RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TGFB2P61812 414 aa17.78■□□□□ 0.44
TRAF4-215ENST00000584944 TSPYL6Q8N831 410 aa17.78■□□□□ 0.44
TRAF4-215ENST00000584944 GPBP1L1Q9HC44 474 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-215ENST00000584944 DDX21Q9NR30 783 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRAF4-215ENST00000584944 TBC1D2BQ9UPU7 963 aa17.78■□□□□ 0.44
TRAF4-215ENST00000584944 ZNF652Q9Y2D9 606 aa17.78■□□□□ 0.44
TRAF4-215ENST00000584944 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
TRAF4-215ENST00000584944 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.44
TRAF4-215ENST00000584944 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
TRAF4-215ENST00000584944 KIAA1551Q9HCM1 1747 aa17.77■□□□□ 0.44
TRAF4-215ENST00000584944 C10orf71Q711Q0 1435 aa17.76■□□□□ 0.43
TRAF4-215ENST00000584944 CEP350Q5VT06 3117 aa17.76■□□□□ 0.43
TRAF4-215ENST00000584944 NBPF26B4DH59 902 aa17.76■□□□□ 0.43
TRAF4-215ENST00000584944 NBPF10Q6P3W6 841 aaKnown RBP17.76■□□□□ 0.43
TRAF4-215ENST00000584944 NBPF15Q8N660 670 aa17.76■□□□□ 0.43
TRAF4-215ENST00000584944 NARFQ9UHQ1 456 aa17.76■□□□□ 0.43
TRAF4-215ENST00000584944 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
TRAF4-215ENST00000584944 NPHP1O15259 732 aa17.75■□□□□ 0.43
TRAF4-215ENST00000584944 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
TRAF4-215ENST00000584944 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-215ENST00000584944 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
TRAF4-215ENST00000584944 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
TRAF4-215ENST00000584944 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
TRAF4-215ENST00000584944 ANXA1P04083 346 aa17.74■□□□□ 0.43
TRAF4-215ENST00000584944 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-215ENST00000584944 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
TRAF4-215ENST00000584944 ZNF526Q8TF50 670 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-215ENST00000584944 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
TRAF4-215ENST00000584944 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
TRAF4-215ENST00000584944 VAMP4O75379 141 aa17.73■□□□□ 0.43
TRAF4-215ENST00000584944 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
TRAF4-215ENST00000584944 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
TRAF4-215ENST00000584944 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
TRAF4-215ENST00000584944 DPEP1P16444 411 aa17.72■□□□□ 0.43
TRAF4-215ENST00000584944 PROSER3Q2NL68 480 aa17.72■□□□□ 0.43
TRAF4-215ENST00000584944 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
TRAF4-215ENST00000584944 ZBTB3Q9H5J0 574 aa17.72■□□□□ 0.43
TRAF4-215ENST00000584944 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
TRAF4-215ENST00000584944 PDIA6Q15084 440 aa17.71■□□□□ 0.43
TRAF4-215ENST00000584944 BICDL1Q6ZP65 573 aa17.71■□□□□ 0.43
TRAF4-215ENST00000584944 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
TRAF4-215ENST00000584944 KCNA3P22001 575 aa17.7■□□□□ 0.42
TRAF4-215ENST00000584944 FKBP8Q14318 412 aa17.7■□□□□ 0.42
TRAF4-215ENST00000584944 TRMT2AQ8IZ69 625 aaKnown RBP17.7■□□□□ 0.42
TRAF4-215ENST00000584944 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
TRAF4-215ENST00000584944 MAP3K15Q6ZN16 1313 aa17.7■□□□□ 0.42
TRAF4-215ENST00000584944 BRCA1P38398 1863 aaKnown RBP17.69■□□□□ 0.42
TRAF4-215ENST00000584944 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
TRAF4-215ENST00000584944 FKBP5Q13451 457 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-215ENST00000584944 CLEC4GQ6UXB4 293 aa17.69■□□□□ 0.42
TRAF4-215ENST00000584944 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
TRAF4-215ENST00000584944 ANKRD13DQ6ZTN6 518 aa17.69■□□□□ 0.42
TRAF4-215ENST00000584944 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
TRAF4-215ENST00000584944 KIF3CO14782 793 aa17.68■□□□□ 0.42
TRAF4-215ENST00000584944 CAMTA2O94983 1202 aa17.68■□□□□ 0.42
TRAF4-215ENST00000584944 DDR1Q08345 913 aa17.68■□□□□ 0.42
TRAF4-215ENST00000584944 HSP90AB3PQ58FF7 597 aa17.68■□□□□ 0.42
TRAF4-215ENST00000584944 GTF2E1P29083 439 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-215ENST00000584944 TM4SF1P30408 202 aa17.67■□□□□ 0.42
TRAF4-215ENST00000584944 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
TRAF4-215ENST00000584944 ARHGAP27Q6ZUM4 889 aa17.67■□□□□ 0.42
TRAF4-215ENST00000584944 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
TRAF4-215ENST00000584944 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
TRAF4-215ENST00000584944 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRAF4-215ENST00000584944 RGL2O15211 777 aa17.66■□□□□ 0.42
TRAF4-215ENST00000584944 HSPA6P17066 643 aa17.66■□□□□ 0.42
TRAF4-215ENST00000584944 FLIIQ13045 1269 aa17.66■□□□□ 0.42
TRAF4-215ENST00000584944 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
TRAF4-215ENST00000584944 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
TRAF4-215ENST00000584944 POLRMTO00411 1230 aaKnown RBP17.65■□□□□ 0.42
TRAF4-215ENST00000584944 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
TRAF4-215ENST00000584944 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
TRAF4-215ENST00000584944 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
TRAF4-215ENST00000584944 CARMIL3Q8ND23 1372 aa17.65■□□□□ 0.42
TRAF4-215ENST00000584944 GPTP24298 496 aa17.64■□□□□ 0.41
TRAF4-215ENST00000584944 NFIXQ14938 502 aa17.64■□□□□ 0.41
TRAF4-215ENST00000584944 TBC1D9BQ66K14 1250 aa17.64■□□□□ 0.41
TRAF4-215ENST00000584944 GIGYF2Q6Y7W6 1299 aaKnown RBP17.64■□□□□ 0.41
TRAF4-215ENST00000584944 SSH1Q8WYL5 1049 aa17.64■□□□□ 0.41
TRAF4-215ENST00000584944 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
TRAF4-215ENST00000584944 HLFQ16534 295 aa17.63■□□□□ 0.41
TRAF4-215ENST00000584944 KSR2Q6VAB6 950 aa17.63■□□□□ 0.41
TRAF4-215ENST00000584944 MAP3K2Q9Y2U5 619 aa17.63■□□□□ 0.41
TRAF4-215ENST00000584944 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 ST5P78524 1137 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
TRAF4-215ENST00000584944 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 CNBD1Q8NA66 436 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
TRAF4-215ENST00000584944 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
TRAF4-215ENST00000584944 SERPINB2P05120 415 aa17.61■□□□□ 0.41
TRAF4-215ENST00000584944 CHRNA5P30532 468 aa17.61■□□□□ 0.41
TRAF4-215ENST00000584944 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
TRAF4-215ENST00000584944 G2E3Q7L622 706 aa17.61■□□□□ 0.41
TRAF4-215ENST00000584944 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms