RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PRELPP51888 382 aa24.85■■□□□ 1.57
TRIM47-205ENST00000587774 ST5P78524 1137 aa24.84■■□□□ 1.57
TRIM47-205ENST00000587774 RALBP1Q15311 655 aa24.84■■□□□ 1.57
TRIM47-205ENST00000587774 ZNF622Q969S3 477 aaKnown RBP eCLIP24.84■■□□□ 1.57
TRIM47-205ENST00000587774 PDZRN3Q9UPQ7 1066 aa24.84■■□□□ 1.57
TRIM47-205ENST00000587774 ZNF652Q9Y2D9 606 aa24.84■■□□□ 1.57
TRIM47-205ENST00000587774 KDM2BQ8NHM5 1336 aa24.84■■□□□ 1.57
TRIM47-205ENST00000587774 NFKBIEO00221 500 aa24.83■■□□□ 1.57
TRIM47-205ENST00000587774 TOMM70O94826 608 aa24.83■■□□□ 1.57
TRIM47-205ENST00000587774 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
TRIM47-205ENST00000587774 PNISRQ8TF01 805 aaKnown RBP24.83■■□□□ 1.57
TRIM47-205ENST00000587774 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
TRIM47-205ENST00000587774 ZC3H4Q9UPT8 1303 aaKnown RBP24.83■■□□□ 1.56
TRIM47-205ENST00000587774 LAMB2P55268 1798 aa24.82■■□□□ 1.56
TRIM47-205ENST00000587774 LMNB1P20700 586 aa24.82■■□□□ 1.56
TRIM47-205ENST00000587774 DDX10Q13206 875 aaKnown RBP24.81■■□□□ 1.56
TRIM47-205ENST00000587774 EIF4A1P60842 406 aaKnown RBP24.8■■□□□ 1.56
TRIM47-205ENST00000587774 NBPF5PQ86XG9 351 aaPredicted RBP24.8■■□□□ 1.56
TRIM47-205ENST00000587774 RGL2O15211 777 aa24.79■■□□□ 1.56
TRIM47-205ENST00000587774 C21orf2O43822 256 aa24.79■■□□□ 1.56
TRIM47-205ENST00000587774 ZNF219Q9P2Y4 722 aaPredicted RBP24.79■■□□□ 1.56
TRIM47-205ENST00000587774 MYBBP1AQ9BQG0 1328 aaKnown RBP24.79■■□□□ 1.56
TRIM47-205ENST00000587774 SRGNP10124 158 aa24.78■■□□□ 1.56
TRIM47-205ENST00000587774 NIP7Q9Y221 180 aaKnown RBP eCLIP24.78■■□□□ 1.56
TRIM47-205ENST00000587774 HLFQ16534 295 aa24.77■■□□□ 1.56
TRIM47-205ENST00000587774 STYK1Q6J9G0 422 aa24.77■■□□□ 1.56
TRIM47-205ENST00000587774 PRPF40BQ6NWY9 871 aaKnown RBP24.76■■□□□ 1.55
TRIM47-205ENST00000587774 MASTLQ96GX5 879 aa24.76■■□□□ 1.55
TRIM47-205ENST00000587774 PCNTO95613 3336 aa24.75■■□□□ 1.55
TRIM47-205ENST00000587774 C16orf71Q8IYS4 520 aaPredicted RBP24.75■■□□□ 1.55
TRIM47-205ENST00000587774 NGEFQ8N5V2 710 aa24.75■■□□□ 1.55
TRIM47-205ENST00000587774 RBM46Q8TBY0 533 aaKnown RBP24.75■■□□□ 1.55
TRIM47-205ENST00000587774 CNKSR1Q969H4 720 aa24.75■■□□□ 1.55
TRIM47-205ENST00000587774 RRAGCQ9HB90 399 aa24.75■■□□□ 1.55
TRIM47-205ENST00000587774 SCN4AP35499 1836 aa24.75■■□□□ 1.55
TRIM47-205ENST00000587774 FAM177BA6PVY3 158 aa24.74■■□□□ 1.55
TRIM47-205ENST00000587774 RIPK4P57078 832 aa24.74■■□□□ 1.55
TRIM47-205ENST00000587774 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
TRIM47-205ENST00000587774 RRP7AQ9Y3A4 280 aaKnown RBP24.73■■□□□ 1.55
TRIM47-205ENST00000587774 ABCC12Q96J65 1359 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 MAP3K15Q6ZN16 1313 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 LTBP3Q9NS15 1303 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 GLTPD2A6NH11 291 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 MYL6BP14649 208 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 TMPOP42166 694 aaKnown RBP24.72■■□□□ 1.55
TRIM47-205ENST00000587774 TPTE2Q6XPS3 522 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 TTLL7Q6ZT98 887 aa24.72■■□□□ 1.55
TRIM47-205ENST00000587774 APLP1P51693 650 aa24.71■■□□□ 1.55
TRIM47-205ENST00000587774 TAOK3Q9H2K8 898 aa24.71■■□□□ 1.55
TRIM47-205ENST00000587774 KLRG2A4D1S0 409 aaPredicted RBP24.7■■□□□ 1.54
TRIM47-205ENST00000587774 ERVV-1B6SEH8 477 aa24.7■■□□□ 1.54
TRIM47-205ENST00000587774 KIF6Q6ZMV9 814 aa24.7■■□□□ 1.54
TRIM47-205ENST00000587774 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.54
TRIM47-205ENST00000587774 TAF1P21675 1872 aa24.7■■□□□ 1.54
TRIM47-205ENST00000587774 ERBB4Q15303 1308 aa24.69■■□□□ 1.54
TRIM47-205ENST00000587774 NPR1P16066 1061 aa24.69■■□□□ 1.54
TRIM47-205ENST00000587774 LMOD3Q0VAK6 560 aa24.69■■□□□ 1.54
TRIM47-205ENST00000587774 ERFEQ4G0M1 354 aa24.68■■□□□ 1.54
TRIM47-205ENST00000587774 SOGA3Q5TF21 947 aa24.68■■□□□ 1.54
TRIM47-205ENST00000587774 ZBTB3Q9H5J0 574 aa24.68■■□□□ 1.54
TRIM47-205ENST00000587774 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
TRIM47-205ENST00000587774 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
TRIM47-205ENST00000587774 UBN2Q6ZU65 1347 aa24.67■■□□□ 1.54
TRIM47-205ENST00000587774 DDX60Q8IY21 1712 aaKnown RBP24.67■■□□□ 1.54
TRIM47-205ENST00000587774 FSTL1Q12841 308 aa24.67■■□□□ 1.54
TRIM47-205ENST00000587774 NUTM1Q86Y26 1132 aa24.66■■□□□ 1.54
TRIM47-205ENST00000587774 C7orf43Q8WVR3 580 aa24.66■■□□□ 1.54
TRIM47-205ENST00000587774 VEGFAP15692 232 aaPredicted RBP24.65■■□□□ 1.54
TRIM47-205ENST00000587774 GPTP24298 496 aa24.65■■□□□ 1.54
TRIM47-205ENST00000587774 GTF2E1P29083 439 aaPredicted RBP24.65■■□□□ 1.54
TRIM47-205ENST00000587774 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
TRIM47-205ENST00000587774 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
TRIM47-205ENST00000587774 NYXQ9GZU5 481 aa24.65■■□□□ 1.54
TRIM47-205ENST00000587774 BABAM1Q9NWV8 329 aa24.65■■□□□ 1.54
TRIM47-205ENST00000587774 CCDC93Q567U6 631 aa24.64■■□□□ 1.54
TRIM47-205ENST00000587774 LRP10Q7Z4F1 713 aa24.64■■□□□ 1.54
TRIM47-205ENST00000587774 SNED1Q8TER0 1413 aa24.63■■□□□ 1.53
TRIM47-205ENST00000587774 EIF2S2P20042 333 aaKnown RBP24.63■■□□□ 1.53
TRIM47-205ENST00000587774 PROSER3Q2NL68 480 aa24.63■■□□□ 1.53
TRIM47-205ENST00000587774 OLFM4Q6UX06 510 aa24.63■■□□□ 1.53
TRIM47-205ENST00000587774 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
TRIM47-205ENST00000587774 PDIA6Q15084 440 aa24.62■■□□□ 1.53
TRIM47-205ENST00000587774 CRY2Q49AN0 593 aa24.62■■□□□ 1.53
TRIM47-205ENST00000587774 SMC1BQ8NDV3 1235 aa24.62■■□□□ 1.53
TRIM47-205ENST00000587774 POTECB2RU33 542 aa24.61■■□□□ 1.53
TRIM47-205ENST00000587774 ANXA1P04083 346 aa24.61■■□□□ 1.53
TRIM47-205ENST00000587774 DPY19L2Q6NUT2 758 aa24.61■■□□□ 1.53
TRIM47-205ENST00000587774 GIGYF2Q6Y7W6 1299 aaKnown RBP24.61■■□□□ 1.53
TRIM47-205ENST00000587774 ZNF34Q8IZ26 560 aa24.61■■□□□ 1.53
TRIM47-205ENST00000587774 PRKRIP1Q9H875 184 aaPredicted RBP24.61■■□□□ 1.53
TRIM47-205ENST00000587774 TRIM35Q9UPQ4 493 aa24.61■■□□□ 1.53
TRIM47-205ENST00000587774 HTRA3P83110 453 aa24.6■■□□□ 1.53
TRIM47-205ENST00000587774 SUSD4Q5VX71 490 aa24.6■■□□□ 1.53
TRIM47-205ENST00000587774 DNAJC5GQ8N7S2 189 aa24.6■■□□□ 1.53
TRIM47-205ENST00000587774 ADAMTS8Q9UP79 889 aa24.6■■□□□ 1.53
TRIM47-205ENST00000587774 NTSR2O95665 410 aa24.59■■□□□ 1.53
TRIM47-205ENST00000587774 ALDH1B1P30837 517 aa24.59■■□□□ 1.53
TRIM47-205ENST00000587774 FKBP4Q02790 459 aaKnown RBP eCLIP24.59■■□□□ 1.53
TRIM47-205ENST00000587774 KRT24Q2M2I5 525 aa24.59■■□□□ 1.53
TRIM47-205ENST00000587774 ADAMTSL1Q8N6G6 1762 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms