RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 DLEC1Q9Y238 1755 aa23.45■■□□□ 1.34
ERBB2-221ENST00000584888 EIF4A1P60842 406 aaKnown RBP23.45■■□□□ 1.34
ERBB2-221ENST00000584888 LMOD3Q0VAK6 560 aa23.45■■□□□ 1.34
ERBB2-221ENST00000584888 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
ERBB2-221ENST00000584888 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
ERBB2-221ENST00000584888 KDM2BQ8NHM5 1336 aa23.44■■□□□ 1.34
ERBB2-221ENST00000584888 NPHP1O15259 732 aa23.44■■□□□ 1.34
ERBB2-221ENST00000584888 BABAM1Q9NWV8 329 aa23.44■■□□□ 1.34
ERBB2-221ENST00000584888 SBF1O95248 1867 aa23.44■■□□□ 1.34
ERBB2-221ENST00000584888 ANKRD31Q8N7Z5 1873 aa23.43■■□□□ 1.34
ERBB2-221ENST00000584888 LMNB1P20700 586 aa23.43■■□□□ 1.34
ERBB2-221ENST00000584888 PRELPP51888 382 aa23.43■■□□□ 1.34
ERBB2-221ENST00000584888 LAMB4A4D0S4 1761 aa23.42■■□□□ 1.34
ERBB2-221ENST00000584888 ST5P78524 1137 aa23.42■■□□□ 1.34
ERBB2-221ENST00000584888 ZNF652Q9Y2D9 606 aa23.42■■□□□ 1.34
ERBB2-221ENST00000584888 NFKBIEO00221 500 aa23.41■■□□□ 1.34
ERBB2-221ENST00000584888 NEUROD2Q15784 382 aa23.4■■□□□ 1.34
ERBB2-221ENST00000584888 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
ERBB2-221ENST00000584888 C16orf71Q8IYS4 520 aaPredicted RBP23.4■■□□□ 1.34
ERBB2-221ENST00000584888 RRAGCQ9HB90 399 aa23.4■■□□□ 1.34
ERBB2-221ENST00000584888 ZNF219Q9P2Y4 722 aaPredicted RBP23.4■■□□□ 1.34
ERBB2-221ENST00000584888 BCORQ6W2J9 1755 aa23.4■■□□□ 1.34
ERBB2-221ENST00000584888 ZC3H4Q9UPT8 1303 aaKnown RBP23.39■■□□□ 1.34
ERBB2-221ENST00000584888 RGL2O15211 777 aa23.39■■□□□ 1.33
ERBB2-221ENST00000584888 ANP32CO43423 234 aa23.39■■□□□ 1.33
ERBB2-221ENST00000584888 C21orf2O43822 256 aa23.39■■□□□ 1.33
ERBB2-221ENST00000584888 SRGNP10124 158 aa23.39■■□□□ 1.33
ERBB2-221ENST00000584888 CEP350Q5VT06 3117 aa23.38■■□□□ 1.33
ERBB2-221ENST00000584888 CHL1O00533 1208 aa23.38■■□□□ 1.33
ERBB2-221ENST00000584888 STYK1Q6J9G0 422 aa23.38■■□□□ 1.33
ERBB2-221ENST00000584888 RBM46Q8TBY0 533 aaKnown RBP23.38■■□□□ 1.33
ERBB2-221ENST00000584888 CNKSR1Q969H4 720 aa23.38■■□□□ 1.33
ERBB2-221ENST00000584888 TSPYL4Q9UJ04 414 aa23.38■■□□□ 1.33
ERBB2-221ENST00000584888 NIP7Q9Y221 180 aaKnown RBP eCLIP23.38■■□□□ 1.33
ERBB2-221ENST00000584888 APAF1O14727 1248 aa23.36■■□□□ 1.33
ERBB2-221ENST00000584888 APLP1P51693 650 aa23.36■■□□□ 1.33
ERBB2-221ENST00000584888 HLFQ16534 295 aa23.36■■□□□ 1.33
ERBB2-221ENST00000584888 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
ERBB2-221ENST00000584888 MASTLQ96GX5 879 aa23.36■■□□□ 1.33
ERBB2-221ENST00000584888 COL11A2P13942 1736 aaPredicted RBP23.36■■□□□ 1.33
ERBB2-221ENST00000584888 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
ERBB2-221ENST00000584888 GLTPD2A6NH11 291 aa23.34■■□□□ 1.33
ERBB2-221ENST00000584888 PRPF40BQ6NWY9 871 aaKnown RBP23.34■■□□□ 1.33
ERBB2-221ENST00000584888 FAM177BA6PVY3 158 aa23.33■■□□□ 1.33
ERBB2-221ENST00000584888 KLRG2A4D1S0 409 aaPredicted RBP23.32■■□□□ 1.32
ERBB2-221ENST00000584888 FSTL1Q12841 308 aa23.32■■□□□ 1.32
ERBB2-221ENST00000584888 ERVV-1B6SEH8 477 aa23.31■■□□□ 1.32
ERBB2-221ENST00000584888 ZNF853P0CG23 659 aa23.31■■□□□ 1.32
ERBB2-221ENST00000584888 SLX4Q8IY92 1834 aa23.31■■□□□ 1.32
ERBB2-221ENST00000584888 LTBP3Q9NS15 1303 aa23.31■■□□□ 1.32
ERBB2-221ENST00000584888 CCDC88AQ3V6T2 1871 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 MYL6BP14649 208 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 VEGFAP15692 232 aaPredicted RBP23.3■■□□□ 1.32
ERBB2-221ENST00000584888 NPR1P16066 1061 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 ERFEQ4G0M1 354 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 SOGA3Q5TF21 947 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 CFAP44Q96MT7 982 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 TAOK3Q9H2K8 898 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 ERBB4Q15303 1308 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 MAP3K15Q6ZN16 1313 aa23.3■■□□□ 1.32
ERBB2-221ENST00000584888 TNRC6CQ9HCJ0 1690 aaKnown RBP23.29■■□□□ 1.32
ERBB2-221ENST00000584888 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
ERBB2-221ENST00000584888 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
ERBB2-221ENST00000584888 FER1L6Q2WGJ9 1857 aa23.28■■□□□ 1.32
ERBB2-221ENST00000584888 PDIA6Q15084 440 aa23.28■■□□□ 1.32
ERBB2-221ENST00000584888 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
ERBB2-221ENST00000584888 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
ERBB2-221ENST00000584888 LRP10Q7Z4F1 713 aa23.28■■□□□ 1.32
ERBB2-221ENST00000584888 DNAJC5GQ8N7S2 189 aa23.28■■□□□ 1.32
ERBB2-221ENST00000584888 SMC1BQ8NDV3 1235 aa23.27■■□□□ 1.32
ERBB2-221ENST00000584888 KRT24Q2M2I5 525 aa23.26■■□□□ 1.31
ERBB2-221ENST00000584888 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
ERBB2-221ENST00000584888 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
ERBB2-221ENST00000584888 NUP98P52948 1817 aa23.26■■□□□ 1.31
ERBB2-221ENST00000584888 TIAM2Q8IVF5 1701 aa23.25■■□□□ 1.31
ERBB2-221ENST00000584888 NCBP3Q53F19 620 aaKnown RBP23.25■■□□□ 1.31
ERBB2-221ENST00000584888 CCDC93Q567U6 631 aa23.25■■□□□ 1.31
ERBB2-221ENST00000584888 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
ERBB2-221ENST00000584888 POTECB2RU33 542 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 GPTP24298 496 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 NUTM1Q86Y26 1132 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 CACNA1SQ13698 1873 aa23.24■■□□□ 1.31
ERBB2-221ENST00000584888 ARFGEF2Q9Y6D5 1785 aa23.23■■□□□ 1.31
ERBB2-221ENST00000584888 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
ERBB2-221ENST00000584888 HOXB7P09629 217 aa23.22■■□□□ 1.31
ERBB2-221ENST00000584888 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
ERBB2-221ENST00000584888 HTRA3P83110 453 aa23.22■■□□□ 1.31
ERBB2-221ENST00000584888 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
ERBB2-221ENST00000584888 OLFM4Q6UX06 510 aa23.22■■□□□ 1.31
ERBB2-221ENST00000584888 ABCC12Q96J65 1359 aa23.22■■□□□ 1.31
ERBB2-221ENST00000584888 DICER1Q9UPY3 1922 aaKnown RBP23.21■■□□□ 1.31
ERBB2-221ENST00000584888 GNAI1P63096 354 aa23.21■■□□□ 1.31
ERBB2-221ENST00000584888 PROSER3Q2NL68 480 aa23.21■■□□□ 1.31
ERBB2-221ENST00000584888 CRY2Q49AN0 593 aa23.21■■□□□ 1.31
ERBB2-221ENST00000584888 SUSD4Q5VX71 490 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms