RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 ST5P78524 1137 aa28.39■■■□□ 2.14
CIRBP-205ENST00000585913 CCDC24Q8N4L8 307 aa28.39■■■□□ 2.14
CIRBP-205ENST00000585913 PDZRN3Q9UPQ7 1066 aa28.39■■■□□ 2.14
CIRBP-205ENST00000585913 NGEFQ8N5V2 710 aa28.38■■■□□ 2.13
CIRBP-205ENST00000585913 TTLL6Q8N841 843 aa28.38■■■□□ 2.13
CIRBP-205ENST00000585913 NBPF5PQ86XG9 351 aaPredicted RBP28.36■■■□□ 2.13
CIRBP-205ENST00000585913 NIP7Q9Y221 180 aaKnown RBP eCLIP28.36■■■□□ 2.13
CIRBP-205ENST00000585913 COL11A2P13942 1736 aaPredicted RBP28.35■■■□□ 2.13
CIRBP-205ENST00000585913 MYL6BP14649 208 aa28.35■■■□□ 2.13
CIRBP-205ENST00000585913 TRIM35Q9UPQ4 493 aa28.35■■■□□ 2.13
CIRBP-205ENST00000585913 ERBB4Q15303 1308 aa28.35■■■□□ 2.13
CIRBP-205ENST00000585913 KIF6Q6ZMV9 814 aa28.34■■■□□ 2.13
CIRBP-205ENST00000585913 ZNF622Q969S3 477 aaKnown RBP eCLIP28.34■■■□□ 2.13
CIRBP-205ENST00000585913 HLFQ16534 295 aa28.33■■■□□ 2.13
CIRBP-205ENST00000585913 C9orf131Q5VYM1 1079 aa28.33■■■□□ 2.13
CIRBP-205ENST00000585913 LAS1LQ9Y4W2 734 aaKnown RBP28.33■■■□□ 2.13
CIRBP-205ENST00000585913 ZNF316A6NFI3 1004 aaPredicted RBP28.32■■■□□ 2.12
CIRBP-205ENST00000585913 ERVV-1B6SEH8 477 aa28.31■■■□□ 2.12
CIRBP-205ENST00000585913 EIF2S2P20042 333 aaKnown RBP28.31■■■□□ 2.12
CIRBP-205ENST00000585913 MAP3K15Q6ZN16 1313 aa28.31■■■□□ 2.12
CIRBP-205ENST00000585913 NUP98P52948 1817 aa28.3■■■□□ 2.12
CIRBP-205ENST00000585913 TPTE2Q6XPS3 522 aa28.3■■■□□ 2.12
CIRBP-205ENST00000585913 TTLL7Q6ZT98 887 aa28.3■■■□□ 2.12
CIRBP-205ENST00000585913 RNF181Q9P0P0 153 aa28.3■■■□□ 2.12
CIRBP-205ENST00000585913 FAM177BA6PVY3 158 aa28.29■■■□□ 2.12
CIRBP-205ENST00000585913 CHL1O00533 1208 aa28.29■■■□□ 2.12
CIRBP-205ENST00000585913 SBF1O95248 1867 aa28.27■■■□□ 2.12
CIRBP-205ENST00000585913 RASSF7Q02833 373 aa28.27■■■□□ 2.12
CIRBP-205ENST00000585913 ZBTB3Q9H5J0 574 aa28.27■■■□□ 2.12
CIRBP-205ENST00000585913 CACNA1SQ13698 1873 aa28.26■■■□□ 2.11
CIRBP-205ENST00000585913 APAF1O14727 1248 aa28.26■■■□□ 2.11
CIRBP-205ENST00000585913 SRGNP10124 158 aa28.26■■■□□ 2.11
CIRBP-205ENST00000585913 STYK1Q6J9G0 422 aa28.26■■■□□ 2.11
CIRBP-205ENST00000585913 CNKSR1Q969H4 720 aa28.26■■■□□ 2.11
CIRBP-205ENST00000585913 GTF2E1P29083 439 aaPredicted RBP28.25■■■□□ 2.11
CIRBP-205ENST00000585913 MASTLQ96GX5 879 aa28.25■■■□□ 2.11
CIRBP-205ENST00000585913 NECTIN2Q92692 538 aa28.24■■■□□ 2.11
CIRBP-205ENST00000585913 NYXQ9GZU5 481 aa28.24■■■□□ 2.11
CIRBP-205ENST00000585913 ARFGEF2Q9Y6D5 1785 aa28.24■■■□□ 2.11
CIRBP-205ENST00000585913 CEP350Q5VT06 3117 aa28.23■■■□□ 2.11
CIRBP-205ENST00000585913 C21orf2O43822 256 aa28.23■■■□□ 2.11
CIRBP-205ENST00000585913 PDIA6Q15084 440 aa28.23■■■□□ 2.11
CIRBP-205ENST00000585913 KRT24Q2M2I5 525 aa28.23■■■□□ 2.11
CIRBP-205ENST00000585913 CFAP44Q96MT7 982 aa28.23■■■□□ 2.11
CIRBP-205ENST00000585913 ZNF219Q9P2Y4 722 aaPredicted RBP28.23■■■□□ 2.11
CIRBP-205ENST00000585913 ANXA1P04083 346 aa28.22■■■□□ 2.11
CIRBP-205ENST00000585913 LMNB1P20700 586 aa28.22■■■□□ 2.11
CIRBP-205ENST00000585913 GPTP24298 496 aa28.21■■■□□ 2.11
CIRBP-205ENST00000585913 PROSER3Q2NL68 480 aa28.21■■■□□ 2.11
CIRBP-205ENST00000585913 CCDC184Q52MB2 194 aa28.21■■■□□ 2.11
CIRBP-205ENST00000585913 PRPF40BQ6NWY9 871 aaKnown RBP28.21■■■□□ 2.11
CIRBP-205ENST00000585913 GIGYF2Q6Y7W6 1299 aaKnown RBP28.21■■■□□ 2.11
CIRBP-205ENST00000585913 LRP10Q7Z4F1 713 aa28.21■■■□□ 2.11
CIRBP-205ENST00000585913 NFKBIEO00221 500 aa28.2■■■□□ 2.1
CIRBP-205ENST00000585913 ANP32CO43423 234 aa28.2■■■□□ 2.1
CIRBP-205ENST00000585913 NPR1P16066 1061 aa28.2■■■□□ 2.1
CIRBP-205ENST00000585913 CALD1Q05682 793 aaKnown RBP28.2■■■□□ 2.1
CIRBP-205ENST00000585913 SLX4Q8IY92 1834 aa28.2■■■□□ 2.1
CIRBP-205ENST00000585913 KLRG2A4D1S0 409 aaPredicted RBP28.19■■■□□ 2.1
CIRBP-205ENST00000585913 KIF3CO14782 793 aa28.19■■■□□ 2.1
CIRBP-205ENST00000585913 UBN2Q6ZU65 1347 aa28.18■■■□□ 2.1
CIRBP-205ENST00000585913 HOXB7P09629 217 aa28.18■■■□□ 2.1
CIRBP-205ENST00000585913 NUTM1Q86Y26 1132 aa28.18■■■□□ 2.1
CIRBP-205ENST00000585913 DDX21Q9NR30 783 aaKnown RBP eCLIP28.18■■■□□ 2.1
CIRBP-205ENST00000585913 IBTKQ9P2D0 1353 aaPredicted RBP28.18■■■□□ 2.1
CIRBP-205ENST00000585913 FER1L6Q2WGJ9 1857 aa28.18■■■□□ 2.1
CIRBP-205ENST00000585913 CCDC88AQ3V6T2 1871 aa28.18■■■□□ 2.1
CIRBP-205ENST00000585913 KDM2BQ8NHM5 1336 aa28.18■■■□□ 2.1
CIRBP-205ENST00000585913 ZC3H4Q9UPT8 1303 aaKnown RBP28.18■■■□□ 2.1
CIRBP-205ENST00000585913 TNRC6CQ9HCJ0 1690 aaKnown RBP28.17■■■□□ 2.1
CIRBP-205ENST00000585913 SOGA3Q5TF21 947 aa28.17■■■□□ 2.1
CIRBP-205ENST00000585913 IFFO2Q5TF58 517 aa28.17■■■□□ 2.1
CIRBP-205ENST00000585913 HDGFL1Q5TGJ6 251 aa28.17■■■□□ 2.1
CIRBP-205ENST00000585913 ZNF34Q8IZ26 560 aa28.17■■■□□ 2.1
CIRBP-205ENST00000585913 MBIPQ9NS73 344 aa28.17■■■□□ 2.1
CIRBP-205ENST00000585913 ABCC12Q96J65 1359 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 TIAM2Q8IVF5 1701 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 HSPA6P17066 643 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 PRELPP51888 382 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 AIMP1Q12904 312 aaKnown RBP28.16■■■□□ 2.1
CIRBP-205ENST00000585913 COPS6Q7L5N1 327 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 NMRK2Q9NPI5 230 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 IFT57Q9NWB7 429 aa28.16■■■□□ 2.1
CIRBP-205ENST00000585913 GNAI1P63096 354 aa28.15■■■□□ 2.1
CIRBP-205ENST00000585913 ERFEQ4G0M1 354 aa28.15■■■□□ 2.1
CIRBP-205ENST00000585913 PARP10Q53GL7 1025 aa28.15■■■□□ 2.1
CIRBP-205ENST00000585913 SUSD4Q5VX71 490 aa28.15■■■□□ 2.1
CIRBP-205ENST00000585913 XAGE3Q8WTP9 111 aa28.15■■■□□ 2.1
CIRBP-205ENST00000585913 CHPF2Q9P2E5 772 aa28.15■■■□□ 2.1
CIRBP-205ENST00000585913 ZNF853P0CG23 659 aa28.14■■■□□ 2.1
CIRBP-205ENST00000585913 PPP1R42Q7Z4L9 355 aa28.14■■■□□ 2.1
CIRBP-205ENST00000585913 MRS2Q9HD23 443 aa28.14■■■□□ 2.1
CIRBP-205ENST00000585913 ANKRD36CQ5JPF3 1778 aa28.14■■■□□ 2.09
CIRBP-205ENST00000585913 DUSP27Q5VZP5 1158 aa28.13■■■□□ 2.09
CIRBP-205ENST00000585913 TAOK3Q9H2K8 898 aa28.13■■■□□ 2.09
CIRBP-205ENST00000585913 RIC1Q4ADV7 1423 aa28.12■■■□□ 2.09
CIRBP-205ENST00000585913 NTSR2O95665 410 aa28.12■■■□□ 2.09
CIRBP-205ENST00000585913 ALDH1B1P30837 517 aa28.12■■■□□ 2.09
CIRBP-205ENST00000585913 HSP90AB3PQ58FF7 597 aa28.12■■■□□ 2.09
CIRBP-205ENST00000585913 LTBP3Q9NS15 1303 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 784.2 ms