RNA–Protein interactions for RNA: ENST00000585025.1

AC004253.2-201, humanhuman

TSL 3 BASIC

Gene AC004253.2, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004253.2-201ENST00000585025 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
AC004253.2-201ENST00000585025 NBPF10Q6P3W6 841 aaKnown RBP11.9□□□□□ -0.5
AC004253.2-201ENST00000585025 NBPF15Q8N660 670 aa11.9□□□□□ -0.5
AC004253.2-201ENST00000585025 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
AC004253.2-201ENST00000585025 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
AC004253.2-201ENST00000585025 E9PSI1 815 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 DDX58O95786 925 aaKnown RBP11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 NFIXQ14938 502 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 XAGE3Q8WTP9 111 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 NIP7Q9Y221 180 aaKnown RBP eCLIP11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
AC004253.2-201ENST00000585025 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 SERPINB2P05120 415 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 GPTP24298 496 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 GPR162Q16538 588 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 COPS6Q7L5N1 327 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 CNBD1Q8NA66 436 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
AC004253.2-201ENST00000585025 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
AC004253.2-201ENST00000585025 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
AC004253.2-201ENST00000585025 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
AC004253.2-201ENST00000585025 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
AC004253.2-201ENST00000585025 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
AC004253.2-201ENST00000585025 DDR1Q08345 913 aa11.86□□□□□ -0.51
AC004253.2-201ENST00000585025 HSP90AB3PQ58FF7 597 aa11.86□□□□□ -0.51
AC004253.2-201ENST00000585025 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
AC004253.2-201ENST00000585025 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
AC004253.2-201ENST00000585025 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
AC004253.2-201ENST00000585025 HLFQ16534 295 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 TRMT2AQ8IZ69 625 aaKnown RBP11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 C10orf71Q711Q0 1435 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
AC004253.2-201ENST00000585025 ERVV-1B6SEH8 477 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 NEXNQ0ZGT2 675 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 FKBP5Q13451 457 aaPredicted RBP11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 TPTE2Q6XPS3 522 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
AC004253.2-201ENST00000585025 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.51
AC004253.2-201ENST00000585025 SLFN5Q08AF3 891 aa11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 ZNF622Q969S3 477 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 MYD88Q99836 296 aa11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
AC004253.2-201ENST00000585025 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 H0YIN7 160 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 TM4SF1P30408 202 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 PDE6BP35913 854 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 TGFB2P61812 414 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 PDIA6Q15084 440 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
AC004253.2-201ENST00000585025 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 CT47B1P0C2W7 299 aaPredicted RBP11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 PRR5LQ6MZQ0 368 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 UTP14AQ9BVJ6 771 aaKnown RBP11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 BCL2L13Q9BXK5 485 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 SMC4Q9NTJ3 1288 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
AC004253.2-201ENST00000585025 VAMP4O75379 141 aa11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 DPEP1P16444 411 aa11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 CHRNA5P30532 468 aa11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 FLIIQ13045 1269 aa11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 PXDNLA1KZ92 1463 aa11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
AC004253.2-201ENST00000585025 RGL2O15211 777 aa11.79□□□□□ -0.52
AC004253.2-201ENST00000585025 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
AC004253.2-201ENST00000585025 SLC4A10Q6U841 1118 aa11.79□□□□□ -0.52
AC004253.2-201ENST00000585025 PIM2Q9P1W9 311 aa11.79□□□□□ -0.52
AC004253.2-201ENST00000585025 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
AC004253.2-201ENST00000585025 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
AC004253.2-201ENST00000585025 COL11A2P13942 1736 aaPredicted RBP11.78□□□□□ -0.52
AC004253.2-201ENST00000585025 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms