RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
CLPTM1-208ENST00000588274 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
CLPTM1-208ENST00000588274 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
CLPTM1-208ENST00000588274 TAOK3Q9H2K8 898 aa18.59■□□□□ 0.57
CLPTM1-208ENST00000588274 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
CLPTM1-208ENST00000588274 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
CLPTM1-208ENST00000588274 HSPA1AP0DMV8 641 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-208ENST00000588274 HSPA1BP0DMV9 641 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-208ENST00000588274 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-208ENST00000588274 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
CLPTM1-208ENST00000588274 KLRG2A4D1S0 409 aaPredicted RBP18.57■□□□□ 0.56
CLPTM1-208ENST00000588274 SETDB2Q96T68 719 aa18.57■□□□□ 0.56
CLPTM1-208ENST00000588274 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
CLPTM1-208ENST00000588274 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
CLPTM1-208ENST00000588274 DDNO94850 711 aaPredicted RBP18.56■□□□□ 0.56
CLPTM1-208ENST00000588274 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
CLPTM1-208ENST00000588274 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
CLPTM1-208ENST00000588274 CNKSR1Q969H4 720 aa18.56■□□□□ 0.56
CLPTM1-208ENST00000588274 MASTLQ96GX5 879 aa18.55■□□□□ 0.56
CLPTM1-208ENST00000588274 L3MBTL3Q96JM7 780 aaPredicted RBP18.55■□□□□ 0.56
CLPTM1-208ENST00000588274 PASKQ96RG2 1323 aa18.54■□□□□ 0.56
CLPTM1-208ENST00000588274 SCN4AP35499 1836 aa18.54■□□□□ 0.56
CLPTM1-208ENST00000588274 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
CLPTM1-208ENST00000588274 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
CLPTM1-208ENST00000588274 CLEC4GQ6UXB4 293 aa18.54■□□□□ 0.56
CLPTM1-208ENST00000588274 MCM10Q7L590 875 aa18.54■□□□□ 0.56
CLPTM1-208ENST00000588274 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
CLPTM1-208ENST00000588274 RGL2O15211 777 aa18.53■□□□□ 0.56
CLPTM1-208ENST00000588274 ST5P78524 1137 aa18.53■□□□□ 0.56
CLPTM1-208ENST00000588274 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
CLPTM1-208ENST00000588274 CREBZFQ9NS37 354 aa18.53■□□□□ 0.56
CLPTM1-208ENST00000588274 COL4A5P29400 1685 aa18.53■□□□□ 0.56
CLPTM1-208ENST00000588274 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
CLPTM1-208ENST00000588274 OLFM4Q6UX06 510 aa18.52■□□□□ 0.56
CLPTM1-208ENST00000588274 TNS4Q8IZW8 715 aa18.52■□□□□ 0.56
CLPTM1-208ENST00000588274 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
CLPTM1-208ENST00000588274 DCTN1Q14203 1278 aa18.51■□□□□ 0.55
CLPTM1-208ENST00000588274 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
CLPTM1-208ENST00000588274 ABCC12Q96J65 1359 aa18.51■□□□□ 0.55
CLPTM1-208ENST00000588274 PPP2R1AP30153 589 aa18.5■□□□□ 0.55
CLPTM1-208ENST00000588274 NBPF5PQ86XG9 351 aaPredicted RBP18.5■□□□□ 0.55
CLPTM1-208ENST00000588274 CNTNAP1P78357 1384 aa18.5■□□□□ 0.55
CLPTM1-208ENST00000588274 NPR1P16066 1061 aa18.49■□□□□ 0.55
CLPTM1-208ENST00000588274 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
CLPTM1-208ENST00000588274 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
CLPTM1-208ENST00000588274 FKBP4Q02790 459 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLPTM1-208ENST00000588274 HLFQ16534 295 aa18.48■□□□□ 0.55
CLPTM1-208ENST00000588274 MKRN1Q9UHC7 482 aaKnown RBP18.48■□□□□ 0.55
CLPTM1-208ENST00000588274 LTBP1Q14766 1721 aa18.48■□□□□ 0.55
CLPTM1-208ENST00000588274 RIC1Q4ADV7 1423 aa18.48■□□□□ 0.55
CLPTM1-208ENST00000588274 DLG5Q8TDM6 1919 aa18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 CAPN15O75808 1086 aa18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 ITGBL1O95965 494 aaPredicted RBP18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 CRY2Q49AN0 593 aa18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 LDHDQ86WU2 507 aa18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 ZNF277Q9NRM2 450 aaPredicted RBP18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 NIP7Q9Y221 180 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
CLPTM1-208ENST00000588274 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
CLPTM1-208ENST00000588274 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLPTM1-208ENST00000588274 SLC51AQ86UW1 340 aa18.46■□□□□ 0.55
CLPTM1-208ENST00000588274 IQCA1LA6NCM1 817 aa18.45■□□□□ 0.54
CLPTM1-208ENST00000588274 NPHP1O15259 732 aa18.45■□□□□ 0.54
CLPTM1-208ENST00000588274 HTATSF1O43719 755 aaKnown RBP18.45■□□□□ 0.54
CLPTM1-208ENST00000588274 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
CLPTM1-208ENST00000588274 NUP98P52948 1817 aa18.44■□□□□ 0.54
CLPTM1-208ENST00000588274 FZD9O00144 591 aa18.44■□□□□ 0.54
CLPTM1-208ENST00000588274 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
CLPTM1-208ENST00000588274 THSD7BQ9C0I4 1608 aa18.44■□□□□ 0.54
CLPTM1-208ENST00000588274 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
CLPTM1-208ENST00000588274 FOXN1O15353 648 aa18.43■□□□□ 0.54
CLPTM1-208ENST00000588274 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-208ENST00000588274 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
CLPTM1-208ENST00000588274 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
CLPTM1-208ENST00000588274 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
CLPTM1-208ENST00000588274 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
CLPTM1-208ENST00000588274 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
CLPTM1-208ENST00000588274 IARSP41252 1262 aaKnown RBP18.41■□□□□ 0.54
CLPTM1-208ENST00000588274 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CLPTM1-208ENST00000588274 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
CLPTM1-208ENST00000588274 PLEKHF1Q96S99 279 aa18.41■□□□□ 0.54
CLPTM1-208ENST00000588274 PSMD1Q99460 953 aa18.41■□□□□ 0.54
CLPTM1-208ENST00000588274 VEGFBP49765 207 aa18.4■□□□□ 0.54
CLPTM1-208ENST00000588274 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
CLPTM1-208ENST00000588274 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
CLPTM1-208ENST00000588274 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
CLPTM1-208ENST00000588274 HOXA10P31260 410 aaPredicted RBP18.39■□□□□ 0.53
CLPTM1-208ENST00000588274 EPHX2P34913 555 aa18.39■□□□□ 0.53
CLPTM1-208ENST00000588274 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
CLPTM1-208ENST00000588274 LRP10Q7Z4F1 713 aa18.39■□□□□ 0.53
CLPTM1-208ENST00000588274 NUTM1Q86Y26 1132 aa18.39■□□□□ 0.53
CLPTM1-208ENST00000588274 TMEM88BA6NKF7 163 aa18.38■□□□□ 0.53
CLPTM1-208ENST00000588274 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
CLPTM1-208ENST00000588274 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
CLPTM1-208ENST00000588274 GPC2Q8N158 579 aa18.38■□□□□ 0.53
CLPTM1-208ENST00000588274 SYNE4Q8N205 404 aa18.38■□□□□ 0.53
CLPTM1-208ENST00000588274 RASSF10A6NK89 507 aa18.37■□□□□ 0.53
CLPTM1-208ENST00000588274 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
CLPTM1-208ENST00000588274 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms