RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 MAP7D1Q3KQU3 841 aa7.82□□□□□ -1.16
SMG8-205ENST00000580798 NBPF11Q86T75 865 aa7.82□□□□□ -1.16
SMG8-205ENST00000580798 NACC1Q96RE7 527 aa7.82□□□□□ -1.16
SMG8-205ENST00000580798 NID1P14543 1247 aa7.81□□□□□ -1.16
SMG8-205ENST00000580798 MICALL1Q8N3F8 863 aa7.81□□□□□ -1.16
SMG8-205ENST00000580798 TNFRSF25Q93038 417 aa7.81□□□□□ -1.16
SMG8-205ENST00000580798 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
SMG8-205ENST00000580798 VAC14Q08AM6 782 aa7.8□□□□□ -1.16
SMG8-205ENST00000580798 LRRC69Q6ZNQ3 347 aa7.8□□□□□ -1.16
SMG8-205ENST00000580798 ZDHHC1Q8WTX9 485 aa7.8□□□□□ -1.16
SMG8-205ENST00000580798 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
SMG8-205ENST00000580798 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
SMG8-205ENST00000580798 H2AFB2P0C5Z0 115 aa7.78□□□□□ -1.16
SMG8-205ENST00000580798 LRP8Q14114 963 aa7.78□□□□□ -1.16
SMG8-205ENST00000580798 PCDHGA11Q9Y5H2 935 aa7.78□□□□□ -1.16
SMG8-205ENST00000580798 EML1O00423 815 aa7.77□□□□□ -1.17
SMG8-205ENST00000580798 ADH7P40394 386 aa7.77□□□□□ -1.17
SMG8-205ENST00000580798 ADGRE1Q14246 886 aa7.77□□□□□ -1.17
SMG8-205ENST00000580798 C20orf204Q6ZNR8 217 aa7.77□□□□□ -1.17
SMG8-205ENST00000580798 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
SMG8-205ENST00000580798 L3MBTL2Q969R5 705 aa7.77□□□□□ -1.17
SMG8-205ENST00000580798 SCHIP1Q9P0W5 487 aaPredicted RBP7.77□□□□□ -1.17
SMG8-205ENST00000580798 C9orf172C9J069 976 aa7.76□□□□□ -1.17
SMG8-205ENST00000580798 SELPP16109 830 aa7.76□□□□□ -1.17
SMG8-205ENST00000580798 MBTPS1Q14703 1052 aa7.76□□□□□ -1.17
SMG8-205ENST00000580798 RAB44Q7Z6P3 723 aaPredicted RBP7.76□□□□□ -1.17
SMG8-205ENST00000580798 PRM3Q9NNZ6 103 aa7.76□□□□□ -1.17
SMG8-205ENST00000580798 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
SMG8-205ENST00000580798 NOS2P35228 1153 aa7.75□□□□□ -1.17
SMG8-205ENST00000580798 SPEM2Q0P670 501 aa7.75□□□□□ -1.17
SMG8-205ENST00000580798 TEAD4Q15561 434 aa7.75□□□□□ -1.17
SMG8-205ENST00000580798 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
SMG8-205ENST00000580798 KRTAP9-9Q9BYP9 154 aa7.75□□□□□ -1.17
SMG8-205ENST00000580798 KRTAP9-4Q9BYQ2 154 aa7.75□□□□□ -1.17
SMG8-205ENST00000580798 BACH1O14867 736 aa7.74□□□□□ -1.17
SMG8-205ENST00000580798 TRAPPC3LQ5T215 181 aa7.74□□□□□ -1.17
SMG8-205ENST00000580798 EPHA4P54764 986 aa7.73□□□□□ -1.17
SMG8-205ENST00000580798 TXNRD3Q86VQ6 643 aa7.73□□□□□ -1.17
SMG8-205ENST00000580798 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG8-205ENST00000580798 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
SMG8-205ENST00000580798 ZNF358Q9NW07 568 aa7.73□□□□□ -1.17
SMG8-205ENST00000580798 GPC6Q9Y625 555 aaPredicted RBP7.73□□□□□ -1.17
SMG8-205ENST00000580798 A0A0A0MRY4 1105 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 LILRB5O75023 590 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 ELNP15502 786 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 TPRNQ4KMQ1 711 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 TBCELQ5QJ74 424 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 SH3PXD2AQ5TCZ1 1133 aa7.72□□□□□ -1.17
SMG8-205ENST00000580798 NEUROD1Q13562 356 aa7.71□□□□□ -1.18
SMG8-205ENST00000580798 SHISA2Q6UWI4 295 aa7.71□□□□□ -1.18
SMG8-205ENST00000580798 SLC9A9Q8IVB4 645 aa7.71□□□□□ -1.18
SMG8-205ENST00000580798 LENG1Q96BZ8 264 aaPredicted RBP7.71□□□□□ -1.18
SMG8-205ENST00000580798 GDPD2Q9HCC8 539 aa7.71□□□□□ -1.18
SMG8-205ENST00000580798 BRD7Q9NPI1 651 aa7.71□□□□□ -1.18
SMG8-205ENST00000580798 ZNF232Q9UNY5 417 aa7.71□□□□□ -1.18
SMG8-205ENST00000580798 BTBD11A6QL63 1104 aa7.7□□□□□ -1.18
SMG8-205ENST00000580798 GTF2IP78347 998 aa7.7□□□□□ -1.18
SMG8-205ENST00000580798 EML3Q32P44 896 aa7.7□□□□□ -1.18
SMG8-205ENST00000580798 RHPN1Q8TCX5 695 aa7.7□□□□□ -1.18
SMG8-205ENST00000580798 TP53INP1Q96A56 240 aa7.7□□□□□ -1.18
SMG8-205ENST00000580798 SERTM1A2A2V5 107 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 ABL2P42684 1182 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 KCNQ4P56696 695 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 NRG1Q02297 640 aaPredicted RBP7.69□□□□□ -1.18
SMG8-205ENST00000580798 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 TNS4Q8IZW8 715 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 HSH2DQ96JZ2 352 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
SMG8-205ENST00000580798 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
SMG8-205ENST00000580798 PSME1Q06323 249 aa7.68□□□□□ -1.18
SMG8-205ENST00000580798 GOLGA2P5Q9HBQ8 144 aa7.68□□□□□ -1.18
SMG8-205ENST00000580798 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
SMG8-205ENST00000580798 SOX11P35716 441 aa7.67□□□□□ -1.18
SMG8-205ENST00000580798 RAC1P63000 192 aa7.67□□□□□ -1.18
SMG8-205ENST00000580798 TYRO3Q06418 890 aa7.67□□□□□ -1.18
SMG8-205ENST00000580798 BHMTQ93088 406 aa7.67□□□□□ -1.18
SMG8-205ENST00000580798 JPH1Q9HDC5 661 aaPredicted RBP7.67□□□□□ -1.18
SMG8-205ENST00000580798 KCNH4Q9UQ05 1017 aa7.67□□□□□ -1.18
SMG8-205ENST00000580798 SFI1A8K8P3 1242 aa7.66□□□□□ -1.18
SMG8-205ENST00000580798 SKIP12755 728 aa7.66□□□□□ -1.18
SMG8-205ENST00000580798 NUDT8Q8WV74 236 aa7.66□□□□□ -1.18
SMG8-205ENST00000580798 TBC1D8BQ0IIM8 1120 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 NCOA4Q13772 614 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 ILDR2Q71H61 639 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 FMR1NBQ8N0W7 255 aaPredicted RBP7.65□□□□□ -1.18
SMG8-205ENST00000580798 ZNF280CQ8ND82 737 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 UBE2OQ9C0C9 1292 aaKnown RBP7.65□□□□□ -1.18
SMG8-205ENST00000580798 ANKIB1Q9P2G1 1089 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 USP21Q9UK80 565 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 SLC6A14Q9UN76 642 aa7.65□□□□□ -1.18
SMG8-205ENST00000580798 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
SMG8-205ENST00000580798 LZTS3O60299 673 aaPredicted RBP7.64□□□□□ -1.19
SMG8-205ENST00000580798 AFF1P51825 1210 aaKnown RBP7.64□□□□□ -1.19
SMG8-205ENST00000580798 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
SMG8-205ENST00000580798 IGFLR1Q9H665 355 aa7.64□□□□□ -1.19
SMG8-205ENST00000580798 HCN4Q9Y3Q4 1203 aa7.64□□□□□ -1.19
SMG8-205ENST00000580798 PSMA6P60900 246 aaKnown RBP7.63□□□□□ -1.19
SMG8-205ENST00000580798 POTEAQ6S8J7 498 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms