RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-222ENST00000581708 NPHP1O15259 732 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 HOXB7P09629 217 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 KIF6Q6ZMV9 814 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 ATP10DQ9P241 1426 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
CDK5RAP3-222ENST00000581708 ANP32CO43423 234 aa16.43■□□□□ 0.22
CDK5RAP3-222ENST00000581708 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-222ENST00000581708 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-222ENST00000581708 ANKRD31Q8N7Z5 1873 aa16.42■□□□□ 0.22
CDK5RAP3-222ENST00000581708 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDK5RAP3-222ENST00000581708 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 KLRG2A4D1S0 409 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 APAF1O14727 1248 aa16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 CNKSR1Q969H4 720 aa16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 NYXQ9GZU5 481 aa16.41■□□□□ 0.22
CDK5RAP3-222ENST00000581708 MYL6BP14649 208 aa16.4■□□□□ 0.22
CDK5RAP3-222ENST00000581708 HLFQ16534 295 aa16.4■□□□□ 0.22
CDK5RAP3-222ENST00000581708 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
CDK5RAP3-222ENST00000581708 GPBP1L1Q9HC44 474 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-222ENST00000581708 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
CDK5RAP3-222ENST00000581708 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-222ENST00000581708 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 SRGNP10124 158 aa16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 GNAI1P63096 354 aa16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 PDIA6Q15084 440 aa16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 GIGYF2Q6Y7W6 1299 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 NUP98P52948 1817 aa16.39■□□□□ 0.21
CDK5RAP3-222ENST00000581708 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 EIF2S2P20042 333 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 TTLL7Q6ZT98 887 aa16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-222ENST00000581708 NPR1P16066 1061 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 C1QTNF8P60827 252 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 PARP10Q53GL7 1025 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.216e-13■■□□□ 12.3
CDK5RAP3-222ENST00000581708 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
CDK5RAP3-222ENST00000581708 LMNB1P20700 586 aa16.36■□□□□ 0.21
CDK5RAP3-222ENST00000581708 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
CDK5RAP3-222ENST00000581708 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-222ENST00000581708 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-222ENST00000581708 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
CDK5RAP3-222ENST00000581708 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
CDK5RAP3-222ENST00000581708 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
CDK5RAP3-222ENST00000581708 ZBTB3Q9H5J0 574 aa16.35■□□□□ 0.21
CDK5RAP3-222ENST00000581708 MBIPQ9NS73 344 aa16.35■□□□□ 0.21
CDK5RAP3-222ENST00000581708 LTBP3Q9NS15 1303 aa16.35■□□□□ 0.21
CDK5RAP3-222ENST00000581708 SBF1O95248 1867 aa16.35■□□□□ 0.21
CDK5RAP3-222ENST00000581708 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
CDK5RAP3-222ENST00000581708 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
CDK5RAP3-222ENST00000581708 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
CDK5RAP3-222ENST00000581708 PRPF40BQ6NWY9 871 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-222ENST00000581708 IL16Q14005 1332 aa16.32■□□□□ 0.2
CDK5RAP3-222ENST00000581708 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
CDK5RAP3-222ENST00000581708 KDM2BQ8NHM5 1336 aa16.32■□□□□ 0.2
CDK5RAP3-222ENST00000581708 XAGE3Q8WTP9 111 aa16.32■□□□□ 0.2
CDK5RAP3-222ENST00000581708 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 NFKBIEO00221 500 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 C21orf2O43822 256 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 NTSR2O95665 410 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 CHPF2Q9P2E5 772 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 SLX4Q8IY92 1834 aa16.31■□□□□ 0.2
CDK5RAP3-222ENST00000581708 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 GPTP24298 496 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 ZNF526Q8TF50 670 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 UTP14AQ9BVJ6 771 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
CDK5RAP3-222ENST00000581708 ANXA1P04083 346 aa16.29■□□□□ 0.2
CDK5RAP3-222ENST00000581708 RASSF7Q02833 373 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms