RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 HSPA1BP0DMV9 641 aaKnown RBP16■□□□□ 0.15
BRCA1-225ENST00000586385 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
BRCA1-225ENST00000586385 SETDB2Q96T68 719 aa16■□□□□ 0.15
BRCA1-225ENST00000586385 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
BRCA1-225ENST00000586385 SLX4Q8IY92 1834 aa16■□□□□ 0.15
BRCA1-225ENST00000586385 PCNTO95613 3336 aa16■□□□□ 0.15
BRCA1-225ENST00000586385 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
BRCA1-225ENST00000586385 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
BRCA1-225ENST00000586385 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
BRCA1-225ENST00000586385 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
BRCA1-225ENST00000586385 CNKSR1Q969H4 720 aa15.99■□□□□ 0.15
BRCA1-225ENST00000586385 BCORQ6W2J9 1755 aa15.98■□□□□ 0.15
BRCA1-225ENST00000586385 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
BRCA1-225ENST00000586385 MASTLQ96GX5 879 aa15.98■□□□□ 0.15
BRCA1-225ENST00000586385 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-225ENST00000586385 OLFM4Q6UX06 510 aa15.97■□□□□ 0.15
BRCA1-225ENST00000586385 MCM10Q7L590 875 aa15.97■□□□□ 0.15
BRCA1-225ENST00000586385 TNS4Q8IZW8 715 aa15.97■□□□□ 0.15
BRCA1-225ENST00000586385 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.15
BRCA1-225ENST00000586385 ST5P78524 1137 aa15.96■□□□□ 0.15
BRCA1-225ENST00000586385 DCTN1Q14203 1278 aa15.96■□□□□ 0.15
BRCA1-225ENST00000586385 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
BRCA1-225ENST00000586385 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.15
BRCA1-225ENST00000586385 CAPN15O75808 1086 aa15.95■□□□□ 0.14
BRCA1-225ENST00000586385 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-225ENST00000586385 SNRPA1P09661 255 aaKnown RBP15.94■□□□□ 0.14
BRCA1-225ENST00000586385 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-225ENST00000586385 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
BRCA1-225ENST00000586385 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
BRCA1-225ENST00000586385 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
BRCA1-225ENST00000586385 PPP2R1AP30153 589 aa15.93■□□□□ 0.14
BRCA1-225ENST00000586385 HLFQ16534 295 aa15.93■□□□□ 0.14
BRCA1-225ENST00000586385 SOGA3Q5TF21 947 aa15.93■□□□□ 0.14
BRCA1-225ENST00000586385 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-225ENST00000586385 MKRN1Q9UHC7 482 aaKnown RBP15.93■□□□□ 0.14
BRCA1-225ENST00000586385 SNED1Q8TER0 1413 aa15.93■□□□□ 0.14
BRCA1-225ENST00000586385 ARFGEF2Q9Y6D5 1785 aa15.92■□□□□ 0.14
BRCA1-225ENST00000586385 NPHP1O15259 732 aa15.92■□□□□ 0.14
BRCA1-225ENST00000586385 NPR1P16066 1061 aa15.92■□□□□ 0.14
BRCA1-225ENST00000586385 CCDC93Q567U6 631 aa15.92■□□□□ 0.14
BRCA1-225ENST00000586385 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-225ENST00000586385 RGL2O15211 777 aa15.91■□□□□ 0.14
BRCA1-225ENST00000586385 ITGBL1O95965 494 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-225ENST00000586385 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-225ENST00000586385 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
BRCA1-225ENST00000586385 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
BRCA1-225ENST00000586385 NPM2Q86SE8 214 aaKnown RBP15.91■□□□□ 0.14
BRCA1-225ENST00000586385 CFAP53Q96M91 514 aa15.91■□□□□ 0.14
BRCA1-225ENST00000586385 NIP7Q9Y221 180 aaKnown RBP eCLIP15.91■□□□□ 0.14
BRCA1-225ENST00000586385 CNTNAP1P78357 1384 aa15.9■□□□□ 0.14
BRCA1-225ENST00000586385 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
BRCA1-225ENST00000586385 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
BRCA1-225ENST00000586385 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
BRCA1-225ENST00000586385 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
BRCA1-225ENST00000586385 CACNA1SQ13698 1873 aa15.89■□□□□ 0.13
BRCA1-225ENST00000586385 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
BRCA1-225ENST00000586385 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
BRCA1-225ENST00000586385 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
BRCA1-225ENST00000586385 IQCA1LA6NCM1 817 aa15.88■□□□□ 0.13
BRCA1-225ENST00000586385 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
BRCA1-225ENST00000586385 RTF1Q92541 710 aaKnown RBP15.88■□□□□ 0.13
BRCA1-225ENST00000586385 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
BRCA1-225ENST00000586385 COL4A5P29400 1685 aa15.88■□□□□ 0.13
BRCA1-225ENST00000586385 ADAMTSL1Q8N6G6 1762 aa15.87■□□□□ 0.13
BRCA1-225ENST00000586385 FZD9O00144 591 aa15.87■□□□□ 0.13
BRCA1-225ENST00000586385 FOXN1O15353 648 aa15.87■□□□□ 0.13
BRCA1-225ENST00000586385 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-225ENST00000586385 CRY2Q49AN0 593 aa15.87■□□□□ 0.13
BRCA1-225ENST00000586385 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
BRCA1-225ENST00000586385 RTKN2Q8IZC4 609 aa15.86■□□□□ 0.13
BRCA1-225ENST00000586385 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
BRCA1-225ENST00000586385 IARSP41252 1262 aaKnown RBP15.85■□□□□ 0.13
BRCA1-225ENST00000586385 VEGFBP49765 207 aa15.85■□□□□ 0.13
BRCA1-225ENST00000586385 TTLL7Q6ZT98 887 aa15.85■□□□□ 0.13
BRCA1-225ENST00000586385 HACL1Q9UJ83 578 aa15.85■□□□□ 0.13
BRCA1-225ENST00000586385 RNF123Q5XPI4 1314 aa15.85■□□□□ 0.13
BRCA1-225ENST00000586385 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
BRCA1-225ENST00000586385 SCN4AP35499 1836 aa15.84■□□□□ 0.13
BRCA1-225ENST00000586385 EPHX2P34913 555 aa15.84■□□□□ 0.13
BRCA1-225ENST00000586385 EAPPQ56P03 285 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-225ENST00000586385 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
BRCA1-225ENST00000586385 TMEM88BA6NKF7 163 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 ERVV-1B6SEH8 477 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 EIF4A1P60842 406 aaKnown RBP15.83■□□□□ 0.12
BRCA1-225ENST00000586385 MAP1SQ66K74 1059 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-225ENST00000586385 C3orf67Q6ZVT6 689 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 PLEKHF1Q96S99 279 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 PSMD1Q99460 953 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 MAP3K15Q6ZN16 1313 aa15.83■□□□□ 0.12
BRCA1-225ENST00000586385 ALDH1B1P30837 517 aa15.82■□□□□ 0.12
BRCA1-225ENST00000586385 HOXA10P31260 410 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-225ENST00000586385 LAMB4A4D0S4 1761 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 LTBP1Q14766 1721 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 LRP10Q7Z4F1 713 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 GPC2Q8N158 579 aa15.81■□□□□ 0.12
BRCA1-225ENST00000586385 WBP1LQ9NX94 342 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms