RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 DDNO94850 711 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-217ENST00000580654 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
SMARCE1-217ENST00000580654 TTLL6Q8N841 843 aa10.83□□□□□ -0.68
SMARCE1-217ENST00000580654 COL11A2P13942 1736 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-217ENST00000580654 TMEM88BA6NKF7 163 aa10.82□□□□□ -0.68
SMARCE1-217ENST00000580654 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
SMARCE1-217ENST00000580654 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
SMARCE1-217ENST00000580654 INTS5Q6P9B9 1019 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-217ENST00000580654 RASSF10A6NK89 507 aa10.81□□□□□ -0.68
SMARCE1-217ENST00000580654 MMRN1Q13201 1228 aa10.81□□□□□ -0.68
SMARCE1-217ENST00000580654 NFIXQ14938 502 aa10.81□□□□□ -0.68
SMARCE1-217ENST00000580654 ERFEQ4G0M1 354 aa10.81□□□□□ -0.68
SMARCE1-217ENST00000580654 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
SMARCE1-217ENST00000580654 PTCD1O75127 700 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 LDHDQ86WU2 507 aa10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 C2CD5Q86YS7 1000 aa10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 SLAIN1Q8ND83 568 aa10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 LTBP1Q14766 1721 aa10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 WDR33Q9C0J8 1336 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-217ENST00000580654 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
SMARCE1-217ENST00000580654 DEFB115Q30KQ5 88 aa10.79□□□□□ -0.68
SMARCE1-217ENST00000580654 TAF1DQ9H5J8 278 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-217ENST00000580654 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-217ENST00000580654 WASHC2AQ641Q2 1341 aa10.79□□□□□ -0.68
SMARCE1-217ENST00000580654 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
SMARCE1-217ENST00000580654 ARFGEF2Q9Y6D5 1785 aa10.78□□□□□ -0.68
SMARCE1-217ENST00000580654 C21orf2O43822 256 aa10.78□□□□□ -0.68
SMARCE1-217ENST00000580654 SERPINB2P05120 415 aa10.78□□□□□ -0.68
SMARCE1-217ENST00000580654 MAP2K1Q02750 393 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-217ENST00000580654 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-217ENST00000580654 LTBP3Q9NS15 1303 aa10.78□□□□□ -0.68
SMARCE1-217ENST00000580654 H0YIN7 160 aa10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 ZPR1O75312 459 aa10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 SPNS2Q8IVW8 549 aa10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 NARFQ9UHQ1 456 aa10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 TRIM35Q9UPQ4 493 aa10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.69
SMARCE1-217ENST00000580654 ST20-MTHFSA0A0A6YYL1 179 aa10.76□□□□□ -0.69
SMARCE1-217ENST00000580654 CABP4P57796 275 aa10.76□□□□□ -0.69
SMARCE1-217ENST00000580654 DNAJC10Q8IXB1 793 aa10.76□□□□□ -0.69
SMARCE1-217ENST00000580654 CASP8AP2Q9UKL3 1982 aa10.76□□□□□ -0.69
SMARCE1-217ENST00000580654 IQCA1LA6NCM1 817 aa10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 EIF4A2Q14240 407 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 CARD14Q9BXL6 1004 aa10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 MCOLN1Q9GZU1 580 aa10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 TAOK3Q9H2K8 898 aa10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 TSKSQ9UJT2 592 aa10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 COL15A1P39059 1388 aa10.75□□□□□ -0.69
SMARCE1-217ENST00000580654 HSP90AB1P08238 724 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-217ENST00000580654 EAPPQ56P03 285 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-217ENST00000580654 MAP1SQ66K74 1059 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-217ENST00000580654 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
SMARCE1-217ENST00000580654 NFATC2IPQ8NCF5 419 aa10.74□□□□□ -0.69
SMARCE1-217ENST00000580654 ZNF622Q969S3 477 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMARCE1-217ENST00000580654 TRPM7Q96QT4 1865 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 CYP19A1P11511 503 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 FMR1Q06787 632 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 CNTROBQ8N137 903 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 ZBTB1Q9Y2K1 713 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 SCN7AQ01118 1682 aa10.73□□□□□ -0.69
SMARCE1-217ENST00000580654 CYP4F22Q6NT55 531 aa10.72□□□□□ -0.69
SMARCE1-217ENST00000580654 ZNF530Q6P9A1 599 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-217ENST00000580654 CAPNS2Q96L46 248 aa10.72□□□□□ -0.69
SMARCE1-217ENST00000580654 ABT1Q9ULW3 272 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-217ENST00000580654 EPHX2P34913 555 aa10.71□□□□□ -0.69
SMARCE1-217ENST00000580654 MTHFSP49914 203 aa10.71□□□□□ -0.69
SMARCE1-217ENST00000580654 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-217ENST00000580654 BICDL1Q6ZP65 573 aa10.71□□□□□ -0.69
SMARCE1-217ENST00000580654 BRIP1Q9BX63 1249 aa10.71□□□□□ -0.69
SMARCE1-217ENST00000580654 HACL1Q9UJ83 578 aa10.71□□□□□ -0.69
SMARCE1-217ENST00000580654 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 AOC2O75106 756 aa10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 TBC1D9BQ66K14 1250 aa10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 GPR101Q96P66 508 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 DDX21Q9NR30 783 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMARCE1-217ENST00000580654 PDE6BP35913 854 aa10.69□□□□□ -0.7
SMARCE1-217ENST00000580654 PRPF40BQ6NWY9 871 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-217ENST00000580654 C7orf43Q8WVR3 580 aa10.69□□□□□ -0.7
SMARCE1-217ENST00000580654 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
SMARCE1-217ENST00000580654 PDZRN3Q9UPQ7 1066 aa10.69□□□□□ -0.7
SMARCE1-217ENST00000580654 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
SMARCE1-217ENST00000580654 ECE1P42892 770 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 GRM1Q13255 1194 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 DGKZQ13574 1117 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 AMOTQ4VCS5 1084 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 CST9Q5W186 159 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 PNMA8AQ86V59 439 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 AEBP1Q8IUX7 1158 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 MRC1P22897 1456 aa10.68□□□□□ -0.7
SMARCE1-217ENST00000580654 SRGNP10124 158 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms