RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
SDHDP1-201ENST00000588055 ERVV-1B6SEH8 477 aa15.25■□□□□ 0.03
SDHDP1-201ENST00000588055 ANXA1P04083 346 aa15.25■□□□□ 0.03
SDHDP1-201ENST00000588055 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
SDHDP1-201ENST00000588055 AIMP1Q12904 312 aaKnown RBP15.25■□□□□ 0.03
SDHDP1-201ENST00000588055 PROSER3Q2NL68 480 aa15.25■□□□□ 0.03
SDHDP1-201ENST00000588055 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 PDIA6Q15084 440 aa15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 BICDL1Q6ZP65 573 aa15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 COPS6Q7L5N1 327 aa15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 ZBTB3Q9H5J0 574 aa15.24■□□□□ 0.03
SDHDP1-201ENST00000588055 NUP98P52948 1817 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 NFIXQ14938 502 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 TTLL7Q6ZT98 887 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 FHDC1Q9C0D6 1143 aaPredicted RBP15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 CACNA1FO60840 1977 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 ANKRD36CQ5JPF3 1778 aa15.23■□□□□ 0.03
SDHDP1-201ENST00000588055 ARFGEF2Q9Y6D5 1785 aa15.22■□□□□ 0.03
SDHDP1-201ENST00000588055 TBC1D9BQ66K14 1250 aa15.22■□□□□ 0.03
SDHDP1-201ENST00000588055 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
SDHDP1-201ENST00000588055 BCL2L12Q9HB09 334 aa15.22■□□□□ 0.03
SDHDP1-201ENST00000588055 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
SDHDP1-201ENST00000588055 C10orf71Q711Q0 1435 aa15.21■□□□□ 0.03
SDHDP1-201ENST00000588055 POLRMTO00411 1230 aaKnown RBP15.21■□□□□ 0.03
SDHDP1-201ENST00000588055 DDR1Q08345 913 aa15.21■□□□□ 0.03
SDHDP1-201ENST00000588055 LRP10Q7Z4F1 713 aa15.21■□□□□ 0.03
SDHDP1-201ENST00000588055 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
SDHDP1-201ENST00000588055 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
SDHDP1-201ENST00000588055 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 VAMP4O75379 141 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 TM4SF1P30408 202 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 ST5P78524 1137 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 GIGYF2Q6Y7W6 1299 aaKnown RBP15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 RIC3Q7Z5B4 369 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 NBPF5PQ86XG9 351 aaPredicted RBP15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 CNBD1Q8NA66 436 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
SDHDP1-201ENST00000588055 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 SERPINB2P05120 415 aa15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 HLFQ16534 295 aa15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 NYXQ9GZU5 481 aa15.19■□□□□ 0.02
SDHDP1-201ENST00000588055 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
SDHDP1-201ENST00000588055 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
SDHDP1-201ENST00000588055 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
SDHDP1-201ENST00000588055 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
SDHDP1-201ENST00000588055 GPTP24298 496 aa15.17■□□□□ 0.02
SDHDP1-201ENST00000588055 FLIIQ13045 1269 aa15.17■□□□□ 0.02
SDHDP1-201ENST00000588055 FKBP5Q13451 457 aaPredicted RBP15.17■□□□□ 0.02
SDHDP1-201ENST00000588055 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
SDHDP1-201ENST00000588055 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
SDHDP1-201ENST00000588055 SYT17Q9BSW7 474 aa15.17■□□□□ 0.02
SDHDP1-201ENST00000588055 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
SDHDP1-201ENST00000588055 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
SDHDP1-201ENST00000588055 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
SDHDP1-201ENST00000588055 SMC4Q9NTJ3 1288 aa15.16■□□□□ 0.02
SDHDP1-201ENST00000588055 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
SDHDP1-201ENST00000588055 TCIRG1Q13488 830 aa15.15■□□□□ 0.02
SDHDP1-201ENST00000588055 ALDH1L2Q3SY69 923 aa15.15■□□□□ 0.02
SDHDP1-201ENST00000588055 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
SDHDP1-201ENST00000588055 TGFB2P61812 414 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 ZNF34Q8IZ26 560 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 UBN2Q6ZU65 1347 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
SDHDP1-201ENST00000588055 PI4KAP2A4QPH2 592 aa15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 PDE6BP35913 854 aa15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 PI4KAP1Q8N8J0 262 aa15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 NLGN2Q8NFZ4 835 aa15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 YTHDC1Q96MU7 727 aaKnown RBP15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 MYD88Q99836 296 aa15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 N4BP2Q86UW6 1770 aaPredicted RBP15.13■□□□□ 0.01
SDHDP1-201ENST00000588055 G2E3Q7L622 706 aa15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 BRIP1Q9BX63 1249 aa15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 PTPRCP08575 1304 aa15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 KIF16BQ96L93 1317 aa15.12■□□□□ 0.01
SDHDP1-201ENST00000588055 ADCY9O60503 1353 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 DLEC1Q9Y238 1755 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 ATP5J2-PTCD1G3V325 749 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 HSP90B1P14625 803 aaKnown RBP15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 NLRP10Q86W26 655 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 DNAAF4Q8WXU2 420 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
SDHDP1-201ENST00000588055 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms