RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 NSD2O96028 1365 aa8.72□□□□□ -1.01
KPNB1-209ENST00000580158 NFAT5O94916 1531 aa8.71□□□□□ -1.01
KPNB1-209ENST00000580158 MMP10P09238 476 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 COL9A1P20849 921 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 SSFA2P28290 1259 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 PROX2Q3B8N5 592 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 EPAS1Q99814 870 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 TTC21BQ7Z4L5 1316 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 TTC21AQ8NDW8 1320 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 ZC3H4Q9UPT8 1303 aaKnown RBP8.71□□□□□ -1.02
KPNB1-209ENST00000580158 TOGARAM1Q9Y4F4 1720 aa8.71□□□□□ -1.02
KPNB1-209ENST00000580158 GLTPD2A6NH11 291 aa8.7□□□□□ -1.02
KPNB1-209ENST00000580158 DPEP1P16444 411 aa8.7□□□□□ -1.02
KPNB1-209ENST00000580158 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
KPNB1-209ENST00000580158 ZCRB1Q8TBF4 217 aaKnown RBP8.7□□□□□ -1.02
KPNB1-209ENST00000580158 CNTNAP1P78357 1384 aa8.7□□□□□ -1.02
KPNB1-209ENST00000580158 ITGB4P16144 1822 aa8.69□□□□□ -1.02
KPNB1-209ENST00000580158 DALRD3Q5D0E6 543 aaKnown RBP8.69□□□□□ -1.02
KPNB1-209ENST00000580158 SMIM5Q71RC9 77 aa8.69□□□□□ -1.02
KPNB1-209ENST00000580158 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
KPNB1-209ENST00000580158 PALLDQ8WX93 1383 aa8.69□□□□□ -1.02
KPNB1-209ENST00000580158 CAMK2BQ13554 666 aa8.68□□□□□ -1.02
KPNB1-209ENST00000580158 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
KPNB1-209ENST00000580158 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
KPNB1-209ENST00000580158 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
KPNB1-209ENST00000580158 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
KPNB1-209ENST00000580158 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
KPNB1-209ENST00000580158 DPYSL4O14531 572 aa8.67□□□□□ -1.02
KPNB1-209ENST00000580158 RGPD2P0DJD1 1756 aa8.67□□□□□ -1.02
KPNB1-209ENST00000580158 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
KPNB1-209ENST00000580158 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
KPNB1-209ENST00000580158 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
KPNB1-209ENST00000580158 PARP3Q9Y6F1 533 aa8.67□□□□□ -1.02
KPNB1-209ENST00000580158 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 VEGFBP49765 207 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 TMF1P82094 1093 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 MPRIPQ6WCQ1 1025 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 LTV1Q96GA3 475 aaPredicted RBP8.66□□□□□ -1.02
KPNB1-209ENST00000580158 BEGAINQ9BUH8 593 aa8.66□□□□□ -1.02
KPNB1-209ENST00000580158 CENPJQ9HC77 1338 aaPredicted RBP8.65□□□□□ -1.02
KPNB1-209ENST00000580158 DICER1Q9UPY3 1922 aaKnown RBP8.65□□□□□ -1.02
KPNB1-209ENST00000580158 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
KPNB1-209ENST00000580158 GNPATO15228 680 aa8.65□□□□□ -1.02
KPNB1-209ENST00000580158 LMNB1P20700 586 aa8.65□□□□□ -1.02
KPNB1-209ENST00000580158 KCNA3P22001 575 aa8.65□□□□□ -1.02
KPNB1-209ENST00000580158 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
KPNB1-209ENST00000580158 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
KPNB1-209ENST00000580158 KTN1Q86UP2 1357 aaKnown RBP8.64□□□□□ -1.03
KPNB1-209ENST00000580158 BCAMP50895 628 aa8.64□□□□□ -1.03
KPNB1-209ENST00000580158 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
KPNB1-209ENST00000580158 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
KPNB1-209ENST00000580158 CASP8AP2Q9UKL3 1982 aa8.64□□□□□ -1.03
KPNB1-209ENST00000580158 CGNL1Q0VF96 1302 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 EVC2Q86UK5 1308 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 DEFB115Q30KQ5 88 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
KPNB1-209ENST00000580158 IP6K1Q92551 441 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 DDX12PQ92771 950 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 IRX2Q9BZI1 471 aaPredicted RBP8.63□□□□□ -1.03
KPNB1-209ENST00000580158 MAP2P11137 1827 aaKnown RBP8.63□□□□□ -1.03
KPNB1-209ENST00000580158 MON2Q7Z3U7 1717 aa8.63□□□□□ -1.03
KPNB1-209ENST00000580158 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
KPNB1-209ENST00000580158 RASSF7Q02833 373 aa8.62□□□□□ -1.03
KPNB1-209ENST00000580158 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
KPNB1-209ENST00000580158 RTCBQ9Y3I0 505 aaKnown RBP8.62□□□□□ -1.03
KPNB1-209ENST00000580158 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 POTECB2RU33 542 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
KPNB1-209ENST00000580158 RFC4P35249 363 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 SIK1P57059 783 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 LINC00116Q8NCU8 138 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 RAPGEF4Q8WZA2 1011 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
KPNB1-209ENST00000580158 KDM6AO15550 1401 aaPredicted RBP8.61□□□□□ -1.03
KPNB1-209ENST00000580158 SCN4AP35499 1836 aa8.61□□□□□ -1.03
KPNB1-209ENST00000580158 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
KPNB1-209ENST00000580158 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
KPNB1-209ENST00000580158 WDR33Q9C0J8 1336 aaKnown RBP8.6□□□□□ -1.03
KPNB1-209ENST00000580158 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
KPNB1-209ENST00000580158 TNRC18O15417 2968 aaPredicted RBP8.6□□□□□ -1.03
KPNB1-209ENST00000580158 MEGF6O75095 1541 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 PASKQ96RG2 1323 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 RASSF10A6NK89 507 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 CHRNA5P30532 468 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 PACS2Q86VP3 889 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 GCC1Q96CN9 775 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
KPNB1-209ENST00000580158 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
KPNB1-209ENST00000580158 GYS1P13807 737 aa8.58□□□□□ -1.04
KPNB1-209ENST00000580158 AMPHP49418 695 aa8.58□□□□□ -1.04
KPNB1-209ENST00000580158 KCNC4Q03721 635 aa8.58□□□□□ -1.04
KPNB1-209ENST00000580158 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
KPNB1-209ENST00000580158 NME9Q86XW9 330 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms