RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 PARP10Q53GL7 1025 aa11.87□□□□□ -0.51
UBBP4-201ENST00000583708 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.87□□□□□ -0.51
UBBP4-201ENST00000583708 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
UBBP4-201ENST00000583708 API5Q9BZZ5 524 aaKnown RBP11.87□□□□□ -0.51
UBBP4-201ENST00000583708 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 PHF14O94880 888 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 GYS1P13807 737 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 TCIRG1Q13488 830 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 RCAN3Q9UKA8 241 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
UBBP4-201ENST00000583708 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
UBBP4-201ENST00000583708 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 POLD1P28340 1107 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 TM4SF1P30408 202 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 FKBP5Q13451 457 aaPredicted RBP11.85□□□□□ -0.51
UBBP4-201ENST00000583708 USPL1Q5W0Q7 1092 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 ARXQ96QS3 562 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 SETDB2Q96T68 719 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 SPON1Q9HCB6 807 aa11.85□□□□□ -0.51
UBBP4-201ENST00000583708 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
UBBP4-201ENST00000583708 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 DNAAF4Q8WXU2 420 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
UBBP4-201ENST00000583708 NYXQ9GZU5 481 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
UBBP4-201ENST00000583708 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 HDAC5Q9UQL6 1122 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
UBBP4-201ENST00000583708 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 ANXA1P04083 346 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 ZKSCAN2Q63HK3 967 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 ZNF34Q8IZ26 560 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
UBBP4-201ENST00000583708 ALDH1L1O75891 902 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
UBBP4-201ENST00000583708 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
UBBP4-201ENST00000583708 FKBP8Q14318 412 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 G2E3Q7L622 706 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 CHMP4BQ9H444 224 aaKnown RBP11.82□□□□□ -0.52
UBBP4-201ENST00000583708 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 SRP68Q9UHB9 627 aaKnown RBP11.82□□□□□ -0.52
UBBP4-201ENST00000583708 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
UBBP4-201ENST00000583708 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 PARP3Q9Y6F1 533 aa11.82□□□□□ -0.52
UBBP4-201ENST00000583708 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
UBBP4-201ENST00000583708 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
UBBP4-201ENST00000583708 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
UBBP4-201ENST00000583708 NFIXQ14938 502 aa11.81□□□□□ -0.52
UBBP4-201ENST00000583708 HLFQ16534 295 aa11.81□□□□□ -0.52
UBBP4-201ENST00000583708 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
UBBP4-201ENST00000583708 TCERG1O14776 1098 aaKnown RBP11.8□□□□□ -0.52
UBBP4-201ENST00000583708 BCAR3O75815 825 aa11.8□□□□□ -0.52
UBBP4-201ENST00000583708 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
UBBP4-201ENST00000583708 SERPINB2P05120 415 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
UBBP4-201ENST00000583708 MMP10P09238 476 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 BEND3Q5T5X7 828 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
UBBP4-201ENST00000583708 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
UBBP4-201ENST00000583708 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 ADCY9O60503 1353 aa11.79□□□□□ -0.52
UBBP4-201ENST00000583708 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
UBBP4-201ENST00000583708 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
UBBP4-201ENST00000583708 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
UBBP4-201ENST00000583708 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
UBBP4-201ENST00000583708 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
UBBP4-201ENST00000583708 ZBTB38Q8NAP3 1195 aaPredicted RBP11.78□□□□□ -0.52
UBBP4-201ENST00000583708 MYD88Q99836 296 aa11.78□□□□□ -0.52
UBBP4-201ENST00000583708 BCL2L13Q9BXK5 485 aa11.78□□□□□ -0.52
UBBP4-201ENST00000583708 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 PCCAP05165 728 aaPredicted RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 PTGER2P43116 358 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 ST5P78524 1137 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 GCKRQ14397 625 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 CNBD1Q8NA66 436 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 FRAT1Q92837 279 aaPredicted RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 PDGFDQ9GZP0 370 aaPredicted RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.53
UBBP4-201ENST00000583708 ABCC4O15439 1325 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms