RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 MAP3K15Q6ZN16 1313 aa15.02■□□□□ -0
LRFN3-202ENST00000585876 POLRMTO00411 1230 aaKnown RBP15.02■□□□□ -0
LRFN3-202ENST00000585876 EIF2S2P20042 333 aaKnown RBP15.02■□□□□ -0
LRFN3-202ENST00000585876 GOLGA2Q08379 1002 aa15.02■□□□□ -0
LRFN3-202ENST00000585876 TSPYL6Q8N831 410 aa15.02■□□□□ -0
LRFN3-202ENST00000585876 FHDC1Q9C0D6 1143 aaPredicted RBP15.02■□□□□ -0
LRFN3-202ENST00000585876 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
LRFN3-202ENST00000585876 ZNF330Q9Y3S2 320 aaPredicted RBP15.02■□□□□ -0
LRFN3-202ENST00000585876 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
LRFN3-202ENST00000585876 E9PSI1 815 aa15.01□□□□□ -0.01
LRFN3-202ENST00000585876 MYL6BP14649 208 aa15.01□□□□□ -0.01
LRFN3-202ENST00000585876 NFIXQ14938 502 aa15.01□□□□□ -0.01
LRFN3-202ENST00000585876 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
LRFN3-202ENST00000585876 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
LRFN3-202ENST00000585876 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
LRFN3-202ENST00000585876 UTRNP46939 3433 aa15□□□□□ -0.01
LRFN3-202ENST00000585876 TWISTNBQ3B726 338 aaPredicted RBP15□□□□□ -0.01
LRFN3-202ENST00000585876 TRMT2AQ8IZ69 625 aaKnown RBP15□□□□□ -0.01
LRFN3-202ENST00000585876 HYPKQ9NX55 129 aa15□□□□□ -0.01
LRFN3-202ENST00000585876 LAMB2P55268 1798 aa15□□□□□ -0.01
LRFN3-202ENST00000585876 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
LRFN3-202ENST00000585876 ARFGEF1Q9Y6D6 1849 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 SLFN5Q08AF3 891 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 TBC1D9BQ66K14 1250 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 SYT17Q9BSW7 474 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
LRFN3-202ENST00000585876 ELL2O00472 640 aaPredicted RBP14.98□□□□□ -0.01
LRFN3-202ENST00000585876 ANXA1P04083 346 aa14.98□□□□□ -0.01
LRFN3-202ENST00000585876 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
LRFN3-202ENST00000585876 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
LRFN3-202ENST00000585876 RIC1Q4ADV7 1423 aa14.98□□□□□ -0.01
LRFN3-202ENST00000585876 VAMP4O75379 141 aa14.97□□□□□ -0.01
LRFN3-202ENST00000585876 GIGYF2Q6Y7W6 1299 aaKnown RBP14.97□□□□□ -0.01
LRFN3-202ENST00000585876 COPS6Q7L5N1 327 aa14.97□□□□□ -0.01
LRFN3-202ENST00000585876 XAGE3Q8WTP9 111 aa14.97□□□□□ -0.01
LRFN3-202ENST00000585876 TNRC6CQ9HCJ0 1690 aaKnown RBP14.97□□□□□ -0.01
LRFN3-202ENST00000585876 HLFQ16534 295 aa14.96□□□□□ -0.01
LRFN3-202ENST00000585876 ZBED9Q6R2W3 1325 aa14.95□□□□□ -0.02
LRFN3-202ENST00000585876 DDX60Q8IY21 1712 aaKnown RBP14.95□□□□□ -0.02
LRFN3-202ENST00000585876 SERPINB2P05120 415 aa14.95□□□□□ -0.02
LRFN3-202ENST00000585876 SETDB2Q96T68 719 aa14.95□□□□□ -0.02
LRFN3-202ENST00000585876 ZBTB3Q9H5J0 574 aa14.95□□□□□ -0.02
LRFN3-202ENST00000585876 CHD4Q14839 1912 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 HNRNPUQ00839 825 aaKnown RBP eCLIP14.94□□□□□ -0.02
LRFN3-202ENST00000585876 ZNF34Q8IZ26 560 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 PLBD2Q8NHP8 589 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 ZNF428Q96B54 188 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 CDCA7LQ96GN5 454 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 STK31Q9BXU1 1019 aa14.94□□□□□ -0.02
LRFN3-202ENST00000585876 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 CACNA1SQ13698 1873 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 CT47B1P0C2W7 299 aaPredicted RBP14.93□□□□□ -0.02
LRFN3-202ENST00000585876 TGFB2P61812 414 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 HSP90AB3PQ58FF7 597 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 BICDL1Q6ZP65 573 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
LRFN3-202ENST00000585876 NIP7Q9Y221 180 aaKnown RBP eCLIP14.93□□□□□ -0.02
LRFN3-202ENST00000585876 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
LRFN3-202ENST00000585876 MYH3P11055 1940 aa14.92□□□□□ -0.02
LRFN3-202ENST00000585876 CNBD1Q8NA66 436 aa14.92□□□□□ -0.02
LRFN3-202ENST00000585876 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
LRFN3-202ENST00000585876 ADCY9O60503 1353 aa14.91□□□□□ -0.02
LRFN3-202ENST00000585876 AIMP1Q12904 312 aaKnown RBP14.91□□□□□ -0.02
LRFN3-202ENST00000585876 TCIRG1Q13488 830 aa14.91□□□□□ -0.02
LRFN3-202ENST00000585876 PARP10Q53GL7 1025 aa14.91□□□□□ -0.02
LRFN3-202ENST00000585876 DDX58O95786 925 aaKnown RBP14.9□□□□□ -0.02
LRFN3-202ENST00000585876 TRIM28Q13263 835 aaKnown RBP14.9□□□□□ -0.02
LRFN3-202ENST00000585876 NBPF5PQ86XG9 351 aaPredicted RBP14.9□□□□□ -0.02
LRFN3-202ENST00000585876 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
LRFN3-202ENST00000585876 ISCA1Q9BUE6 129 aa14.9□□□□□ -0.02
LRFN3-202ENST00000585876 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
LRFN3-202ENST00000585876 NYXQ9GZU5 481 aa14.9□□□□□ -0.02
LRFN3-202ENST00000585876 PDZRN3Q9UPQ7 1066 aa14.9□□□□□ -0.02
LRFN3-202ENST00000585876 ABCC12Q96J65 1359 aa14.89□□□□□ -0.03
LRFN3-202ENST00000585876 NTSR2O95665 410 aa14.89□□□□□ -0.03
LRFN3-202ENST00000585876 SLC4A2P04920 1241 aa14.89□□□□□ -0.03
LRFN3-202ENST00000585876 FLIIQ13045 1269 aa14.89□□□□□ -0.03
LRFN3-202ENST00000585876 TPTE2Q6XPS3 522 aa14.89□□□□□ -0.03
LRFN3-202ENST00000585876 KLRG2A4D1S0 409 aaPredicted RBP14.88□□□□□ -0.03
LRFN3-202ENST00000585876 KCNA3P22001 575 aa14.88□□□□□ -0.03
LRFN3-202ENST00000585876 GPTP24298 496 aa14.88□□□□□ -0.03
LRFN3-202ENST00000585876 ST5P78524 1137 aa14.88□□□□□ -0.03
LRFN3-202ENST00000585876 KSR2Q6VAB6 950 aa14.88□□□□□ -0.03
LRFN3-202ENST00000585876 G2E3Q7L622 706 aa14.88□□□□□ -0.03
LRFN3-202ENST00000585876 NLRP10Q86W26 655 aa14.88□□□□□ -0.03
LRFN3-202ENST00000585876 TCERG1O14776 1098 aaKnown RBP14.87□□□□□ -0.03
LRFN3-202ENST00000585876 PDE6BP35913 854 aa14.87□□□□□ -0.03
LRFN3-202ENST00000585876 ALDH1L2Q3SY69 923 aa14.87□□□□□ -0.03
LRFN3-202ENST00000585876 SUSD4Q5VX71 490 aa14.87□□□□□ -0.03
LRFN3-202ENST00000585876 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
LRFN3-202ENST00000585876 FER1L6Q2WGJ9 1857 aa14.86□□□□□ -0.03
LRFN3-202ENST00000585876 PI4KAP2A4QPH2 592 aa14.86□□□□□ -0.03
LRFN3-202ENST00000585876 DPEP1P16444 411 aa14.86□□□□□ -0.03
LRFN3-202ENST00000585876 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms