RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 TRIM35Q9UPQ4 493 aa9.46□□□□□ -0.9
SNX11-208ENST00000581298 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
SNX11-208ENST00000581298 TBC1D9BQ66K14 1250 aa9.45□□□□□ -0.9
SNX11-208ENST00000581298 LRP10Q7Z4F1 713 aa9.45□□□□□ -0.9
SNX11-208ENST00000581298 PIM2Q9P1W9 311 aa9.45□□□□□ -0.9
SNX11-208ENST00000581298 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
SNX11-208ENST00000581298 KLRG2A4D1S0 409 aaPredicted RBP9.44□□□□□ -0.9
SNX11-208ENST00000581298 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
SNX11-208ENST00000581298 ERVV-1B6SEH8 477 aa9.44□□□□□ -0.9
SNX11-208ENST00000581298 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
SNX11-208ENST00000581298 THUMPD2Q9BTF0 503 aaKnown RBP9.44□□□□□ -0.9
SNX11-208ENST00000581298 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
SNX11-208ENST00000581298 MIS18AQ9NYP9 233 aa9.44□□□□□ -0.9
SNX11-208ENST00000581298 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
SNX11-208ENST00000581298 BRCA1P38398 1863 aaKnown RBP9.44□□□□□ -0.9
SNX11-208ENST00000581298 CARMIL3Q8ND23 1372 aa9.43□□□□□ -0.9
SNX11-208ENST00000581298 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
SNX11-208ENST00000581298 PDIA6Q15084 440 aa9.43□□□□□ -0.9
SNX11-208ENST00000581298 PRR5LQ6MZQ0 368 aa9.43□□□□□ -0.9
SNX11-208ENST00000581298 SCN7AQ01118 1682 aa9.42□□□□□ -0.9
SNX11-208ENST00000581298 HOXB7P09629 217 aa9.42□□□□□ -0.9
SNX11-208ENST00000581298 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX11-208ENST00000581298 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
SNX11-208ENST00000581298 SETDB2Q96T68 719 aa9.42□□□□□ -0.9
SNX11-208ENST00000581298 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
SNX11-208ENST00000581298 PDE4DIPQ5VU43 2346 aa9.41□□□□□ -0.9
SNX11-208ENST00000581298 CHRNA5P30532 468 aa9.41□□□□□ -0.9
SNX11-208ENST00000581298 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
SNX11-208ENST00000581298 TSPYL4Q9UJ04 414 aa9.41□□□□□ -0.9
SNX11-208ENST00000581298 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
SNX11-208ENST00000581298 ZNF652Q9Y2D9 606 aa9.41□□□□□ -0.9
SNX11-208ENST00000581298 ARFGEF1Q9Y6D6 1849 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 BCORQ6W2J9 1755 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 IBTKQ9P2D0 1353 aaPredicted RBP9.4□□□□□ -0.9
SNX11-208ENST00000581298 MAP3K15Q6ZN16 1313 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 PDE6BP35913 854 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 CCDC27Q2M243 656 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 NPM2Q86SE8 214 aaKnown RBP9.4□□□□□ -0.9
SNX11-208ENST00000581298 TTLL6Q8N841 843 aa9.4□□□□□ -0.9
SNX11-208ENST00000581298 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.91
SNX11-208ENST00000581298 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
SNX11-208ENST00000581298 H0YIN7 160 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
SNX11-208ENST00000581298 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
SNX11-208ENST00000581298 SRGNP10124 158 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 PIP4K2AP48426 406 aaPredicted RBP9.39□□□□□ -0.91
SNX11-208ENST00000581298 HLFQ16534 295 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 STYK1Q6J9G0 422 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
SNX11-208ENST00000581298 CCDC146Q8IYE0 955 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 ZNF34Q8IZ26 560 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 LAMB4A4D0S4 1761 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
SNX11-208ENST00000581298 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
SNX11-208ENST00000581298 APAF1O14727 1248 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 HTRA3P83110 453 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 TTLL7Q6ZT98 887 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 C2CD5Q86YS7 1000 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 DDX21Q9NR30 783 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNX11-208ENST00000581298 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
SNX11-208ENST00000581298 NIP7Q9Y221 180 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNX11-208ENST00000581298 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
SNX11-208ENST00000581298 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 KCNA4P22459 653 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 ST5P78524 1137 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
SNX11-208ENST00000581298 CRY2Q49AN0 593 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 SLC10A5Q5PT55 438 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 ARHGAP27Q6ZUM4 889 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
SNX11-208ENST00000581298 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
SNX11-208ENST00000581298 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
SNX11-208ENST00000581298 RNF123Q5XPI4 1314 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 NFKBIEO00221 500 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 GNAI1P63096 354 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 PARP10Q53GL7 1025 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 NBPF5PQ86XG9 351 aaPredicted RBP9.36□□□□□ -0.91
SNX11-208ENST00000581298 NYXQ9GZU5 481 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
SNX11-208ENST00000581298 IL16Q14005 1332 aa9.35□□□□□ -0.91
SNX11-208ENST00000581298 UBN2Q6ZU65 1347 aa9.35□□□□□ -0.91
SNX11-208ENST00000581298 NTSR2O95665 410 aa9.35□□□□□ -0.91
SNX11-208ENST00000581298 NPR1P16066 1061 aa9.35□□□□□ -0.91
SNX11-208ENST00000581298 HOXA10P31260 410 aaPredicted RBP9.35□□□□□ -0.91
SNX11-208ENST00000581298 FSTL1Q12841 308 aa9.35□□□□□ -0.91
SNX11-208ENST00000581298 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
SNX11-208ENST00000581298 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
SNX11-208ENST00000581298 C9orf131Q5VYM1 1079 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms