RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
PRKCSH-204ENST00000587290 BRIP1Q9BX63 1249 aa20.23■□□□□ 0.83
PRKCSH-204ENST00000587290 PDE6BP35913 854 aa20.22■□□□□ 0.83
PRKCSH-204ENST00000587290 APLP1P51693 650 aa20.22■□□□□ 0.83
PRKCSH-204ENST00000587290 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-204ENST00000587290 NUP98P52948 1817 aa20.19■□□□□ 0.82
PRKCSH-204ENST00000587290 FAM177BA6PVY3 158 aa20.19■□□□□ 0.82
PRKCSH-204ENST00000587290 ST5P78524 1137 aa20.19■□□□□ 0.82
PRKCSH-204ENST00000587290 TAF7Q15545 349 aaPredicted RBP20.19■□□□□ 0.82
PRKCSH-204ENST00000587290 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-204ENST00000587290 DNAJC5GQ8N7S2 189 aa20.18■□□□□ 0.82
PRKCSH-204ENST00000587290 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
PRKCSH-204ENST00000587290 GLTPD2A6NH11 291 aa20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 SRGNP10124 158 aa20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 HLFQ16534 295 aa20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 PRPF40BQ6NWY9 871 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 ZC3H4Q9UPT8 1303 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-204ENST00000587290 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRKCSH-204ENST00000587290 FSTL1Q12841 308 aa20.15■□□□□ 0.82
PRKCSH-204ENST00000587290 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
PRKCSH-204ENST00000587290 NFE2L2Q16236 605 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 STYK1Q6J9G0 422 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 OLFM4Q6UX06 510 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 CLEC4GQ6UXB4 293 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 PCNTO95613 3336 aa20.14■□□□□ 0.81
PRKCSH-204ENST00000587290 POTECB2RU33 542 aa20.13■□□□□ 0.81
PRKCSH-204ENST00000587290 NEFMP07197 916 aa20.13■□□□□ 0.81
PRKCSH-204ENST00000587290 CNKSR1Q969H4 720 aa20.13■□□□□ 0.81
PRKCSH-204ENST00000587290 MASTLQ96GX5 879 aa20.13■□□□□ 0.81
PRKCSH-204ENST00000587290 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
PRKCSH-204ENST00000587290 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
PRKCSH-204ENST00000587290 SMC1BQ8NDV3 1235 aa20.12■□□□□ 0.81
PRKCSH-204ENST00000587290 ABCC12Q96J65 1359 aa20.11■□□□□ 0.81
PRKCSH-204ENST00000587290 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-204ENST00000587290 IFFO2Q5TF58 517 aa20.11■□□□□ 0.81
PRKCSH-204ENST00000587290 TTLL7Q6ZT98 887 aa20.11■□□□□ 0.81
PRKCSH-204ENST00000587290 RRP7AQ9Y3A4 280 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-204ENST00000587290 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
PRKCSH-204ENST00000587290 MYL6BP14649 208 aa20.1■□□□□ 0.81
PRKCSH-204ENST00000587290 LTBP3Q9NS15 1303 aa20.09■□□□□ 0.81
PRKCSH-204ENST00000587290 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
PRKCSH-204ENST00000587290 C7orf43Q8WVR3 580 aa20.09■□□□□ 0.81
PRKCSH-204ENST00000587290 DDNO94850 711 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-204ENST00000587290 NPR1P16066 1061 aa20.08■□□□□ 0.81
PRKCSH-204ENST00000587290 TPTE2Q6XPS3 522 aa20.08■□□□□ 0.81
PRKCSH-204ENST00000587290 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
PRKCSH-204ENST00000587290 ZBTB3Q9H5J0 574 aa20.08■□□□□ 0.81
PRKCSH-204ENST00000587290 POTEIP0CG38 1075 aa20.07■□□□□ 0.8
PRKCSH-204ENST00000587290 POTEJP0CG39 1038 aa20.07■□□□□ 0.8
PRKCSH-204ENST00000587290 GPTP24298 496 aa20.07■□□□□ 0.8
PRKCSH-204ENST00000587290 DPY19L2Q6NUT2 758 aa20.07■□□□□ 0.8
PRKCSH-204ENST00000587290 SLC51AQ86UW1 340 aa20.07■□□□□ 0.8
PRKCSH-204ENST00000587290 PNISRQ8TF01 805 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-204ENST00000587290 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
PRKCSH-204ENST00000587290 UBN2Q6ZU65 1347 aa20.06■□□□□ 0.8
PRKCSH-204ENST00000587290 KLRG2A4D1S0 409 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-204ENST00000587290 CCDC93Q567U6 631 aa20.06■□□□□ 0.8
PRKCSH-204ENST00000587290 ZNF277Q9NRM2 450 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-204ENST00000587290 GTF2E1P29083 439 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-204ENST00000587290 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
PRKCSH-204ENST00000587290 ANXA1P04083 346 aa20.04■□□□□ 0.8
PRKCSH-204ENST00000587290 SOGA3Q5TF21 947 aa20.04■□□□□ 0.8
PRKCSH-204ENST00000587290 KIF6Q6ZMV9 814 aa20.04■□□□□ 0.8
PRKCSH-204ENST00000587290 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
PRKCSH-204ENST00000587290 RGL2O15211 777 aa20.03■□□□□ 0.8
PRKCSH-204ENST00000587290 RIPK4P57078 832 aa20.03■□□□□ 0.8
PRKCSH-204ENST00000587290 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-204ENST00000587290 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
PRKCSH-204ENST00000587290 ANKRD36CQ5JPF3 1778 aa20.03■□□□□ 0.8
PRKCSH-204ENST00000587290 SCN4AP35499 1836 aa20.02■□□□□ 0.8
PRKCSH-204ENST00000587290 ERVV-1B6SEH8 477 aa20.02■□□□□ 0.8
PRKCSH-204ENST00000587290 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.8
PRKCSH-204ENST00000587290 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.8
PRKCSH-204ENST00000587290 PROSER3Q2NL68 480 aa20.02■□□□□ 0.8
PRKCSH-204ENST00000587290 NECTIN2Q92692 538 aa20.02■□□□□ 0.8
PRKCSH-204ENST00000587290 SNED1Q8TER0 1413 aa20.02■□□□□ 0.79
PRKCSH-204ENST00000587290 COL4A5P29400 1685 aa20.01■□□□□ 0.79
PRKCSH-204ENST00000587290 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
PRKCSH-204ENST00000587290 C3orf67Q6ZVT6 689 aa20.01■□□□□ 0.79
PRKCSH-204ENST00000587290 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-204ENST00000587290 LAMB2P55268 1798 aa20■□□□□ 0.79
PRKCSH-204ENST00000587290 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
PRKCSH-204ENST00000587290 RALBP1Q15311 655 aa20■□□□□ 0.79
PRKCSH-204ENST00000587290 NEUROD2Q15784 382 aa20■□□□□ 0.79
PRKCSH-204ENST00000587290 LRP10Q7Z4F1 713 aa20■□□□□ 0.79
PRKCSH-204ENST00000587290 JMYQ8N9B5 988 aa20■□□□□ 0.79
PRKCSH-204ENST00000587290 NYXQ9GZU5 481 aa20■□□□□ 0.79
PRKCSH-204ENST00000587290 PDIA6Q15084 440 aa19.99■□□□□ 0.79
PRKCSH-204ENST00000587290 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
PRKCSH-204ENST00000587290 CRY2Q49AN0 593 aa19.99■□□□□ 0.79
PRKCSH-204ENST00000587290 TCERG1O14776 1098 aaKnown RBP19.98■□□□□ 0.79
PRKCSH-204ENST00000587290 NTSR2O95665 410 aa19.98■□□□□ 0.79
PRKCSH-204ENST00000587290 ZNF34Q8IZ26 560 aa19.98■□□□□ 0.79
PRKCSH-204ENST00000587290 SYNE4Q8N205 404 aa19.98■□□□□ 0.79
PRKCSH-204ENST00000587290 TAF1P21675 1872 aa19.97■□□□□ 0.79
PRKCSH-204ENST00000587290 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms