RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 STYK1Q6J9G0 422 aa21.92■■□□□ 1.1
NPC1-205ENST00000587163 PRPF40BQ6NWY9 871 aaKnown RBP21.92■■□□□ 1.1
NPC1-205ENST00000587163 NPM2Q86SE8 214 aaKnown RBP21.92■■□□□ 1.1
NPC1-205ENST00000587163 CNKSR1Q969H4 720 aa21.92■■□□□ 1.1
NPC1-205ENST00000587163 NPHP1O15259 732 aa21.91■■□□□ 1.1
NPC1-205ENST00000587163 ST5P78524 1137 aa21.91■■□□□ 1.1
NPC1-205ENST00000587163 TAOK3Q9H2K8 898 aa21.91■■□□□ 1.1
NPC1-205ENST00000587163 BCORQ6W2J9 1755 aa21.91■■□□□ 1.1
NPC1-205ENST00000587163 CACNA1SQ13698 1873 aa21.9■■□□□ 1.1
NPC1-205ENST00000587163 DDNO94850 711 aaPredicted RBP21.9■■□□□ 1.1
NPC1-205ENST00000587163 POTEIP0CG38 1075 aa21.9■■□□□ 1.1
NPC1-205ENST00000587163 POTEJP0CG39 1038 aa21.9■■□□□ 1.1
NPC1-205ENST00000587163 MASTLQ96GX5 879 aa21.9■■□□□ 1.1
NPC1-205ENST00000587163 HSPA1AP0DMV8 641 aaKnown RBP21.89■■□□□ 1.09
NPC1-205ENST00000587163 HSPA1BP0DMV9 641 aaKnown RBP21.89■■□□□ 1.09
NPC1-205ENST00000587163 MCM10Q7L590 875 aa21.89■■□□□ 1.09
NPC1-205ENST00000587163 TNS4Q8IZW8 715 aa21.88■■□□□ 1.09
NPC1-205ENST00000587163 C7orf43Q8WVR3 580 aa21.88■■□□□ 1.09
NPC1-205ENST00000587163 CAPN15O75808 1086 aa21.87■■□□□ 1.09
NPC1-205ENST00000587163 CHADLQ6NUI6 762 aa21.87■■□□□ 1.09
NPC1-205ENST00000587163 CLEC4GQ6UXB4 293 aa21.87■■□□□ 1.09
NPC1-205ENST00000587163 NBPF5PQ86XG9 351 aaPredicted RBP21.87■■□□□ 1.09
NPC1-205ENST00000587163 CFAP53Q96M91 514 aa21.87■■□□□ 1.09
NPC1-205ENST00000587163 ARFGEF2Q9Y6D5 1785 aa21.87■■□□□ 1.09
NPC1-205ENST00000587163 NBPF26B4DH59 902 aa21.86■■□□□ 1.09
NPC1-205ENST00000587163 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
NPC1-205ENST00000587163 DCTN1Q14203 1278 aa21.86■■□□□ 1.09
NPC1-205ENST00000587163 NBPF10Q6P3W6 841 aaKnown RBP21.86■■□□□ 1.09
NPC1-205ENST00000587163 NBPF15Q8N660 670 aa21.86■■□□□ 1.09
NPC1-205ENST00000587163 SOGA3Q5TF21 947 aa21.85■■□□□ 1.09
NPC1-205ENST00000587163 KLRG2A4D1S0 409 aaPredicted RBP21.84■■□□□ 1.09
NPC1-205ENST00000587163 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
NPC1-205ENST00000587163 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
NPC1-205ENST00000587163 RTF1Q92541 710 aaKnown RBP21.84■■□□□ 1.09
NPC1-205ENST00000587163 NPR1P16066 1061 aa21.83■■□□□ 1.09
NPC1-205ENST00000587163 OLFM4Q6UX06 510 aa21.83■■□□□ 1.09
NPC1-205ENST00000587163 NUDCQ9Y266 331 aa21.83■■□□□ 1.09
NPC1-205ENST00000587163 PPP2R1AP30153 589 aa21.82■■□□□ 1.08
NPC1-205ENST00000587163 CREBZFQ9NS37 354 aa21.82■■□□□ 1.08
NPC1-205ENST00000587163 NIP7Q9Y221 180 aaKnown RBP eCLIP21.82■■□□□ 1.08
NPC1-205ENST00000587163 ZNF652Q9Y2D9 606 aa21.82■■□□□ 1.08
NPC1-205ENST00000587163 FAM177BA6PVY3 158 aa21.81■■□□□ 1.08
NPC1-205ENST00000587163 CCDC93Q567U6 631 aa21.81■■□□□ 1.08
NPC1-205ENST00000587163 TPTE2Q6XPS3 522 aa21.81■■□□□ 1.08
NPC1-205ENST00000587163 MKRN1Q9UHC7 482 aaKnown RBP21.81■■□□□ 1.08
NPC1-205ENST00000587163 HLFQ16534 295 aa21.8■■□□□ 1.08
NPC1-205ENST00000587163 L3MBTL3Q96JM7 780 aaPredicted RBP21.8■■□□□ 1.08
NPC1-205ENST00000587163 TAF1DQ9H5J8 278 aaPredicted RBP21.8■■□□□ 1.08
NPC1-205ENST00000587163 ZNF277Q9NRM2 450 aaPredicted RBP21.8■■□□□ 1.08
NPC1-205ENST00000587163 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
NPC1-205ENST00000587163 FKBP4Q02790 459 aaKnown RBP eCLIP21.79■■□□□ 1.08
NPC1-205ENST00000587163 ZNF541Q9H0D2 1346 aa21.79■■□□□ 1.08
NPC1-205ENST00000587163 IQCA1LA6NCM1 817 aa21.78■■□□□ 1.08
NPC1-205ENST00000587163 TAF7Q15545 349 aaPredicted RBP21.78■■□□□ 1.08
NPC1-205ENST00000587163 PASKQ96RG2 1323 aa21.78■■□□□ 1.08
NPC1-205ENST00000587163 RGL2O15211 777 aa21.77■■□□□ 1.08
NPC1-205ENST00000587163 HTATSF1O43719 755 aaKnown RBP21.77■■□□□ 1.08
NPC1-205ENST00000587163 LDHDQ86WU2 507 aa21.77■■□□□ 1.08
NPC1-205ENST00000587163 SCN4AP35499 1836 aa21.77■■□□□ 1.08
NPC1-205ENST00000587163 ITGBL1O95965 494 aaPredicted RBP21.75■■□□□ 1.07
NPC1-205ENST00000587163 RTKN2Q8IZC4 609 aa21.75■■□□□ 1.07
NPC1-205ENST00000587163 SYNE4Q8N205 404 aa21.74■■□□□ 1.07
NPC1-205ENST00000587163 NGEFQ8N5V2 710 aa21.74■■□□□ 1.07
NPC1-205ENST00000587163 CNTNAP1P78357 1384 aa21.74■■□□□ 1.07
NPC1-205ENST00000587163 GTF2E1P29083 439 aaPredicted RBP21.73■■□□□ 1.07
NPC1-205ENST00000587163 ALDH1B1P30837 517 aa21.73■■□□□ 1.07
NPC1-205ENST00000587163 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
NPC1-205ENST00000587163 FZD9O00144 591 aa21.72■■□□□ 1.07
NPC1-205ENST00000587163 IARSP41252 1262 aaKnown RBP21.72■■□□□ 1.07
NPC1-205ENST00000587163 NUTM1Q86Y26 1132 aa21.72■■□□□ 1.07
NPC1-205ENST00000587163 HACL1Q9UJ83 578 aa21.72■■□□□ 1.07
NPC1-205ENST00000587163 ABCC12Q96J65 1359 aa21.72■■□□□ 1.07
NPC1-205ENST00000587163 FOXN1O15353 648 aa21.71■■□□□ 1.07
NPC1-205ENST00000587163 SNED1Q8TER0 1413 aa21.71■■□□□ 1.07
NPC1-205ENST00000587163 LAMB4A4D0S4 1761 aa21.7■■□□□ 1.06
NPC1-205ENST00000587163 ADAMTSL1Q8N6G6 1762 aa21.7■■□□□ 1.06
NPC1-205ENST00000587163 EPHX2P34913 555 aa21.7■■□□□ 1.06
NPC1-205ENST00000587163 CRY2Q49AN0 593 aa21.7■■□□□ 1.06
NPC1-205ENST00000587163 CLEC11AQ9Y240 323 aa21.7■■□□□ 1.06
NPC1-205ENST00000587163 RRP7AQ9Y3A4 280 aaKnown RBP21.7■■□□□ 1.06
NPC1-205ENST00000587163 RNF123Q5XPI4 1314 aa21.7■■□□□ 1.06
NPC1-205ENST00000587163 TMEM88BA6NKF7 163 aa21.69■■□□□ 1.06
NPC1-205ENST00000587163 ERVV-1B6SEH8 477 aa21.69■■□□□ 1.06
NPC1-205ENST00000587163 VEGFBP49765 207 aa21.69■■□□□ 1.06
NPC1-205ENST00000587163 TTLL7Q6ZT98 887 aa21.69■■□□□ 1.06
NPC1-205ENST00000587163 NUP98P52948 1817 aa21.69■■□□□ 1.06
NPC1-205ENST00000587163 DLG5Q8TDM6 1919 aa21.68■■□□□ 1.06
NPC1-205ENST00000587163 EIF4A1P60842 406 aaKnown RBP21.68■■□□□ 1.06
NPC1-205ENST00000587163 MAP1SQ66K74 1059 aaPredicted RBP21.68■■□□□ 1.06
NPC1-205ENST00000587163 SLC51AQ86UW1 340 aa21.68■■□□□ 1.06
NPC1-205ENST00000587163 THUMPD2Q9BTF0 503 aaKnown RBP21.68■■□□□ 1.06
NPC1-205ENST00000587163 NYXQ9GZU5 481 aa21.68■■□□□ 1.06
NPC1-205ENST00000587163 MAP3K15Q6ZN16 1313 aa21.68■■□□□ 1.06
NPC1-205ENST00000587163 KDM3BQ7LBC6 1761 aa21.67■■□□□ 1.06
NPC1-205ENST00000587163 COL4A5P29400 1685 aa21.67■■□□□ 1.06
NPC1-205ENST00000587163 GPTP24298 496 aa21.67■■□□□ 1.06
NPC1-205ENST00000587163 GPC2Q8N158 579 aa21.67■■□□□ 1.06
NPC1-205ENST00000587163 PSMD1Q99460 953 aa21.67■■□□□ 1.06
NPC1-205ENST00000587163 UBN2Q6ZU65 1347 aa21.66■■□□□ 1.06
NPC1-205ENST00000587163 MYL6BP14649 208 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms