RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 PGBD3Q8N328 593 aa11.94□□□□□ -0.5
TRAPPC8-208ENST00000581057 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
TRAPPC8-208ENST00000581057 HSH2DQ96JZ2 352 aa11.94□□□□□ -0.5
TRAPPC8-208ENST00000581057 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
TRAPPC8-208ENST00000581057 EGFL7Q9UHF1 273 aa11.94□□□□□ -0.5
TRAPPC8-208ENST00000581057 GJA3Q9Y6H8 435 aa11.94□□□□□ -0.5
TRAPPC8-208ENST00000581057 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
TRAPPC8-208ENST00000581057 ZIC5Q96T25 663 aa11.93□□□□□ -0.5
TRAPPC8-208ENST00000581057 STIM2Q9P246 746 aa11.93□□□□□ -0.5
TRAPPC8-208ENST00000581057 A0A1W2PNR3 127 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 SLC35F4A4IF30 521 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 TNFRSF10BO14763 440 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 MPSTP25325 297 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 IFT43Q96FT9 208 aa11.92□□□□□ -0.5
TRAPPC8-208ENST00000581057 AAMPQ13685 434 aa11.91□□□□□ -0.5
TRAPPC8-208ENST00000581057 ZNF280CQ8ND82 737 aa11.91□□□□□ -0.5
TRAPPC8-208ENST00000581057 C7orf43Q8WVR3 580 aa11.91□□□□□ -0.5
TRAPPC8-208ENST00000581057 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
TRAPPC8-208ENST00000581057 SND1Q7KZF4 910 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAPPC8-208ENST00000581057 FAM26DQ5JW98 314 aa11.89□□□□□ -0.51
TRAPPC8-208ENST00000581057 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
TRAPPC8-208ENST00000581057 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
TRAPPC8-208ENST00000581057 FAM13AO94988 1023 aa11.88□□□□□ -0.51
TRAPPC8-208ENST00000581057 HIF1AQ16665 826 aa11.88□□□□□ -0.51
TRAPPC8-208ENST00000581057 EFHC2Q5JST6 749 aa11.88□□□□□ -0.51
TRAPPC8-208ENST00000581057 CRISPLD1Q9H336 500 aa11.88□□□□□ -0.51
TRAPPC8-208ENST00000581057 BCS1LQ9Y276 419 aa11.88□□□□□ -0.51
TRAPPC8-208ENST00000581057 NOM1Q5C9Z4 860 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-208ENST00000581057 TREML1Q86YW5 311 aa11.87□□□□□ -0.51
TRAPPC8-208ENST00000581057 ETFBKMTQ8IXQ9 262 aa11.87□□□□□ -0.51
TRAPPC8-208ENST00000581057 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
TRAPPC8-208ENST00000581057 GPC6Q9Y625 555 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC8-208ENST00000581057 ZBTB39O15060 712 aa11.86□□□□□ -0.51
TRAPPC8-208ENST00000581057 CUEDC1Q9NWM3 386 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-208ENST00000581057 TGFBR3LH3BV60 316 aa11.85□□□□□ -0.51
TRAPPC8-208ENST00000581057 EIF1AXP47813 144 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-208ENST00000581057 ATCAYQ86WG3 371 aa11.85□□□□□ -0.51
TRAPPC8-208ENST00000581057 NUCKS1Q9H1E3 243 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-208ENST00000581057 H7C1W4 665 aa11.84□□□□□ -0.51
TRAPPC8-208ENST00000581057 ITGA6P23229 1130 aa11.84□□□□□ -0.51
TRAPPC8-208ENST00000581057 DBN1Q16643 649 aa11.84□□□□□ -0.51
TRAPPC8-208ENST00000581057 CDC14CA4D256 554 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 MICAL2O94851 1124 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 ZAP70P43403 619 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 ECM1Q16610 540 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
TRAPPC8-208ENST00000581057 NPR3P17342 541 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 IDH3AP50213 366 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 ARHGAP4P98171 946 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 CCDC27Q2M243 656 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 ALKBH2Q6NS38 261 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 BTLAQ7Z6A9 289 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 NLRP8Q86W28 1048 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 TRIM22Q8IYM9 498 aa11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 ZCCHC2Q9C0B9 1178 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-208ENST00000581057 THBS1P07996 1170 aa11.81□□□□□ -0.52
TRAPPC8-208ENST00000581057 VEGFBP49765 207 aa11.81□□□□□ -0.52
TRAPPC8-208ENST00000581057 USP20Q9Y2K6 914 aa11.81□□□□□ -0.52
TRAPPC8-208ENST00000581057 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-208ENST00000581057 IER5Q5VY09 327 aa11.8□□□□□ -0.52
TRAPPC8-208ENST00000581057 GPR152Q8TDT2 470 aa11.8□□□□□ -0.52
TRAPPC8-208ENST00000581057 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-208ENST00000581057 DCDC2BA2VCK2 349 aa11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 ATXN7O15265 892 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 MAPK1P28482 360 aa11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 LBRQ14739 615 aaKnown RBP11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 RGL4Q8IZJ4 473 aa11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 EDEM1Q92611 657 aa11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 GTPBP3Q969Y2 492 aaKnown RBP11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 ZNF837Q96EG3 531 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 BRPF3Q9ULD4 1205 aa11.79□□□□□ -0.52
TRAPPC8-208ENST00000581057 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-208ENST00000581057 MARSP56192 900 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-208ENST00000581057 FIGNL1Q6PIW4 674 aa11.78□□□□□ -0.52
TRAPPC8-208ENST00000581057 VWA5B2Q8N398 1253 aa11.78□□□□□ -0.52
TRAPPC8-208ENST00000581057 ARSDP51689 593 aa11.77□□□□□ -0.53
TRAPPC8-208ENST00000581057 TYRO3Q06418 890 aa11.77□□□□□ -0.53
TRAPPC8-208ENST00000581057 BRD7Q9NPI1 651 aa11.77□□□□□ -0.53
TRAPPC8-208ENST00000581057 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-208ENST00000581057 PCDHGC4Q9Y5F7 938 aa11.77□□□□□ -0.53
TRAPPC8-208ENST00000581057 GPR25O00155 361 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 OPLAHO14841 1288 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 NDUFB5O43674 189 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 FZD6O60353 706 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 CMTR1Q8N1G2 835 aaKnown RBP11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 FAM13BQ9NYF5 915 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 POLIQ9UNA4 740 aa11.76□□□□□ -0.53
TRAPPC8-208ENST00000581057 INPP5BP32019 993 aa11.75□□□□□ -0.53
TRAPPC8-208ENST00000581057 SAMD5Q5TGI4 173 aa11.75□□□□□ -0.53
TRAPPC8-208ENST00000581057 TMC1Q8TDI8 760 aa11.75□□□□□ -0.53
TRAPPC8-208ENST00000581057 DCTN4Q9UJW0 460 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms