RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 H0YIN7 160 aa21.58■■□□□ 1.05
LIMD2-212ENST00000584645 ST5P78524 1137 aa21.58■■□□□ 1.05
LIMD2-212ENST00000584645 C2CD5Q86YS7 1000 aa21.58■■□□□ 1.05
LIMD2-212ENST00000584645 MAP3K15Q6ZN16 1313 aa21.57■■□□□ 1.04
LIMD2-212ENST00000584645 CALD1Q05682 793 aaKnown RBP21.57■■□□□ 1.04
LIMD2-212ENST00000584645 KIF6Q6ZMV9 814 aa21.57■■□□□ 1.04
LIMD2-212ENST00000584645 COL11A2P13942 1736 aaPredicted RBP21.57■■□□□ 1.04
LIMD2-212ENST00000584645 APAF1O14727 1248 aa21.56■■□□□ 1.04
LIMD2-212ENST00000584645 NPHP1O15259 732 aa21.56■■□□□ 1.04
LIMD2-212ENST00000584645 HOXB7P09629 217 aa21.56■■□□□ 1.04
LIMD2-212ENST00000584645 ARHGAP27Q6ZUM4 889 aa21.56■■□□□ 1.04
LIMD2-212ENST00000584645 NBPF5PQ86XG9 351 aaPredicted RBP21.56■■□□□ 1.04
LIMD2-212ENST00000584645 CFAP44Q96MT7 982 aa21.56■■□□□ 1.04
LIMD2-212ENST00000584645 TTLL6Q8N841 843 aa21.55■■□□□ 1.04
LIMD2-212ENST00000584645 NIP7Q9Y221 180 aaKnown RBP eCLIP21.55■■□□□ 1.04
LIMD2-212ENST00000584645 ARFGEF2Q9Y6D5 1785 aa21.54■■□□□ 1.04
LIMD2-212ENST00000584645 MYL6BP14649 208 aa21.54■■□□□ 1.04
LIMD2-212ENST00000584645 LAS1LQ9Y4W2 734 aaKnown RBP21.54■■□□□ 1.04
LIMD2-212ENST00000584645 IBTKQ9P2D0 1353 aaPredicted RBP21.53■■□□□ 1.04
LIMD2-212ENST00000584645 EIF2S2P20042 333 aaKnown RBP21.53■■□□□ 1.04
LIMD2-212ENST00000584645 HLFQ16534 295 aa21.53■■□□□ 1.04
LIMD2-212ENST00000584645 CCDC184Q52MB2 194 aa21.53■■□□□ 1.04
LIMD2-212ENST00000584645 TPTE2Q6XPS3 522 aa21.53■■□□□ 1.04
LIMD2-212ENST00000584645 LRP10Q7Z4F1 713 aa21.53■■□□□ 1.04
LIMD2-212ENST00000584645 NGEFQ8N5V2 710 aa21.53■■□□□ 1.04
LIMD2-212ENST00000584645 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
LIMD2-212ENST00000584645 PDIA6Q15084 440 aa21.52■■□□□ 1.04
LIMD2-212ENST00000584645 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.04
LIMD2-212ENST00000584645 IFT57Q9NWB7 429 aa21.52■■□□□ 1.04
LIMD2-212ENST00000584645 STYK1Q6J9G0 422 aa21.51■■□□□ 1.03
LIMD2-212ENST00000584645 NYXQ9GZU5 481 aa21.51■■□□□ 1.03
LIMD2-212ENST00000584645 MRS2Q9HD23 443 aa21.51■■□□□ 1.03
LIMD2-212ENST00000584645 SBF1O95248 1867 aa21.5■■□□□ 1.03
LIMD2-212ENST00000584645 GNAI1P63096 354 aa21.5■■□□□ 1.03
LIMD2-212ENST00000584645 NCBP3Q53F19 620 aaKnown RBP21.5■■□□□ 1.03
LIMD2-212ENST00000584645 GIGYF2Q6Y7W6 1299 aaKnown RBP21.5■■□□□ 1.03
LIMD2-212ENST00000584645 SRGNP10124 158 aa21.49■■□□□ 1.03
LIMD2-212ENST00000584645 CCDC24Q8N4L8 307 aa21.49■■□□□ 1.03
LIMD2-212ENST00000584645 CNKSR1Q969H4 720 aa21.49■■□□□ 1.03
LIMD2-212ENST00000584645 ZNF622Q969S3 477 aaKnown RBP eCLIP21.49■■□□□ 1.03
LIMD2-212ENST00000584645 MASTLQ96GX5 879 aa21.49■■□□□ 1.03
LIMD2-212ENST00000584645 DDX21Q9NR30 783 aaKnown RBP eCLIP21.49■■□□□ 1.03
LIMD2-212ENST00000584645 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
LIMD2-212ENST00000584645 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
LIMD2-212ENST00000584645 RIC1Q4ADV7 1423 aa21.48■■□□□ 1.03
LIMD2-212ENST00000584645 KLRG2A4D1S0 409 aaPredicted RBP21.48■■□□□ 1.03
LIMD2-212ENST00000584645 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
LIMD2-212ENST00000584645 ZBTB3Q9H5J0 574 aa21.48■■□□□ 1.03
LIMD2-212ENST00000584645 GPBP1L1Q9HC44 474 aaPredicted RBP21.48■■□□□ 1.03
LIMD2-212ENST00000584645 KRT24Q2M2I5 525 aa21.47■■□□□ 1.03
LIMD2-212ENST00000584645 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
LIMD2-212ENST00000584645 ZNF34Q8IZ26 560 aa21.47■■□□□ 1.03
LIMD2-212ENST00000584645 CACNA1SQ13698 1873 aa21.46■■□□□ 1.03
LIMD2-212ENST00000584645 PARP10Q53GL7 1025 aa21.46■■□□□ 1.03
LIMD2-212ENST00000584645 HDGFL1Q5TGJ6 251 aa21.46■■□□□ 1.03
LIMD2-212ENST00000584645 C9orf131Q5VYM1 1079 aa21.46■■□□□ 1.03
LIMD2-212ENST00000584645 NPR1P16066 1061 aa21.45■■□□□ 1.02
LIMD2-212ENST00000584645 GTF2E1P29083 439 aaPredicted RBP21.45■■□□□ 1.02
LIMD2-212ENST00000584645 HSP90AB3PQ58FF7 597 aa21.45■■□□□ 1.02
LIMD2-212ENST00000584645 DUSP27Q5VZP5 1158 aa21.45■■□□□ 1.02
LIMD2-212ENST00000584645 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
LIMD2-212ENST00000584645 UBN2Q6ZU65 1347 aa21.45■■□□□ 1.02
LIMD2-212ENST00000584645 ZC3H4Q9UPT8 1303 aaKnown RBP21.45■■□□□ 1.02
LIMD2-212ENST00000584645 FER1L6Q2WGJ9 1857 aa21.45■■□□□ 1.02
LIMD2-212ENST00000584645 TNRC6CQ9HCJ0 1690 aaKnown RBP21.44■■□□□ 1.02
LIMD2-212ENST00000584645 SLX4Q8IY92 1834 aa21.44■■□□□ 1.02
LIMD2-212ENST00000584645 SOGA3Q5TF21 947 aa21.44■■□□□ 1.02
LIMD2-212ENST00000584645 COPS6Q7L5N1 327 aa21.44■■□□□ 1.02
LIMD2-212ENST00000584645 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
LIMD2-212ENST00000584645 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 ANXA1P04083 346 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 RNF181Q9P0P0 153 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 CHPF2Q9P2E5 772 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
LIMD2-212ENST00000584645 LMNB1P20700 586 aa21.42■■□□□ 1.02
LIMD2-212ENST00000584645 GPTP24298 496 aa21.42■■□□□ 1.02
LIMD2-212ENST00000584645 PRPF40BQ6NWY9 871 aaKnown RBP21.42■■□□□ 1.02
LIMD2-212ENST00000584645 ABCC12Q96J65 1359 aa21.42■■□□□ 1.02
LIMD2-212ENST00000584645 LTBP3Q9NS15 1303 aa21.41■■□□□ 1.02
LIMD2-212ENST00000584645 NTSR2O95665 410 aa21.41■■□□□ 1.02
LIMD2-212ENST00000584645 RASSF7Q02833 373 aa21.41■■□□□ 1.02
LIMD2-212ENST00000584645 CRY2Q49AN0 593 aa21.41■■□□□ 1.02
LIMD2-212ENST00000584645 SUSD4Q5VX71 490 aa21.41■■□□□ 1.02
LIMD2-212ENST00000584645 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
LIMD2-212ENST00000584645 HYPKQ9NX55 129 aa21.41■■□□□ 1.02
LIMD2-212ENST00000584645 IL16Q14005 1332 aa21.4■■□□□ 1.02
LIMD2-212ENST00000584645 NFKBIEO00221 500 aa21.4■■□□□ 1.02
LIMD2-212ENST00000584645 C21orf2O43822 256 aa21.4■■□□□ 1.02
LIMD2-212ENST00000584645 AIMP1Q12904 312 aaKnown RBP21.4■■□□□ 1.02
LIMD2-212ENST00000584645 WWC1Q8IX03 1113 aa21.4■■□□□ 1.02
LIMD2-212ENST00000584645 CCDC88AQ3V6T2 1871 aa21.4■■□□□ 1.02
LIMD2-212ENST00000584645 TIAM2Q8IVF5 1701 aa21.4■■□□□ 1.02
LIMD2-212ENST00000584645 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.02
LIMD2-212ENST00000584645 ALDH1B1P30837 517 aa21.39■■□□□ 1.01
LIMD2-212ENST00000584645 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
LIMD2-212ENST00000584645 NUTM1Q86Y26 1132 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms