RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
CCDC47-206ENST00000584112 MNX1P50219 401 aaPredicted RBP15.19■□□□□ 0.02
CCDC47-206ENST00000584112 MPNDQ8N594 471 aa15.19■□□□□ 0.02
CCDC47-206ENST00000584112 EYA1Q99502 592 aa15.19■□□□□ 0.02
CCDC47-206ENST00000584112 KNSTRNQ9Y448 316 aa15.19■□□□□ 0.02
CCDC47-206ENST00000584112 COL11A2P13942 1736 aaPredicted RBP15.19■□□□□ 0.02
CCDC47-206ENST00000584112 SLX4Q8IY92 1834 aa15.19■□□□□ 0.02
CCDC47-206ENST00000584112 UNC80Q8N2C7 3258 aa15.18■□□□□ 0.02
CCDC47-206ENST00000584112 RANBP2P49792 3224 aaKnown RBP15.18■□□□□ 0.02
CCDC47-206ENST00000584112 NFIXQ14938 502 aa15.18■□□□□ 0.02
CCDC47-206ENST00000584112 BICDL1Q6ZP65 573 aa15.18■□□□□ 0.02
CCDC47-206ENST00000584112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.18■□□□□ 0.022e-12■■□□□ 13.6
CCDC47-206ENST00000584112 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
CCDC47-206ENST00000584112 TRPA1O75762 1119 aa15.17■□□□□ 0.02
CCDC47-206ENST00000584112 CELF2O95319 508 aaKnown RBP15.17■□□□□ 0.02
CCDC47-206ENST00000584112 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
CCDC47-206ENST00000584112 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
CCDC47-206ENST00000584112 USPL1Q5W0Q7 1092 aa15.17■□□□□ 0.02
CCDC47-206ENST00000584112 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
CCDC47-206ENST00000584112 SERPINB2P05120 415 aa15.16■□□□□ 0.02
CCDC47-206ENST00000584112 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
CCDC47-206ENST00000584112 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
CCDC47-206ENST00000584112 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
CCDC47-206ENST00000584112 RNF186Q9NXI6 227 aa15.15■□□□□ 0.02
CCDC47-206ENST00000584112 AKAP11Q9UKA4 1901 aa15.15■□□□□ 0.02
CCDC47-206ENST00000584112 BRCA2P51587 3418 aa15.15■□□□□ 0.02
CCDC47-206ENST00000584112 KIF7Q2M1P5 1343 aa15.15■□□□□ 0.02
CCDC47-206ENST00000584112 NOGQ13253 232 aa15.14■□□□□ 0.01
CCDC47-206ENST00000584112 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
CCDC47-206ENST00000584112 KIAA0100Q14667 2235 aaKnown RBP15.13■□□□□ 0.01
CCDC47-206ENST00000584112 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
CCDC47-206ENST00000584112 CCDC24Q8N4L8 307 aa15.13■□□□□ 0.01
CCDC47-206ENST00000584112 HHIPL1Q96JK4 782 aa15.13■□□□□ 0.01
CCDC47-206ENST00000584112 SAGE1Q9NXZ1 904 aa15.13■□□□□ 0.01
CCDC47-206ENST00000584112 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
CCDC47-206ENST00000584112 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
CCDC47-206ENST00000584112 COL25A1Q9BXS0 654 aaPredicted RBP15.12■□□□□ 0.01
CCDC47-206ENST00000584112 ZNF408Q9H9D4 720 aa15.12■□□□□ 0.01
CCDC47-206ENST00000584112 CENPFP49454 3210 aa15.11■□□□□ 0.01
CCDC47-206ENST00000584112 HTTP42858 3142 aa15.11■□□□□ 0.01
CCDC47-206ENST00000584112 ZPR1O75312 459 aa15.11■□□□□ 0.01
CCDC47-206ENST00000584112 PHKG2P15735 406 aa15.11■□□□□ 0.01
CCDC47-206ENST00000584112 EPS15P42566 896 aa15.11■□□□□ 0.01
CCDC47-206ENST00000584112 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
CCDC47-206ENST00000584112 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
CCDC47-206ENST00000584112 KIF23Q02241 960 aaPredicted RBP15.09■□□□□ 0.01
CCDC47-206ENST00000584112 PLEKHO1Q53GL0 409 aaPredicted RBP15.09■□□□□ 0.01
CCDC47-206ENST00000584112 PRPF40BQ6NWY9 871 aaKnown RBP15.09■□□□□ 0.01
CCDC47-206ENST00000584112 OTUD5Q96G74 571 aa15.09■□□□□ 0.01
CCDC47-206ENST00000584112 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
CCDC47-206ENST00000584112 GJA3Q9Y6H8 435 aa15.09■□□□□ 0.01
CCDC47-206ENST00000584112 FAM155AB1AL88 458 aaPredicted RBP15.08■□□□□ 0
CCDC47-206ENST00000584112 AMOTQ4VCS5 1084 aa15.08■□□□□ 0
CCDC47-206ENST00000584112 GPC2Q8N158 579 aa15.08■□□□□ 0
CCDC47-206ENST00000584112 BCL2L12Q9HB09 334 aa15.08■□□□□ 0
CCDC47-206ENST00000584112 PAPPA2Q9BXP8 1791 aa15.08■□□□□ 0
CCDC47-206ENST00000584112 PTCD1O75127 700 aaKnown RBP15.07■□□□□ 0
CCDC47-206ENST00000584112 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
CCDC47-206ENST00000584112 INTS5Q6P9B9 1019 aaKnown RBP15.07■□□□□ 0
CCDC47-206ENST00000584112 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
CCDC47-206ENST00000584112 FZD9O00144 591 aa15.06■□□□□ 0
CCDC47-206ENST00000584112 OLFM4Q6UX06 510 aa15.06■□□□□ 0
CCDC47-206ENST00000584112 TJP1Q07157 1748 aa15.06■□□□□ 0
CCDC47-206ENST00000584112 VCANP13611 3396 aa15.05■□□□□ -0
CCDC47-206ENST00000584112 PER1O15534 1290 aaPredicted RBP15.05■□□□□ -0
CCDC47-206ENST00000584112 LMOD1P29536 600 aaPredicted RBP15.05■□□□□ -0
CCDC47-206ENST00000584112 SCNN1DP51172 638 aa15.05■□□□□ -0
CCDC47-206ENST00000584112 HUNKP57058 714 aa15.05■□□□□ -0
CCDC47-206ENST00000584112 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ -0
CCDC47-206ENST00000584112 HDAC9Q9UKV0 1011 aa15.05■□□□□ -0
CCDC47-206ENST00000584112 NPC1L1Q9UHC9 1359 aa15.05■□□□□ -0
CCDC47-206ENST00000584112 ARFGEF2Q9Y6D5 1785 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 H0YGN5 161 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 KCNA4P22459 653 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 IL13P35225 146 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
CCDC47-206ENST00000584112 MTHFSP49914 203 aa15.03■□□□□ -0
CCDC47-206ENST00000584112 FKBP4Q02790 459 aaKnown RBP eCLIP15.03■□□□□ -0
CCDC47-206ENST00000584112 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
CCDC47-206ENST00000584112 DLK2Q6UY11 383 aa15.03■□□□□ -0
CCDC47-206ENST00000584112 BCORQ6W2J9 1755 aa15.03■□□□□ -0
CCDC47-206ENST00000584112 PDE6BP35913 854 aa15.02■□□□□ -0
CCDC47-206ENST00000584112 SOGA3Q5TF21 947 aa15.02■□□□□ -0
CCDC47-206ENST00000584112 FBXO46Q6PJ61 603 aaPredicted RBP15.02■□□□□ -0
CCDC47-206ENST00000584112 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
CCDC47-206ENST00000584112 ZNF296Q8WUU4 475 aaPredicted RBP15.02■□□□□ -0
CCDC47-206ENST00000584112 C7orf43Q8WVR3 580 aa15.02■□□□□ -0
CCDC47-206ENST00000584112 CNKSR1Q969H4 720 aa15.02■□□□□ -0
CCDC47-206ENST00000584112 BRIP1Q9BX63 1249 aa15.02■□□□□ -0
CCDC47-206ENST00000584112 RBM27Q9P2N5 1060 aaKnown RBP15.02■□□□□ -0
CCDC47-206ENST00000584112 COL4A5P29400 1685 aa15.02□□□□□ -0.01
CCDC47-206ENST00000584112 SOS1Q07889 1333 aaPredicted RBP15.01□□□□□ -0.01
CCDC47-206ENST00000584112 CABP4P57796 275 aa15.01□□□□□ -0.01
CCDC47-206ENST00000584112 CCDC93Q567U6 631 aa15.01□□□□□ -0.01
CCDC47-206ENST00000584112 CSRNP1Q96S65 589 aa15.01□□□□□ -0.01
CCDC47-206ENST00000584112 NARFQ9UHQ1 456 aa15.01□□□□□ -0.01
CCDC47-206ENST00000584112 EN2P19622 333 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms