2Q6ZU65 1347 aa25.37■■□□□ 1.65
TPM4-208ENST00000588410 ARFGEF1Q9Y6D6 1849 aa25.36■■□□□ 1.65
TPM4-208ENST00000588410 ERFEQ4G0M1 354 aa25.36■■□□□ 1.65
TPM4-208ENST00000588410 HSP90AB3PQ58FF7 597 aa25.36■■□□□ 1.65
TPM4-208ENST00000588410 SOGA3Q5TF21 947 aa25.36■■□□□ 1.65
TPM4-208ENST00000588410 IBTKQ9P2D0 1353 aaPredicted RBP25.34■■□□□ 1.65
TPM4-208ENST00000588410 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
TPM4-208ENST00000588410 NFKBIEO00221 500 aa25.34■■□□□ 1.65
TPM4-208ENST00000588410 ELL2O00472 640 aaPredicted RBP25.33■■□□□ 1.65
TPM4-208ENST00000588410 ALDH1B1P30837 517 aa25.33■■□□□ 1.65
TPM4-208ENST00000588410 UTP14AQ9BVJ6 771 aaKnown RBP25.33■■□□□ 1.65
TPM4-208ENST00000588410 HYPKQ9NX55 129 aa25.33■■□□□ 1.65
TPM4-208ENST00000588410 ABCC12Q96J65 1359 aa25.32■■□□□ 1.64
TPM4-208ENST00000588410 ANKRD31Q8N7Z5 1873 aa25.32■■□□□ 1.64
TPM4-208ENST00000588410 NTSR2O95665 410 aa25.32■■□□□ 1.64
TPM4-208ENST00000588410 CCDC27Q2M243 656 aa25.32■■□□□ 1.64
TPM4-208ENST00000588410 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
TPM4-208ENST00000588410 DLEC1Q9Y238 1755 aa25.31■■□□□ 1.64
TPM4-208ENST00000588410 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
TPM4-208ENST00000588410 CHMP4AQ9BY43 222 aa25.31■■□□□ 1.64
TPM4-208ENST00000588410 TAOK3Q9H2K8 898 aa25.31■■□□□ 1.64
TPM4-208ENST00000588410 ZC3H4Q9UPT8 1303 aaKnown RBP25.31■■□□□ 1.64
TPM4-208ENST00000588410 TCIRG1Q13488 830 aa25.3■■□□□ 1.64
TPM4-208ENST00000588410 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
TPM4-208ENST00000588410 PLBD2Q8NHP8 589 aa25.3■■□□□ 1.64
TPM4-208ENST00000588410 KIF3CO14782 793 aa25.29■■□□□ 1.64
TPM4-208ENST00000588410 CRY2Q49AN0 593 aa25.29■■□□□ 1.64
TPM4-208ENST00000588410 CCDC93Q567U6 631 aa25.29■■□□□ 1.64
TPM4-208ENST00000588410 ANKRD13DQ6ZTN6 518 aa25.29■■□□□ 1.64
TPM4-208ENST00000588410 PRELPP51888 382 aa25.28■■□□□ 1.64
TPM4-208ENST00000588410 C8orf58Q8NAV2 365 aa25.28■■□□□ 1.64
TPM4-208ENST00000588410 NMRK2Q9NPI5 230 aa25.28■■□□□ 1.64
TPM4-208ENST00000588410 COL11A2P13942 1736 aaPredicted RBP25.28■■□□□ 1.64
TPM4-208ENST00000588410 NCBP3Q53F19 620 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms