RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
PCAT18-201ENST00000579458 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.87□□□□□ -0.51
PCAT18-201ENST00000579458 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
PCAT18-201ENST00000579458 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
PCAT18-201ENST00000579458 SEC13P55735 322 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
PCAT18-201ENST00000579458 QPCTQ16769 361 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 HELQQ8TDG4 1101 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 POLG2Q9UHN1 485 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 ERCC6L2Q5T890 1561 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 TSPAN6O43657 245 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 RNF34Q969K3 372 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 KMT5AQ9NQR1 393 aa11.86□□□□□ -0.51
PCAT18-201ENST00000579458 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 CLCN1P35523 988 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 WASHC5Q12768 1159 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 RASA1P20936 1047 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 PDE3BQ13370 1112 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
PCAT18-201ENST00000579458 ERAP2Q6P179 960 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 FRMD6Q96NE9 622 aa11.85□□□□□ -0.51
PCAT18-201ENST00000579458 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
PCAT18-201ENST00000579458 ERICH4A6NGS2 130 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 ZKSCAN8Q15776 578 aaPredicted RBP11.84□□□□□ -0.51
PCAT18-201ENST00000579458 PLEKHG4Q58EX7 1191 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 BRDTQ58F21 947 aaPredicted RBP11.84□□□□□ -0.51
PCAT18-201ENST00000579458 RNF217Q8TC41 542 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 INPP5FQ9Y2H2 1132 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 RACK1P63244 317 aaKnown RBP11.84□□□□□ -0.51
PCAT18-201ENST00000579458 SEPT2Q15019 361 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 SHROOM2Q13796 1616 aa11.84□□□□□ -0.51
PCAT18-201ENST00000579458 PES1O00541 588 aaKnown RBP11.83□□□□□ -0.52
PCAT18-201ENST00000579458 MAP3K7O43318 606 aa11.83□□□□□ -0.52
PCAT18-201ENST00000579458 ECM1Q16610 540 aa11.83□□□□□ -0.52
PCAT18-201ENST00000579458 NFE2Q16621 373 aaPredicted RBP11.83□□□□□ -0.52
PCAT18-201ENST00000579458 CRTC2Q53ET0 693 aaPredicted RBP11.83□□□□□ -0.52
PCAT18-201ENST00000579458 ZCCHC8Q6NZY4 707 aaKnown RBP11.83□□□□□ -0.52
PCAT18-201ENST00000579458 E2F7Q96AV8 911 aa11.83□□□□□ -0.52
PCAT18-201ENST00000579458 A6NJY4 79 aa11.83□□□□□ -0.52
PCAT18-201ENST00000579458 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
PCAT18-201ENST00000579458 TYW1Q9NV66 732 aaKnown RBP11.83□□□□□ -0.52
PCAT18-201ENST00000579458 LILRB3O75022 631 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 HMMRO75330 724 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 GEMIN4P57678 1058 aaKnown RBP11.82□□□□□ -0.52
PCAT18-201ENST00000579458 GRAMD1BQ3KR37 738 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 CAND2O75155 1236 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 FGRP09769 529 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
PCAT18-201ENST00000579458 MFSD4BQ5TF39 518 aa11.82□□□□□ -0.52
PCAT18-201ENST00000579458 CCDC163A0A0D9SF12 145 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 TRIM64CA6NLI5 447 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 KIF3BO15066 747 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 SCGB1D2O95969 90 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 PSMC1P62191 440 aaKnown RBP11.81□□□□□ -0.52
PCAT18-201ENST00000579458 NELL2Q99435 816 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
PCAT18-201ENST00000579458 TMEM63CQ9P1W3 806 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 DAAM1Q9Y4D1 1078 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 FCHSD2O94868 740 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
PCAT18-201ENST00000579458 ELOAQ14241 798 aaKnown RBP11.81□□□□□ -0.52
PCAT18-201ENST00000579458 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
PCAT18-201ENST00000579458 OSBPP22059 807 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
PCAT18-201ENST00000579458 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
PCAT18-201ENST00000579458 HDGFL2Q7Z4V5 671 aaPredicted RBP11.8□□□□□ -0.52
PCAT18-201ENST00000579458 SLF2Q8IX21 1173 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 KIF27Q86VH2 1401 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 ACBD5Q5T8D3 534 aaPredicted RBP11.8□□□□□ -0.52
PCAT18-201ENST00000579458 NUTM2GQ5VZR2 741 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 SLC4A10Q6U841 1118 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 PRM3Q9NNZ6 103 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
PCAT18-201ENST00000579458 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
PCAT18-201ENST00000579458 MYL1P05976 194 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 TEX19Q8NA77 164 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 PDGFDQ9GZP0 370 aaPredicted RBP11.79□□□□□ -0.52
PCAT18-201ENST00000579458 TMCC3Q9ULS5 477 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 MYL3P08590 195 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 NDUFAF2Q8N183 169 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 ATRIPQ8WXE1 791 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
PCAT18-201ENST00000579458 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
PCAT18-201ENST00000579458 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
PCAT18-201ENST00000579458 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms