RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	KDM2B	Q8NHM5	1336 aa		33.31	■■■□□ 2.92
TCF3-210	ENST00000587235	PRELP	P51888	382 aa		33.31	■■■□□ 2.92
TCF3-210	ENST00000587235	RGL2	O15211	777 aa		33.3	■■■□□ 2.92
TCF3-210	ENST00000587235	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.3	■■■□□ 2.92
TCF3-210	ENST00000587235	NFKBIE	O00221	500 aa		33.29	■■■□□ 2.92
TCF3-210	ENST00000587235	C21orf2	O43822	256 aa		33.29	■■■□□ 2.92
TCF3-210	ENST00000587235	RIPK4	P57078	832 aa		33.29	■■■□□ 2.92
TCF3-210	ENST00000587235	NGEF	Q8N5V2	710 aa		33.29	■■■□□ 2.92
TCF3-210	ENST00000587235	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.29	■■■□□ 2.92
TCF3-210	ENST00000587235	SRGN	P10124	158 aa		33.28	■■■□□ 2.92
TCF3-210	ENST00000587235	HLF	Q16534	295 aa		33.28	■■■□□ 2.92
TCF3-210	ENST00000587235	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.28	■■■□□ 2.92
TCF3-210	ENST00000587235	KDM3B	Q7LBC6	1761 aa		33.27	■■■□□ 2.92
TCF3-210	ENST00000587235	STYK1	Q6J9G0	422 aa		33.27	■■■□□ 2.92
TCF3-210	ENST00000587235	CNKSR1	Q969H4	720 aa		33.27	■■■□□ 2.92
TCF3-210	ENST00000587235	RRAGC	Q9HB90	399 aa		33.27	■■■□□ 2.92
TCF3-210	ENST00000587235	RRP7A	Q9Y3A4	280 aa	Known RBP	33.27	■■■□□ 2.92
TCF3-210	ENST00000587235	TPTE2	Q6XPS3	522 aa		33.26	■■■□□ 2.91
TCF3-210	ENST00000587235	MASTL	Q96GX5	879 aa		33.26	■■■□□ 2.91
TCF3-210	ENST00000587235	CEP350	Q5VT06	3117 aa		33.26	■■■□□ 2.91
TCF3-210	ENST00000587235	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.26	■■■□□ 2.91
TCF3-210	ENST00000587235	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.25	■■■□□ 2.91
TCF3-210	ENST00000587235	FAM177B	A6PVY3	158 aa		33.24	■■■□□ 2.91
TCF3-210	ENST00000587235	COL11A2	P13942	1736 aa	Predicted RBP	33.24	■■■□□ 2.91
TCF3-210	ENST00000587235	TMPO	P42166	694 aa	Known RBP	33.23	■■■□□ 2.91
TCF3-210	ENST00000587235	TSPYL4	Q9UJ04	414 aa		33.23	■■■□□ 2.91
TCF3-210	ENST00000587235	LAMB4	A4D0S4	1761 aa		33.22	■■■□□ 2.91
TCF3-210	ENST00000587235	RBM46	Q8TBY0	533 aa	Known RBP	33.22	■■■□□ 2.91
TCF3-210	ENST00000587235	ERVV-1	B6SEH8	477 aa		33.21	■■■□□ 2.91
TCF3-210	ENST00000587235	MYL6B	P14649	208 aa		33.21	■■■□□ 2.91
TCF3-210	ENST00000587235	PRPF40B	Q6NWY9	871 aa	Known RBP	33.21	■■■□□ 2.91
TCF3-210	ENST00000587235	GLTPD2	A6NH11	291 aa		33.2	■■■□□ 2.91
TCF3-210	ENST00000587235	TTLL7	Q6ZT98	887 aa		33.2	■■■□□ 2.91
TCF3-210	ENST00000587235	CCDC88A	Q3V6T2	1871 aa		33.2	■■■□□ 2.9
TCF3-210	ENST00000587235	KLRG2	A4D1S0	409 aa	Predicted RBP	33.19	■■■□□ 2.9
TCF3-210	ENST00000587235	CCDC146	Q8IYE0	955 aa		33.19	■■■□□ 2.9
TCF3-210	ENST00000587235	MAP3K15	Q6ZN16	1313 aa		33.19	■■■□□ 2.9
TCF3-210	ENST00000587235	SLX4	Q8IY92	1834 aa		33.18	■■■□□ 2.9
TCF3-210	ENST00000587235	NPR1	P16066	1061 aa		33.18	■■■□□ 2.9
TCF3-210	ENST00000587235	LMOD3	Q0VAK6	560 aa		33.18	■■■□□ 2.9
TCF3-210	ENST00000587235	KIF6	Q6ZMV9	814 aa		33.18	■■■□□ 2.9
TCF3-210	ENST00000587235	GTF2E1	P29083	439 aa	Predicted RBP	33.17	■■■□□ 2.9
TCF3-210	ENST00000587235	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.16	■■■□□ 2.9
TCF3-210	ENST00000587235	APLP1	P51693	650 aa		33.16	■■■□□ 2.9
TCF3-210	ENST00000587235	WDR43	Q15061	677 aa	Known RBP eCLIP	33.16	■■■□□ 2.9
TCF3-210	ENST00000587235	NEUROD2	Q15784	382 aa		33.16	■■■□□ 2.9
TCF3-210	ENST00000587235	BABAM1	Q9NWV8	329 aa		33.16	■■■□□ 2.9
TCF3-210	ENST00000587235	SOGA3	Q5TF21	947 aa		33.15	■■■□□ 2.9
TCF3-210	ENST00000587235	TAOK3	Q9H2K8	898 aa		33.15	■■■□□ 2.9
TCF3-210	ENST00000587235	LTBP3	Q9NS15	1303 aa		33.14	■■■□□ 2.9
TCF3-210	ENST00000587235	EIF2S2	P20042	333 aa	Known RBP	33.14	■■■□□ 2.9
TCF3-210	ENST00000587235	ERFE	Q4G0M1	354 aa		33.14	■■■□□ 2.9
TCF3-210	ENST00000587235	C7orf43	Q8WVR3	580 aa		33.14	■■■□□ 2.9
TCF3-210	ENST00000587235	ZBTB3	Q9H5J0	574 aa		33.14	■■■□□ 2.9
TCF3-210	ENST00000587235	FER1L6	Q2WGJ9	1857 aa		33.14	■■■□□ 2.9
TCF3-210	ENST00000587235	ERBB4	Q15303	1308 aa		33.13	■■■□□ 2.89
TCF3-210	ENST00000587235	FSTL1	Q12841	308 aa		33.13	■■■□□ 2.89
TCF3-210	ENST00000587235	NYX	Q9GZU5	481 aa		33.13	■■■□□ 2.89
TCF3-210	ENST00000587235	VEGFA	P15692	232 aa	Predicted RBP	33.12	■■■□□ 2.89
TCF3-210	ENST00000587235	DPY19L2	Q6NUT2	758 aa		33.12	■■■□□ 2.89
TCF3-210	ENST00000587235	RUNDC1	Q96C34	613 aa		33.12	■■■□□ 2.89
TCF3-210	ENST00000587235	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.11	■■■□□ 2.89
TCF3-210	ENST00000587235	ADAMTS8	Q9UP79	889 aa		33.11	■■■□□ 2.89
TCF3-210	ENST00000587235	CACNA1S	Q13698	1873 aa		33.11	■■■□□ 2.89
TCF3-210	ENST00000587235	GPT	P24298	496 aa		33.1	■■■□□ 2.89
TCF3-210	ENST00000587235	NUTM1	Q86Y26	1132 aa		33.1	■■■□□ 2.89
TCF3-210	ENST00000587235	NUP98	P52948	1817 aa		33.09	■■■□□ 2.89
TCF3-210	ENST00000587235	PDIA6	Q15084	440 aa		33.09	■■■□□ 2.89
TCF3-210	ENST00000587235	CCDC93	Q567U6	631 aa		33.08	■■■□□ 2.89
TCF3-210	ENST00000587235	TIAM2	Q8IVF5	1701 aa		33.08	■■■□□ 2.89
TCF3-210	ENST00000587235	ALDH1B1	P30837	517 aa		33.07	■■■□□ 2.88
TCF3-210	ENST00000587235	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.07	■■■□□ 2.88
TCF3-210	ENST00000587235	LRP10	Q7Z4F1	713 aa		33.07	■■■□□ 2.88
TCF3-210	ENST00000587235	ZNF34	Q8IZ26	560 aa		33.07	■■■□□ 2.88
TCF3-210	ENST00000587235	TRIM35	Q9UPQ4	493 aa		33.07	■■■□□ 2.88
TCF3-210	ENST00000587235	ARFGEF2	Q9Y6D5	1785 aa		33.06	■■■□□ 2.88
TCF3-210	ENST00000587235	UBN2	Q6ZU65	1347 aa		33.06	■■■□□ 2.88
TCF3-210	ENST00000587235	SUSD4	Q5VX71	490 aa		33.06	■■■□□ 2.88
TCF3-210	ENST00000587235	DICER1	Q9UPY3	1922 aa	Known RBP	33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	CHL1	O00533	1208 aa		33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	ANXA1	P04083	346 aa		33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	PROSER3	Q2NL68	480 aa		33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	SMC1B	Q8NDV3	1235 aa		33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	LAS1L	Q9Y4W2	734 aa	Known RBP	33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	ABCC12	Q96J65	1359 aa		33.05	■■■□□ 2.88
TCF3-210	ENST00000587235	POTEC	B2RU33	542 aa		33.04	■■■□□ 2.88
TCF3-210	ENST00000587235	OLFM4	Q6UX06	510 aa		33.04	■■■□□ 2.88
TCF3-210	ENST00000587235	NECTIN2	Q92692	538 aa		33.04	■■■□□ 2.88
TCF3-210	ENST00000587235	CRY2	Q49AN0	593 aa		33.03	■■■□□ 2.88
TCF3-210	ENST00000587235	DNAJC5G	Q8N7S2	189 aa		33.03	■■■□□ 2.88
TCF3-210	ENST00000587235	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.01	■■■□□ 2.87
TCF3-210	ENST00000587235	RTKN2	Q8IZC4	609 aa		33.01	■■■□□ 2.87
TCF3-210	ENST00000587235	IBTK	Q9P2D0	1353 aa	Predicted RBP	33	■■■□□ 2.87
TCF3-210	ENST00000587235	KRT24	Q2M2I5	525 aa		33	■■■□□ 2.87
TCF3-210	ENST00000587235	DDN	O94850	711 aa	Predicted RBP	32.99	■■■□□ 2.87
TCF3-210	ENST00000587235	NTSR2	O95665	410 aa		32.99	■■■□□ 2.87
TCF3-210	ENST00000587235	HTRA3	P83110	453 aa		32.99	■■■□□ 2.87
TCF3-210	ENST00000587235	PARP10	Q53GL7	1025 aa		32.99	■■■□□ 2.87
TCF3-210	ENST00000587235	COPS6	Q7L5N1	327 aa		32.99	■■■□□ 2.87
TCF3-210	ENST00000587235	PPP1R42	Q7Z4L9	355 aa		32.99	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms