RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 TPTE2Q6XPS3 522 aa26.38■■□□□ 1.81
VAT1-203ENST00000587062 ARHGAP27Q6ZUM4 889 aa26.38■■□□□ 1.81
VAT1-203ENST00000587062 NBPF5PQ86XG9 351 aaPredicted RBP26.38■■□□□ 1.81
VAT1-203ENST00000587062 NIP7Q9Y221 180 aaKnown RBP eCLIP26.38■■□□□ 1.81
VAT1-203ENST00000587062 KIAA1551Q9HCM1 1747 aa26.37■■□□□ 1.81
VAT1-203ENST00000587062 GNAI1P63096 354 aa26.37■■□□□ 1.81
VAT1-203ENST00000587062 C2CD5Q86YS7 1000 aa26.37■■□□□ 1.81
VAT1-203ENST00000587062 BCORQ6W2J9 1755 aa26.37■■□□□ 1.81
VAT1-203ENST00000587062 GTF2E1P29083 439 aaPredicted RBP26.36■■□□□ 1.81
VAT1-203ENST00000587062 PRR5LQ6MZQ0 368 aa26.36■■□□□ 1.81
VAT1-203ENST00000587062 CHMP4AQ9BY43 222 aa26.36■■□□□ 1.81
VAT1-203ENST00000587062 HOXB7P09629 217 aa26.35■■□□□ 1.81
VAT1-203ENST00000587062 TTLL6Q8N841 843 aa26.35■■□□□ 1.81
VAT1-203ENST00000587062 MAP3K15Q6ZN16 1313 aa26.35■■□□□ 1.81
VAT1-203ENST00000587062 IFT57Q9NWB7 429 aa26.34■■□□□ 1.81
VAT1-203ENST00000587062 CCDC184Q52MB2 194 aa26.33■■□□□ 1.81
VAT1-203ENST00000587062 NYXQ9GZU5 481 aa26.33■■□□□ 1.81
VAT1-203ENST00000587062 BRCA1P38398 1863 aaKnown RBP26.32■■□□□ 1.8
VAT1-203ENST00000587062 ZNF622Q969S3 477 aaKnown RBP eCLIP26.31■■□□□ 1.8
VAT1-203ENST00000587062 HLFQ16534 295 aa26.3■■□□□ 1.8
VAT1-203ENST00000587062 ARFGEF1Q9Y6D6 1849 aa26.3■■□□□ 1.8
VAT1-203ENST00000587062 CCDC27Q2M243 656 aa26.29■■□□□ 1.8
VAT1-203ENST00000587062 NCBP3Q53F19 620 aaKnown RBP26.29■■□□□ 1.8
VAT1-203ENST00000587062 HDGFL1Q5TGJ6 251 aa26.29■■□□□ 1.8
VAT1-203ENST00000587062 TTLL7Q6ZT98 887 aa26.29■■□□□ 1.8
VAT1-203ENST00000587062 NECTIN2Q92692 538 aa26.29■■□□□ 1.8
VAT1-203ENST00000587062 ZBTB3Q9H5J0 574 aa26.29■■□□□ 1.8
VAT1-203ENST00000587062 DDX21Q9NR30 783 aaKnown RBP eCLIP26.29■■□□□ 1.8
VAT1-203ENST00000587062 MBIPQ9NS73 344 aa26.29■■□□□ 1.8
VAT1-203ENST00000587062 GIGYF2Q6Y7W6 1299 aaKnown RBP26.28■■□□□ 1.8
VAT1-203ENST00000587062 CNKSR1Q969H4 720 aa26.28■■□□□ 1.8
VAT1-203ENST00000587062 FAM177BA6PVY3 158 aa26.27■■□□□ 1.8
VAT1-203ENST00000587062 ZNF853P0CG23 659 aa26.27■■□□□ 1.8
VAT1-203ENST00000587062 HSP90AB3PQ58FF7 597 aa26.27■■□□□ 1.8
VAT1-203ENST00000587062 CCDC24Q8N4L8 307 aa26.27■■□□□ 1.8
VAT1-203ENST00000587062 DBF4Q9UBU7 674 aaPredicted RBP26.27■■□□□ 1.8
VAT1-203ENST00000587062 PDIA6Q15084 440 aa26.26■■□□□ 1.79
VAT1-203ENST00000587062 DUSP27Q5VZP5 1158 aa26.26■■□□□ 1.79
VAT1-203ENST00000587062 STYK1Q6J9G0 422 aa26.26■■□□□ 1.79
VAT1-203ENST00000587062 PPP1R42Q7Z4L9 355 aa26.26■■□□□ 1.79
VAT1-203ENST00000587062 MASTLQ96GX5 879 aa26.26■■□□□ 1.79
VAT1-203ENST00000587062 AIMP1Q12904 312 aaKnown RBP26.25■■□□□ 1.79
VAT1-203ENST00000587062 PARP10Q53GL7 1025 aa26.25■■□□□ 1.79
VAT1-203ENST00000587062 UTRNP46939 3433 aa26.24■■□□□ 1.79
VAT1-203ENST00000587062 ATP10DQ9P241 1426 aa26.24■■□□□ 1.79
VAT1-203ENST00000587062 COPS6Q7L5N1 327 aa26.24■■□□□ 1.79
VAT1-203ENST00000587062 GPBP1L1Q9HC44 474 aaPredicted RBP26.24■■□□□ 1.79
VAT1-203ENST00000587062 HYPKQ9NX55 129 aa26.24■■□□□ 1.79
VAT1-203ENST00000587062 DLEC1Q9Y238 1755 aa26.24■■□□□ 1.79
VAT1-203ENST00000587062 NUP98P52948 1817 aa26.23■■□□□ 1.79
VAT1-203ENST00000587062 KRT24Q2M2I5 525 aa26.23■■□□□ 1.79
VAT1-203ENST00000587062 SRGNP10124 158 aa26.22■■□□□ 1.79
VAT1-203ENST00000587062 NPR1P16066 1061 aa26.22■■□□□ 1.79
VAT1-203ENST00000587062 SOGA3Q5TF21 947 aa26.22■■□□□ 1.79
VAT1-203ENST00000587062 XAGE3Q8WTP9 111 aa26.22■■□□□ 1.79
VAT1-203ENST00000587062 CHPF2Q9P2E5 772 aa26.22■■□□□ 1.79
VAT1-203ENST00000587062 ANXA1P04083 346 aa26.21■■□□□ 1.79
VAT1-203ENST00000587062 GPTP24298 496 aa26.21■■□□□ 1.79
VAT1-203ENST00000587062 WWC1Q8IX03 1113 aa26.21■■□□□ 1.79
VAT1-203ENST00000587062 ZNF34Q8IZ26 560 aa26.21■■□□□ 1.79
VAT1-203ENST00000587062 FAM9BQ8IZU0 186 aa26.21■■□□□ 1.79
VAT1-203ENST00000587062 IBTKQ9P2D0 1353 aaPredicted RBP26.2■■□□□ 1.79
VAT1-203ENST00000587062 ANKRD31Q8N7Z5 1873 aa26.2■■□□□ 1.78
VAT1-203ENST00000587062 ALDH1B1P30837 517 aa26.2■■□□□ 1.78
VAT1-203ENST00000587062 PROSER3Q2NL68 480 aa26.2■■□□□ 1.78
VAT1-203ENST00000587062 LRP10Q7Z4F1 713 aa26.2■■□□□ 1.78
VAT1-203ENST00000587062 GOLGB1Q14789 3259 aaKnown RBP26.19■■□□□ 1.78
VAT1-203ENST00000587062 C9orf131Q5VYM1 1079 aa26.19■■□□□ 1.78
VAT1-203ENST00000587062 ADCY9O60503 1353 aa26.19■■□□□ 1.78
VAT1-203ENST00000587062 IL16Q14005 1332 aa26.18■■□□□ 1.78
VAT1-203ENST00000587062 KLRG2A4D1S0 409 aaPredicted RBP26.17■■□□□ 1.78
VAT1-203ENST00000587062 ELL2O00472 640 aaPredicted RBP26.17■■□□□ 1.78
VAT1-203ENST00000587062 CCDC30Q5VVM6 783 aa26.17■■□□□ 1.78
VAT1-203ENST00000587062 ANKRD13DQ6ZTN6 518 aa26.17■■□□□ 1.78
VAT1-203ENST00000587062 UTP14AQ9BVJ6 771 aaKnown RBP26.17■■□□□ 1.78
VAT1-203ENST00000587062 RNF181Q9P0P0 153 aa26.17■■□□□ 1.78
VAT1-203ENST00000587062 RNF123Q5XPI4 1314 aa26.16■■□□□ 1.78
VAT1-203ENST00000587062 C21orf2O43822 256 aa26.16■■□□□ 1.78
VAT1-203ENST00000587062 LMNB1P20700 586 aa26.16■■□□□ 1.78
VAT1-203ENST00000587062 SUSD4Q5VX71 490 aa26.16■■□□□ 1.78
VAT1-203ENST00000587062 NUTM1Q86Y26 1132 aa26.16■■□□□ 1.78
VAT1-203ENST00000587062 PLBD2Q8NHP8 589 aa26.16■■□□□ 1.78
VAT1-203ENST00000587062 ZNF526Q8TF50 670 aaPredicted RBP26.16■■□□□ 1.78
VAT1-203ENST00000587062 TCIRG1Q13488 830 aa26.15■■□□□ 1.78
VAT1-203ENST00000587062 ERFEQ4G0M1 354 aa26.15■■□□□ 1.78
VAT1-203ENST00000587062 PRPF40BQ6NWY9 871 aaKnown RBP26.15■■□□□ 1.78
VAT1-203ENST00000587062 WDR63Q8IWG1 891 aa26.15■■□□□ 1.78
VAT1-203ENST00000587062 RPGRQ92834 1020 aaKnown RBP26.15■■□□□ 1.78
VAT1-203ENST00000587062 GOLGA2Q08379 1002 aa26.14■■□□□ 1.78
VAT1-203ENST00000587062 NLRP3Q96P20 1036 aa26.14■■□□□ 1.78
VAT1-203ENST00000587062 ZNF219Q9P2Y4 722 aaPredicted RBP26.14■■□□□ 1.78
VAT1-203ENST00000587062 UBN2Q6ZU65 1347 aa26.14■■□□□ 1.77
VAT1-203ENST00000587062 SALL2Q9Y467 1007 aaPredicted RBP26.13■■□□□ 1.77
VAT1-203ENST00000587062 DDX58O95786 925 aaKnown RBP26.12■■□□□ 1.77
VAT1-203ENST00000587062 RIC3Q7Z5B4 369 aa26.12■■□□□ 1.77
VAT1-203ENST00000587062 C8orf58Q8NAV2 365 aa26.12■■□□□ 1.77
VAT1-203ENST00000587062 STK31Q9BXU1 1019 aa26.12■■□□□ 1.77
VAT1-203ENST00000587062 ZC3H4Q9UPT8 1303 aaKnown RBP26.12■■□□□ 1.77
VAT1-203ENST00000587062 NTSR2O95665 410 aa26.11■■□□□ 1.77
VAT1-203ENST00000587062 RBM17Q96I25 401 aaKnown RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms