RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
PRKCSH-205ENST00000587327 USP48Q86UV5 1035 aa20.34■□□□□ 0.85
PRKCSH-205ENST00000587327 TTC14Q96N46 770 aa20.34■□□□□ 0.85
PRKCSH-205ENST00000587327 KCNQ3O43525 872 aa20.34■□□□□ 0.85
PRKCSH-205ENST00000587327 TSPY26PQ9H489 355 aa20.34■□□□□ 0.85
PRKCSH-205ENST00000587327 GADD45BO75293 160 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 MCM5P33992 734 aa20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 FOXD4L6Q3SYB3 417 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 FOXD4L3Q6VB84 417 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 RNF214Q8ND24 703 aa20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 GDPD2Q9HCC8 539 aa20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 ZKSCAN5Q9Y2L8 839 aa20.33■□□□□ 0.85
PRKCSH-205ENST00000587327 LMTK3Q96Q04 1460 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 ERBB3P21860 1342 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 ATF3P18847 181 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 RPAP1Q9BWH6 1393 aaPredicted RBP20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 PHF14O94880 888 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 TERF1P54274 439 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 TEFQ10587 303 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
PRKCSH-205ENST00000587327 TTC41PQ6P2S7 1318 aa20.31■□□□□ 0.84
PRKCSH-205ENST00000587327 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
PRKCSH-205ENST00000587327 TMEM87AQ8NBN3 555 aa20.31■□□□□ 0.84
PRKCSH-205ENST00000587327 CCDC39Q9UFE4 941 aa20.31■□□□□ 0.84
PRKCSH-205ENST00000587327 LIMCH1Q9UPQ0 1083 aa20.31■□□□□ 0.84
PRKCSH-205ENST00000587327 AK2P54819 239 aa20.31■□□□□ 0.84
PRKCSH-205ENST00000587327 BTBD11A6QL63 1104 aa20.3■□□□□ 0.84
PRKCSH-205ENST00000587327 GLRX3O76003 335 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-205ENST00000587327 ZC3H6P61129 1189 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-205ENST00000587327 C1orf141Q5JVX7 400 aa20.3■□□□□ 0.84
PRKCSH-205ENST00000587327 ADCY9O60503 1353 aa20.3■□□□□ 0.84
PRKCSH-205ENST00000587327 CRYBG1Q9Y4K1 1723 aa20.3■□□□□ 0.84
PRKCSH-205ENST00000587327 MTX1Q13505 466 aa20.29■□□□□ 0.84
PRKCSH-205ENST00000587327 RUFY3Q7L099 469 aa20.29■□□□□ 0.84
PRKCSH-205ENST00000587327 COL18A1P39060 1754 aa20.29■□□□□ 0.84
PRKCSH-205ENST00000587327 SPG7Q9UQ90 795 aa20.29■□□□□ 0.84
PRKCSH-205ENST00000587327 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-205ENST00000587327 ZSCAN22P10073 491 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-205ENST00000587327 ANXA1P04083 346 aa20.28■□□□□ 0.84
PRKCSH-205ENST00000587327 OS9Q13438 667 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-205ENST00000587327 STX6O43752 255 aa20.27■□□□□ 0.84
PRKCSH-205ENST00000587327 SYT1P21579 422 aa20.27■□□□□ 0.84
PRKCSH-205ENST00000587327 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.84
PRKCSH-205ENST00000587327 DBF4Q9UBU7 674 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-205ENST00000587327 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.83
PRKCSH-205ENST00000587327 RUFY2Q8WXA3 655 aa20.27■□□□□ 0.83
PRKCSH-205ENST00000587327 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.83
PRKCSH-205ENST00000587327 FAM184AQ8NB25 1140 aa20.26■□□□□ 0.83
PRKCSH-205ENST00000587327 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
PRKCSH-205ENST00000587327 CNPY2Q9Y2B0 182 aa20.26■□□□□ 0.83
PRKCSH-205ENST00000587327 XIRP1Q702N8 1843 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-205ENST00000587327 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 HSPA2P54652 639 aa20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 TCHHQ07283 1943 aa20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 CSPP1Q1MSJ5 1256 aa20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 SMC3Q9UQE7 1217 aa20.25■□□□□ 0.83
PRKCSH-205ENST00000587327 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 CCDC183Q5T5S1 534 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 NPHP3Q7Z494 1330 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 CPA1P15085 419 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 UBE2HP62256 183 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 ATP6V1DQ9Y5K8 247 aa20.24■□□□□ 0.83
PRKCSH-205ENST00000587327 MEGF6O75095 1541 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 ABCC6O95255 1503 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 F13A1P00488 732 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 PTH1RQ03431 593 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 GLIPR1L2Q4G1C9 344 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 KCNB2Q92953 911 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
PRKCSH-205ENST00000587327 LETM1O95202 739 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 TM6SF1Q9BZW5 370 aa20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 KDM6AO15550 1401 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 IFIT2P09913 472 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 ZSWIM6Q9HCJ5 1215 aa20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 HDAC5Q9UQL6 1122 aa20.22■□□□□ 0.83
PRKCSH-205ENST00000587327 LARGE1O95461 756 aa20.21■□□□□ 0.83
PRKCSH-205ENST00000587327 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
PRKCSH-205ENST00000587327 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
PRKCSH-205ENST00000587327 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
PRKCSH-205ENST00000587327 PTMAP06454 111 aaKnown RBP20.21■□□□□ 0.83
PRKCSH-205ENST00000587327 PRPF40BQ6NWY9 871 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms