RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
SMARCD2-208ENST00000580054 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.37
SMARCD2-208ENST00000580054 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 SRGNP10124 158 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 EPHX2P34913 555 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 OLFM4Q6UX06 510 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 CNBD1Q8NA66 436 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 ZNF277Q9NRM2 450 aaPredicted RBP12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 HACL1Q9UJ83 578 aa12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 ABT1Q9ULW3 272 aaKnown RBP12.7□□□□□ -0.38
SMARCD2-208ENST00000580054 A0A087WZG4 1122 aa12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 MAP2K1Q02750 393 aaPredicted RBP12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 FMR1Q06787 632 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
SMARCD2-208ENST00000580054 COL4A5P29400 1685 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 NPHP1O15259 732 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 HMOX1P09601 288 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 RGS19P49795 217 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
SMARCD2-208ENST00000580054 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 STARD3NLO95772 234 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 ST5P78524 1137 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 GRM1Q13255 1194 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 MTHFSDQ2M296 383 aaKnown RBP12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 PANK3Q9H999 370 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
SMARCD2-208ENST00000580054 CYP4F22Q6NT55 531 aa12.66□□□□□ -0.38
SMARCD2-208ENST00000580054 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
SMARCD2-208ENST00000580054 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
SMARCD2-208ENST00000580054 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
SMARCD2-208ENST00000580054 A1BGP04217 495 aa12.65□□□□□ -0.38
SMARCD2-208ENST00000580054 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
SMARCD2-208ENST00000580054 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
SMARCD2-208ENST00000580054 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
SMARCD2-208ENST00000580054 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMARCD2-208ENST00000580054 SNED1Q8TER0 1413 aa12.64□□□□□ -0.39
SMARCD2-208ENST00000580054 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
SMARCD2-208ENST00000580054 PNMA8AQ86V59 439 aaPredicted RBP12.64□□□□□ -0.39
SMARCD2-208ENST00000580054 FZD9O00144 591 aa12.63□□□□□ -0.39
SMARCD2-208ENST00000580054 TRAF5O00463 557 aa12.63□□□□□ -0.39
SMARCD2-208ENST00000580054 AOC2O75106 756 aa12.63□□□□□ -0.39
SMARCD2-208ENST00000580054 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
SMARCD2-208ENST00000580054 GPR101Q96P66 508 aaPredicted RBP12.63□□□□□ -0.39
SMARCD2-208ENST00000580054 MCOLN1Q9GZU1 580 aa12.63□□□□□ -0.39
SMARCD2-208ENST00000580054 NPR1P16066 1061 aa12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 DZIP3Q86Y13 1208 aaKnown RBP12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 GPC2Q8N158 579 aa12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
SMARCD2-208ENST00000580054 ECE1P42892 770 aa12.61□□□□□ -0.39
SMARCD2-208ENST00000580054 CST9Q5W186 159 aa12.61□□□□□ -0.39
SMARCD2-208ENST00000580054 SLC51AQ86UW1 340 aa12.61□□□□□ -0.39
SMARCD2-208ENST00000580054 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
SMARCD2-208ENST00000580054 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
SMARCD2-208ENST00000580054 GJA3Q9Y6H8 435 aa12.61□□□□□ -0.39
SMARCD2-208ENST00000580054 KCNQ3O43525 872 aa12.6□□□□□ -0.39
SMARCD2-208ENST00000580054 EPS15P42566 896 aa12.6□□□□□ -0.39
SMARCD2-208ENST00000580054 SCNN1DP51172 638 aa12.6□□□□□ -0.39
SMARCD2-208ENST00000580054 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
SMARCD2-208ENST00000580054 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
SMARCD2-208ENST00000580054 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
SMARCD2-208ENST00000580054 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
SMARCD2-208ENST00000580054 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
SMARCD2-208ENST00000580054 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
SMARCD2-208ENST00000580054 TLL2Q9Y6L7 1015 aa12.59□□□□□ -0.39
SMARCD2-208ENST00000580054 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
SMARCD2-208ENST00000580054 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
SMARCD2-208ENST00000580054 TEFQ10587 303 aa12.58□□□□□ -0.4
SMARCD2-208ENST00000580054 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
SMARCD2-208ENST00000580054 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
SMARCD2-208ENST00000580054 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 DGKZQ13574 1117 aa12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 PSMD1Q99460 953 aa12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 NIP7Q9Y221 180 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 COL3A1P02461 1466 aaPredicted RBP12.57□□□□□ -0.4
SMARCD2-208ENST00000580054 NUP98P52948 1817 aa12.56□□□□□ -0.4
SMARCD2-208ENST00000580054 HSPA5P11021 654 aaKnown RBP12.56□□□□□ -0.4
SMARCD2-208ENST00000580054 MAP2K2P36507 400 aa12.56□□□□□ -0.4
SMARCD2-208ENST00000580054 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMARCD2-208ENST00000580054 CLSPNQ9HAW4 1339 aa12.56□□□□□ -0.4
SMARCD2-208ENST00000580054 GNAT3A8MTJ3 354 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 TPTE2Q6XPS3 522 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms