RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 STAP2Q9UGK3 403 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 TAF6LQ9Y6J9 622 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 MST1RQ04912 1400 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 ST18O60284 1047 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 PRPF40AO75400 957 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 TCEANC2Q96MN5 208 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 GBP4Q96PP9 640 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 SASH1O94885 1247 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 SLC52A2Q9HAB3 445 aa13.03□□□□□ -0.32
CDK5RAP3-225ENST00000582482 LARGE1O95461 756 aa13.02□□□□□ -0.32
CDK5RAP3-225ENST00000582482 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-225ENST00000582482 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-225ENST00000582482 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-225ENST00000582482 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
CDK5RAP3-225ENST00000582482 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
CDK5RAP3-225ENST00000582482 BOLA2Q9H3K6 86 aa13.02□□□□□ -0.33
CDK5RAP3-225ENST00000582482 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
CDK5RAP3-225ENST00000582482 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
CDK5RAP3-225ENST00000582482 GRM8O00222 908 aa13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-225ENST00000582482 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 SNX14Q9Y5W7 946 aa13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 LSG1Q9H089 658 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ALS2Q96Q42 1657 aa13□□□□□ -0.33
CDK5RAP3-225ENST00000582482 SGSM2O43147 1006 aa12.99□□□□□ -0.33
CDK5RAP3-225ENST00000582482 PRPF40BQ6NWY9 871 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-225ENST00000582482 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
CDK5RAP3-225ENST00000582482 IFIT2P09913 472 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-225ENST00000582482 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 A1BGP04217 495 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 HOXB7P09629 217 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 PHRF1Q9P1Y6 1649 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 HYPKQ9NX55 129 aa12.98□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 A0A0D9SFI3 127 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 HSPA4P34932 840 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 AK2P54819 239 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 LRP10Q7Z4F1 713 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ZBTB3Q9H5J0 574 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 KAT6BQ8WYB5 2073 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 GADD45BO75293 160 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CASTP20810 708 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CABP4P57796 275 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 GCKRQ14397 625 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 RUFY3Q7L099 469 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 NECAB1Q8N987 351 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
CDK5RAP3-225ENST00000582482 ZNF589Q86UQ0 364 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-225ENST00000582482 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
CDK5RAP3-225ENST00000582482 RAD50Q92878 1312 aa12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 PPFIA3O75145 1194 aa12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 TFCP2Q12800 502 aa12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.34
CDK5RAP3-225ENST00000582482 COL18A1P39060 1754 aa12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 MCCP23508 829 aa12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 G3BP1Q13283 466 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 TMEM63CQ9P1W3 806 aa12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 TCHHQ07283 1943 aa12.95□□□□□ -0.34
CDK5RAP3-225ENST00000582482 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms