RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 CCDC27Q2M243 656 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 ZBTB3Q9H5J0 574 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 KIAA1551Q9HCM1 1747 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 SCN7AQ01118 1682 aa17.71■□□□□ 0.43
CUEDC1-209ENST00000581391 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
CUEDC1-209ENST00000581391 MIER1Q8N108 512 aa17.71■□□□□ 0.43
CUEDC1-209ENST00000581391 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
CUEDC1-209ENST00000581391 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
CUEDC1-209ENST00000581391 CHPF2Q9P2E5 772 aa17.71■□□□□ 0.43
CUEDC1-209ENST00000581391 TGFB2P61812 414 aa17.7■□□□□ 0.42
CUEDC1-209ENST00000581391 HDGFL1Q5TGJ6 251 aa17.7■□□□□ 0.42
CUEDC1-209ENST00000581391 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
CUEDC1-209ENST00000581391 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
CUEDC1-209ENST00000581391 BCORQ6W2J9 1755 aa17.7■□□□□ 0.42
CUEDC1-209ENST00000581391 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 NIP7Q9Y221 180 aaKnown RBP eCLIP17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
CUEDC1-209ENST00000581391 GPTP24298 496 aa17.68■□□□□ 0.42
CUEDC1-209ENST00000581391 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
CUEDC1-209ENST00000581391 NRXN2Q9P2S2 1712 aa17.68■□□□□ 0.42
CUEDC1-209ENST00000581391 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
CUEDC1-209ENST00000581391 NUP98P52948 1817 aa17.68■□□□□ 0.42
CUEDC1-209ENST00000581391 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
CUEDC1-209ENST00000581391 DDX21Q9NR30 783 aaKnown RBP eCLIP17.67■□□□□ 0.42
CUEDC1-209ENST00000581391 ERBB4Q15303 1308 aa17.67■□□□□ 0.42
CUEDC1-209ENST00000581391 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
CUEDC1-209ENST00000581391 YY1P25490 414 aa17.66■□□□□ 0.42
CUEDC1-209ENST00000581391 ZNF652Q9Y2D9 606 aa17.66■□□□□ 0.42
CUEDC1-209ENST00000581391 ANKRD31Q8N7Z5 1873 aa17.65■□□□□ 0.42
CUEDC1-209ENST00000581391 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
CUEDC1-209ENST00000581391 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
CUEDC1-209ENST00000581391 CCER2I3L3R5 266 aa17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 HOXB7P09629 217 aa17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 NUTM1Q86Y26 1132 aa17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 CNBD1Q8NA66 436 aa17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
CUEDC1-209ENST00000581391 NPHP1O15259 732 aa17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 GIGYF2Q6Y7W6 1299 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 BRCA1P38398 1863 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-209ENST00000581391 BRIP1Q9BX63 1249 aa17.62■□□□□ 0.41
CUEDC1-209ENST00000581391 IL16Q14005 1332 aa17.62■□□□□ 0.41
CUEDC1-209ENST00000581391 CHD4Q14839 1912 aa17.62■□□□□ 0.41
CUEDC1-209ENST00000581391 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
CUEDC1-209ENST00000581391 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
CUEDC1-209ENST00000581391 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
CUEDC1-209ENST00000581391 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
CUEDC1-209ENST00000581391 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
CUEDC1-209ENST00000581391 H0YIN7 160 aa17.6■□□□□ 0.41
CUEDC1-209ENST00000581391 ST5P78524 1137 aa17.6■□□□□ 0.41
CUEDC1-209ENST00000581391 TWISTNBQ3B726 338 aaPredicted RBP17.6■□□□□ 0.41
CUEDC1-209ENST00000581391 ARHGAP27Q6ZUM4 889 aa17.6■□□□□ 0.41
CUEDC1-209ENST00000581391 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
CUEDC1-209ENST00000581391 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
CUEDC1-209ENST00000581391 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
CUEDC1-209ENST00000581391 RGL2O15211 777 aa17.59■□□□□ 0.41
CUEDC1-209ENST00000581391 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
CUEDC1-209ENST00000581391 G2E3Q7L622 706 aa17.59■□□□□ 0.41
CUEDC1-209ENST00000581391 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
CUEDC1-209ENST00000581391 ATP10DQ9P241 1426 aa17.58■□□□□ 0.41
CUEDC1-209ENST00000581391 ABCC12Q96J65 1359 aa17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 VAMP4O75379 141 aa17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 PDE6BP35913 854 aa17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 TCIRG1Q13488 830 aa17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.4
CUEDC1-209ENST00000581391 NTSR2O95665 410 aa17.57■□□□□ 0.4
CUEDC1-209ENST00000581391 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
CUEDC1-209ENST00000581391 CCDC30Q5VVM6 783 aa17.57■□□□□ 0.4
CUEDC1-209ENST00000581391 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
CUEDC1-209ENST00000581391 PLBD2Q8NHP8 589 aa17.57■□□□□ 0.4
CUEDC1-209ENST00000581391 CDCA7LQ96GN5 454 aa17.57■□□□□ 0.4
CUEDC1-209ENST00000581391 SRGNP10124 158 aa17.56■□□□□ 0.4
CUEDC1-209ENST00000581391 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
CUEDC1-209ENST00000581391 TTLL6Q8N841 843 aa17.56■□□□□ 0.4
CUEDC1-209ENST00000581391 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
CUEDC1-209ENST00000581391 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 RIC3Q7Z5B4 369 aa17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 JARID2Q92833 1246 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
CUEDC1-209ENST00000581391 TNRC6CQ9HCJ0 1690 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms